RNA–Protein interactions for RNA: ENST00000399601.5

CACNA1C-208, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-208ENST00000399601 SNW1Q13573 536 aaKnown RBP12.51□□□□□ -0.41
CACNA1C-208ENST00000399601 NR1I2O75469 434 aa12.51□□□□□ -0.41
CACNA1C-208ENST00000399601 GADL1Q6ZQY3 521 aa12.51□□□□□ -0.41
CACNA1C-208ENST00000399601 ZNF830Q96NB3 372 aaPredicted RBP12.51□□□□□ -0.41
CACNA1C-208ENST00000399601 DDX41Q9UJV9 622 aaKnown RBP12.51□□□□□ -0.41
CACNA1C-208ENST00000399601 JAG2Q9Y219 1238 aa12.51□□□□□ -0.41
CACNA1C-208ENST00000399601 GOLIM4O00461 696 aa12.51□□□□□ -0.41
CACNA1C-208ENST00000399601 FBXW4P57775 412 aa12.51□□□□□ -0.41
CACNA1C-208ENST00000399601 COG7P83436 770 aa12.51□□□□□ -0.41
CACNA1C-208ENST00000399601 ZYXQ15942 572 aaKnown RBP12.51□□□□□ -0.41
CACNA1C-208ENST00000399601 DCLK2Q8N568 766 aa12.51□□□□□ -0.41
CACNA1C-208ENST00000399601 PDZD8Q8NEN9 1154 aa12.51□□□□□ -0.41
CACNA1C-208ENST00000399601 DNAJC5BQ9UF47 199 aa12.51□□□□□ -0.41
CACNA1C-208ENST00000399601 ATF5Q9Y2D1 282 aaPredicted RBP12.51□□□□□ -0.41
CACNA1C-208ENST00000399601 PPFIA2O75334 1257 aa12.51□□□□□ -0.41
CACNA1C-208ENST00000399601 TRIM68Q6AZZ1 485 aa12.51□□□□□ -0.41
CACNA1C-208ENST00000399601 NFKBIL1Q9UBC1 381 aaPredicted RBP12.51□□□□□ -0.41
CACNA1C-208ENST00000399601 PDZRN3Q9UPQ7 1066 aa12.51□□□□□ -0.41
CACNA1C-208ENST00000399601 NCOA2Q15596 1464 aa12.5□□□□□ -0.41
CACNA1C-208ENST00000399601 HPDP32754 393 aaPredicted RBP12.5□□□□□ -0.41
CACNA1C-208ENST00000399601 MIER3Q7Z3K6 550 aa12.5□□□□□ -0.41
CACNA1C-208ENST00000399601 PAGR1Q9BTK6 254 aa12.5□□□□□ -0.41
CACNA1C-208ENST00000399601 K7ELQ4 463 aaPredicted RBP12.5□□□□□ -0.41
CACNA1C-208ENST00000399601 RAP1GDS1P52306 607 aa12.5□□□□□ -0.41
CACNA1C-208ENST00000399601 TBC1D31Q96DN5 1066 aa12.5□□□□□ -0.41
CACNA1C-208ENST00000399601 TRIM35Q9UPQ4 493 aa12.5□□□□□ -0.41
CACNA1C-208ENST00000399601 VGLL3A8MV65 326 aa12.5□□□□□ -0.41
CACNA1C-208ENST00000399601 SPDL1Q96EA4 605 aa12.5□□□□□ -0.41
CACNA1C-208ENST00000399601 ANO3Q9BYT9 981 aa12.5□□□□□ -0.41
CACNA1C-208ENST00000399601 ADAMTS8Q9UP79 889 aa12.5□□□□□ -0.41
CACNA1C-208ENST00000399601 IGF1RP08069 1367 aa12.5□□□□□ -0.41
CACNA1C-208ENST00000399601 PPP2R1AP30153 589 aa12.5□□□□□ -0.41
CACNA1C-208ENST00000399601 AFMP43652 599 aa12.5□□□□□ -0.41
CACNA1C-208ENST00000399601 MAP3K7CLP57077 242 aa12.5□□□□□ -0.41
CACNA1C-208ENST00000399601 GNG11P61952 73 aa12.5□□□□□ -0.41
CACNA1C-208ENST00000399601 LACTBP83111 547 aaPredicted RBP12.5□□□□□ -0.41
CACNA1C-208ENST00000399601 AMPD3Q01432 767 aa12.5□□□□□ -0.41
CACNA1C-208ENST00000399601 LRRC23Q53EV4 343 aaPredicted RBP12.5□□□□□ -0.41
CACNA1C-208ENST00000399601 KRT5P13647 590 aa12.5□□□□□ -0.41
CACNA1C-208ENST00000399601 KIF1BPQ96EK5 621 aa12.5□□□□□ -0.41
CACNA1C-208ENST00000399601 ZFYVE1Q9HBF4 777 aa12.5□□□□□ -0.41
CACNA1C-208ENST00000399601 MKL2Q9ULH7 1088 aa12.5□□□□□ -0.41
CACNA1C-208ENST00000399601 ZBBXA8MT70 800 aa12.49□□□□□ -0.41
CACNA1C-208ENST00000399601 DAPK3O43293 454 aa12.49□□□□□ -0.41
CACNA1C-208ENST00000399601 RNASE9P60153 205 aaKnown RBP12.49□□□□□ -0.41
CACNA1C-208ENST00000399601 PDCD2Q16342 344 aaPredicted RBP12.49□□□□□ -0.41
CACNA1C-208ENST00000399601 UTP14CQ5TAP6 766 aaKnown RBP12.49□□□□□ -0.41
CACNA1C-208ENST00000399601 FLAD1Q8NFF5 587 aa12.49□□□□□ -0.41
CACNA1C-208ENST00000399601 RNF8O76064 485 aa12.49□□□□□ -0.41
CACNA1C-208ENST00000399601 TMEM67Q5HYA8 995 aa12.49□□□□□ -0.41
CACNA1C-208ENST00000399601 UBE3BQ7Z3V4 1068 aa12.49□□□□□ -0.41
CACNA1C-208ENST00000399601 WDR48Q8TAF3 677 aa12.49□□□□□ -0.41
CACNA1C-208ENST00000399601 CAPN15O75808 1086 aa12.49□□□□□ -0.41
CACNA1C-208ENST00000399601 LDHBP07195 334 aaKnown RBP12.49□□□□□ -0.41
CACNA1C-208ENST00000399601 FAM193BQ96PV7 902 aaPredicted RBP12.49□□□□□ -0.41
CACNA1C-208ENST00000399601 TACO1Q9BSH4 297 aaKnown RBP12.49□□□□□ -0.41
CACNA1C-208ENST00000399601 TRPC5Q9UL62 973 aaPredicted RBP12.49□□□□□ -0.41
CACNA1C-208ENST00000399601 SPDYE2BA6NHP3 402 aa12.49□□□□□ -0.41
CACNA1C-208ENST00000399601 SPDYE6P0CI01 402 aa12.49□□□□□ -0.41
CACNA1C-208ENST00000399601 GBP1P32455 592 aa12.49□□□□□ -0.41
CACNA1C-208ENST00000399601 NXNQ6DKJ4 435 aa12.49□□□□□ -0.41
CACNA1C-208ENST00000399601 RAB3IPQ96QF0 476 aaPredicted RBP12.49□□□□□ -0.41
CACNA1C-208ENST00000399601 ARHGEF10LQ9HCE6 1279 aa12.49□□□□□ -0.41
CACNA1C-208ENST00000399601 PKD2L1Q9P0L9 805 aa12.49□□□□□ -0.41
CACNA1C-208ENST00000399601 SAMD15Q9P1V8 674 aa12.49□□□□□ -0.41
CACNA1C-208ENST00000399601 PHEXP78562 749 aa12.49□□□□□ -0.41
CACNA1C-208ENST00000399601 PPP2R5AQ15172 486 aa12.49□□□□□ -0.41
CACNA1C-208ENST00000399601 GPIHBP1Q8IV16 184 aa12.49□□□□□ -0.41
CACNA1C-208ENST00000399601 LUC7L2Q9Y383 392 aaKnown RBP12.49□□□□□ -0.41
CACNA1C-208ENST00000399601 SYNDIG1LA6NDD5 238 aa12.48□□□□□ -0.41
CACNA1C-208ENST00000399601 HEATR3Q7Z4Q2 680 aa12.48□□□□□ -0.41
CACNA1C-208ENST00000399601 USP48Q86UV5 1035 aa12.48□□□□□ -0.41
CACNA1C-208ENST00000399601 KCTD17Q8N5Z5 321 aa12.48□□□□□ -0.41
CACNA1C-208ENST00000399601 ZSCAN31Q96LW9 406 aaPredicted RBP12.48□□□□□ -0.41
CACNA1C-208ENST00000399601 EXOC1Q9NV70 894 aa12.48□□□□□ -0.41
CACNA1C-208ENST00000399601 ZSCAN32Q9NX65 697 aa12.48□□□□□ -0.41
CACNA1C-208ENST00000399601 RNF169Q8NCN4 708 aa12.48□□□□□ -0.41
CACNA1C-208ENST00000399601 TRIM47Q96LD4 638 aa12.48□□□□□ -0.41
CACNA1C-208ENST00000399601 SYNJ1O43426 1573 aa12.48□□□□□ -0.41
CACNA1C-208ENST00000399601 KAT6BQ8WYB5 2073 aa12.48□□□□□ -0.41
CACNA1C-208ENST00000399601 GOLGA1Q92805 767 aa12.48□□□□□ -0.41
CACNA1C-208ENST00000399601 CCDC77Q9BR77 488 aa12.48□□□□□ -0.41
CACNA1C-208ENST00000399601 SCHIP1Q9P0W5 487 aaPredicted RBP12.48□□□□□ -0.41
CACNA1C-208ENST00000399601 USP25Q9UHP3 1055 aa12.48□□□□□ -0.41
CACNA1C-208ENST00000399601 GGA1Q9UJY5 639 aa12.48□□□□□ -0.41
CACNA1C-208ENST00000399601 STK38LQ9Y2H1 464 aa12.48□□□□□ -0.41
CACNA1C-208ENST00000399601 HFM1A2PYH4 1435 aa12.48□□□□□ -0.41
CACNA1C-208ENST00000399601 IVLP07476 585 aa12.48□□□□□ -0.41
CACNA1C-208ENST00000399601 ALDH1B1P30837 517 aa12.48□□□□□ -0.41
CACNA1C-208ENST00000399601 CACNA2D3Q8IZS8 1091 aa12.48□□□□□ -0.41
CACNA1C-208ENST00000399601 POMGNT1Q8WZA1 660 aa12.48□□□□□ -0.41
CACNA1C-208ENST00000399601 SELENOOQ9BVL4 669 aa12.48□□□□□ -0.41
CACNA1C-208ENST00000399601 OLA1Q9NTK5 396 aaKnown RBP12.48□□□□□ -0.41
CACNA1C-208ENST00000399601 GIPC1O14908 333 aa12.48□□□□□ -0.41
CACNA1C-208ENST00000399601 OPHN1O60890 802 aa12.48□□□□□ -0.41
CACNA1C-208ENST00000399601 FOSL2P15408 326 aa12.48□□□□□ -0.41
CACNA1C-208ENST00000399601 PABPC4Q13310 644 aaKnown RBP eCLIP12.48□□□□□ -0.41
CACNA1C-208ENST00000399601 NBPF1Q3BBV0 1214 aa12.48□□□□□ -0.41
CACNA1C-208ENST00000399601 SLC4A4Q9Y6R1 1079 aa12.48□□□□□ -0.41
CACNA1C-208ENST00000399601 ZBED4O75132 1171 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms