RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 GUCY1B3Q02153 619 aa13.84□□□□□ -0.19
COL25A1-202ENST00000399127 UBE3CQ15386 1083 aa13.84□□□□□ -0.19
COL25A1-202ENST00000399127 CLEC4GQ6UXB4 293 aa13.84□□□□□ -0.19
COL25A1-202ENST00000399127 RALYLQ86SE5 291 aaKnown RBP13.84□□□□□ -0.19
COL25A1-202ENST00000399127 SMAP1Q8IYB5 467 aaPredicted RBP13.84□□□□□ -0.19
COL25A1-202ENST00000399127 SMARCC2Q8TAQ2 1214 aa13.84□□□□□ -0.19
COL25A1-202ENST00000399127 AIDAQ96BJ3 306 aa13.84□□□□□ -0.19
COL25A1-202ENST00000399127 TSPY26PQ9H489 355 aa13.84□□□□□ -0.19
COL25A1-202ENST00000399127 SBF2Q86WG5 1849 aa13.84□□□□□ -0.19
COL25A1-202ENST00000399127 TCRBV5S4A2TA0A5A2 114 aa13.84□□□□□ -0.19
COL25A1-202ENST00000399127 RFC4P35249 363 aa13.84□□□□□ -0.19
COL25A1-202ENST00000399127 ANTXR2P58335 489 aa13.84□□□□□ -0.19
COL25A1-202ENST00000399127 CSPP1Q1MSJ5 1256 aa13.84□□□□□ -0.19
COL25A1-202ENST00000399127 CCDC183Q5T5S1 534 aa13.84□□□□□ -0.19
COL25A1-202ENST00000399127 MB21D2Q8IYB1 491 aaPredicted RBP13.84□□□□□ -0.19
COL25A1-202ENST00000399127 NARFQ9UHQ1 456 aa13.84□□□□□ -0.19
COL25A1-202ENST00000399127 BRWD3Q6RI45 1802 aa13.83□□□□□ -0.2
COL25A1-202ENST00000399127 ESPNB1AK53 854 aa13.83□□□□□ -0.2
COL25A1-202ENST00000399127 MCM5P33992 734 aa13.83□□□□□ -0.2
COL25A1-202ENST00000399127 CEBPZQ03701 1054 aaKnown RBP13.83□□□□□ -0.2
COL25A1-202ENST00000399127 CCDC173Q0VFZ6 552 aa13.83□□□□□ -0.2
COL25A1-202ENST00000399127 TRAPPC3LQ5T215 181 aa13.83□□□□□ -0.2
COL25A1-202ENST00000399127 TBC1D10CQ8IV04 446 aa13.83□□□□□ -0.2
COL25A1-202ENST00000399127 NCOA7Q8NI08 942 aa13.83□□□□□ -0.2
COL25A1-202ENST00000399127 INCENPQ9NQS7 918 aa13.83□□□□□ -0.2
COL25A1-202ENST00000399127 CICQ96RK0 1608 aaPredicted RBP13.83□□□□□ -0.2
COL25A1-202ENST00000399127 KLF18A0A0U1RQI7 1052 aa13.83□□□□□ -0.2
COL25A1-202ENST00000399127 MBD4O95243 580 aa13.83□□□□□ -0.2
COL25A1-202ENST00000399127 SPATA32Q96LK8 384 aa13.83□□□□□ -0.2
COL25A1-202ENST00000399127 ARMT1Q9H993 441 aa13.83□□□□□ -0.2
COL25A1-202ENST00000399127 BCL2L12Q9HB09 334 aa13.83□□□□□ -0.2
COL25A1-202ENST00000399127 NPHP1O15259 732 aa13.82□□□□□ -0.2
COL25A1-202ENST00000399127 GYG1P46976 350 aa13.82□□□□□ -0.2
COL25A1-202ENST00000399127 MAP3K12Q12852 859 aa13.82□□□□□ -0.2
COL25A1-202ENST00000399127 GIMAP6Q6P9H5 292 aa13.82□□□□□ -0.2
COL25A1-202ENST00000399127 ZNF274Q96GC6 653 aaPredicted RBP13.82□□□□□ -0.2
COL25A1-202ENST00000399127 SETDB2Q96T68 719 aa13.82□□□□□ -0.2
COL25A1-202ENST00000399127 LLPHQ9BRT6 129 aaKnown RBP13.82□□□□□ -0.2
COL25A1-202ENST00000399127 TAOK2Q9UL54 1235 aa13.82□□□□□ -0.2
COL25A1-202ENST00000399127 GOLGA8BA8MQT2 603 aa13.82□□□□□ -0.2
COL25A1-202ENST00000399127 RESTQ13127 1097 aa13.82□□□□□ -0.2
COL25A1-202ENST00000399127 STRBPQ96SI9 672 aaKnown RBP13.82□□□□□ -0.2
COL25A1-202ENST00000399127 CDC5LQ99459 802 aaKnown RBP13.82□□□□□ -0.2
COL25A1-202ENST00000399127 ANKRD18AQ8IVF6 992 aa13.81□□□□□ -0.2
COL25A1-202ENST00000399127 STK11IPQ8N1F8 1099 aa13.81□□□□□ -0.2
COL25A1-202ENST00000399127 MIGA1Q8NAN2 632 aa13.81□□□□□ -0.2
COL25A1-202ENST00000399127 CELF1Q92879 486 aaKnown RBP13.81□□□□□ -0.2
COL25A1-202ENST00000399127 PPP1R9BQ96SB3 815 aa13.81□□□□□ -0.2
COL25A1-202ENST00000399127 FTOQ9C0B1 505 aaKnown RBP eCLIP13.81□□□□□ -0.2
COL25A1-202ENST00000399127 ZNF831Q5JPB2 1677 aa13.81□□□□□ -0.2
COL25A1-202ENST00000399127 ARAP2Q8WZ64 1704 aa13.81□□□□□ -0.2
COL25A1-202ENST00000399127 PRKAB2O43741 272 aa13.81□□□□□ -0.2
COL25A1-202ENST00000399127 LIG1P18858 919 aa13.81□□□□□ -0.2
COL25A1-202ENST00000399127 TRDNQ13061 729 aa13.81□□□□□ -0.2
COL25A1-202ENST00000399127 LEO1Q8WVC0 666 aaPredicted RBP13.81□□□□□ -0.2
COL25A1-202ENST00000399127 EPB41L4AQ9HCS5 686 aaPredicted RBP13.81□□□□□ -0.2
COL25A1-202ENST00000399127 LRP2BPQ9P2M1 347 aa13.81□□□□□ -0.2
COL25A1-202ENST00000399127 ABCF2Q9UG63 623 aa13.81□□□□□ -0.2
COL25A1-202ENST00000399127 BCORQ6W2J9 1755 aa13.8□□□□□ -0.2
COL25A1-202ENST00000399127 RTL9Q8NET4 1388 aa13.8□□□□□ -0.2
COL25A1-202ENST00000399127 GOLGA6L4A6NEF3 574 aa13.8□□□□□ -0.2
COL25A1-202ENST00000399127 B4E1Z4 1266 aa13.8□□□□□ -0.2
COL25A1-202ENST00000399127 RXRAP19793 462 aa13.8□□□□□ -0.2
COL25A1-202ENST00000399127 CAMK4Q16566 473 aa13.8□□□□□ -0.2
COL25A1-202ENST00000399127 OTUD7BQ6GQQ9 843 aa13.8□□□□□ -0.2
COL25A1-202ENST00000399127 CYB5R4Q7L1T6 521 aa13.8□□□□□ -0.2
COL25A1-202ENST00000399127 NBPF5PQ86XG9 351 aaPredicted RBP13.8□□□□□ -0.2
COL25A1-202ENST00000399127 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.8□□□□□ -0.2
COL25A1-202ENST00000399127 APBA3O96018 575 aa13.8□□□□□ -0.2
COL25A1-202ENST00000399127 FDPSP14324 419 aaKnown RBP13.8□□□□□ -0.2
COL25A1-202ENST00000399127 HMGN5P82970 282 aaKnown RBP13.8□□□□□ -0.2
COL25A1-202ENST00000399127 CTDSPL2Q05D32 466 aa13.8□□□□□ -0.2
COL25A1-202ENST00000399127 SCAND2PQ9GZW5 306 aaPredicted RBP13.8□□□□□ -0.2
COL25A1-202ENST00000399127 HPS5Q9UPZ3 1129 aa13.8□□□□□ -0.2
COL25A1-202ENST00000399127 NEDD4P46934 1319 aa13.79□□□□□ -0.2
COL25A1-202ENST00000399127 SALL1Q9NSC2 1324 aa13.79□□□□□ -0.2
COL25A1-202ENST00000399127 LAMB2P55268 1798 aa13.79□□□□□ -0.2
COL25A1-202ENST00000399127 TXNRD1Q16881 649 aa13.79□□□□□ -0.2
COL25A1-202ENST00000399127 IFNL3Q8IZI9 196 aa13.79□□□□□ -0.2
COL25A1-202ENST00000399127 LCORLQ8N3X6 602 aa13.79□□□□□ -0.2
COL25A1-202ENST00000399127 SENP2Q9HC62 589 aa13.79□□□□□ -0.2
COL25A1-202ENST00000399127 GJB4Q9NTQ9 266 aa13.79□□□□□ -0.2
COL25A1-202ENST00000399127 CARMIL3Q8ND23 1372 aa13.79□□□□□ -0.2
COL25A1-202ENST00000399127 LY75O60449 1722 aa13.79□□□□□ -0.2
COL25A1-202ENST00000399127 NAPBQ9H115 298 aa13.79□□□□□ -0.2
COL25A1-202ENST00000399127 ELP1O95163 1332 aa13.78□□□□□ -0.2
COL25A1-202ENST00000399127 KDM4AO75164 1064 aa13.78□□□□□ -0.2
COL25A1-202ENST00000399127 EVCP57679 992 aa13.78□□□□□ -0.2
COL25A1-202ENST00000399127 SF3B3Q15393 1217 aaKnown RBP13.78□□□□□ -0.2
COL25A1-202ENST00000399127 SLC27A3Q5K4L6 730 aa13.78□□□□□ -0.2
COL25A1-202ENST00000399127 CCDC144CPQ8IYA2 1237 aa13.78□□□□□ -0.2
COL25A1-202ENST00000399127 MINPP1Q9UNW1 487 aa13.78□□□□□ -0.2
COL25A1-202ENST00000399127 C4BP0C0L5 1744 aa13.78□□□□□ -0.2
COL25A1-202ENST00000399127 PATL2C9JE40 543 aaKnown RBP13.78□□□□□ -0.2
COL25A1-202ENST00000399127 KLRK1P26718 216 aa13.78□□□□□ -0.2
COL25A1-202ENST00000399127 ADGRA1Q86SQ6 560 aa13.78□□□□□ -0.2
COL25A1-202ENST00000399127 VPS37DQ86XT2 251 aa13.78□□□□□ -0.2
COL25A1-202ENST00000399127 FBXL16Q8N461 479 aa13.78□□□□□ -0.2
COL25A1-202ENST00000399127 PGBD1Q96JS3 809 aa13.78□□□□□ -0.2
COL25A1-202ENST00000399127 MAP7D2Q96T17 732 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms