RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 DHX58Q96C10 678 aa9.43□□□□□ -0.9
SPTLC3-201ENST00000399002 VAT1LQ9HCJ6 419 aa9.43□□□□□ -0.9
SPTLC3-201ENST00000399002 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.43□□□□□ -0.9
SPTLC3-201ENST00000399002 ABCC2Q92887 1545 aa9.43□□□□□ -0.9
SPTLC3-201ENST00000399002 DKC1O60832 514 aaKnown RBP eCLIP9.42□□□□□ -0.98e-7■■■□□ 17.2
SPTLC3-201ENST00000399002 XRCC6P12956 609 aaKnown RBP eCLIP9.42□□□□□ -0.9
SPTLC3-201ENST00000399002 SNX16P57768 344 aa9.42□□□□□ -0.9
SPTLC3-201ENST00000399002 SV2BQ7L1I2 683 aa9.42□□□□□ -0.9
SPTLC3-201ENST00000399002 FBF1Q8TES7 1133 aa9.42□□□□□ -0.9
SPTLC3-201ENST00000399002 VAMP4O75379 141 aa9.42□□□□□ -0.9
SPTLC3-201ENST00000399002 EPB41P11171 864 aaKnown RBP9.42□□□□□ -0.9
SPTLC3-201ENST00000399002 B4GALNT4Q76KP1 1039 aa9.42□□□□□ -0.9
SPTLC3-201ENST00000399002 CCDC50Q8IVM0 306 aa9.42□□□□□ -0.9
SPTLC3-201ENST00000399002 FAM76AQ8TAV0 307 aa9.42□□□□□ -0.9
SPTLC3-201ENST00000399002 RBM17Q96I25 401 aaKnown RBP9.42□□□□□ -0.9
SPTLC3-201ENST00000399002 SAMD15Q9P1V8 674 aa9.42□□□□□ -0.9
SPTLC3-201ENST00000399002 COPS6Q7L5N1 327 aa9.42□□□□□ -0.9
SPTLC3-201ENST00000399002 CLSTN2Q9H4D0 955 aa9.42□□□□□ -0.9
SPTLC3-201ENST00000399002 MRVI1Q9Y6F6 885 aa9.42□□□□□ -0.9
SPTLC3-201ENST00000399002 PTPRKQ15262 1439 aa9.42□□□□□ -0.9
SPTLC3-201ENST00000399002 CUTAO60888 179 aa9.42□□□□□ -0.9
SPTLC3-201ENST00000399002 SETDB1Q15047 1291 aa9.42□□□□□ -0.9
SPTLC3-201ENST00000399002 CCDC6Q16204 474 aa9.42□□□□□ -0.9
SPTLC3-201ENST00000399002 GPR161Q8N6U8 529 aaKnown RBP9.42□□□□□ -0.9
SPTLC3-201ENST00000399002 LUC7L2Q9Y383 392 aaKnown RBP9.42□□□□□ -0.9
SPTLC3-201ENST00000399002 ARHGEF5Q12774 1597 aa9.42□□□□□ -0.9
SPTLC3-201ENST00000399002 PARP1P09874 1014 aaKnown RBP9.42□□□□□ -0.9
SPTLC3-201ENST00000399002 IL2RBP14784 551 aa9.42□□□□□ -0.9
SPTLC3-201ENST00000399002 LIG1P18858 919 aa9.42□□□□□ -0.9
SPTLC3-201ENST00000399002 GSTA5Q7RTV2 222 aa9.42□□□□□ -0.9
SPTLC3-201ENST00000399002 C8orf58Q8NAV2 365 aa9.42□□□□□ -0.9
SPTLC3-201ENST00000399002 EXOC7Q9UPT5 735 aa9.42□□□□□ -0.9
SPTLC3-201ENST00000399002 TTLL12Q14166 644 aaPredicted RBP9.41□□□□□ -0.9
SPTLC3-201ENST00000399002 ERCC6LQ2NKX8 1250 aa9.41□□□□□ -0.9
SPTLC3-201ENST00000399002 PARP10Q53GL7 1025 aa9.41□□□□□ -0.9
SPTLC3-201ENST00000399002 SNRKQ9NRH2 765 aa9.41□□□□□ -0.9
SPTLC3-201ENST00000399002 ATP7AQ04656 1500 aa9.41□□□□□ -0.9
SPTLC3-201ENST00000399002 EBAG9O00559 213 aa9.41□□□□□ -0.9
SPTLC3-201ENST00000399002 LMBR1LQ6UX01 489 aa9.41□□□□□ -0.9
SPTLC3-201ENST00000399002 DAAM2Q86T65 1068 aa9.41□□□□□ -0.9
SPTLC3-201ENST00000399002 BAG1Q99933 345 aaPredicted RBP9.41□□□□□ -0.9
SPTLC3-201ENST00000399002 TRIM7Q9C029 511 aa9.41□□□□□ -0.9
SPTLC3-201ENST00000399002 PRDM10Q9NQV6 1147 aa9.41□□□□□ -0.9
SPTLC3-201ENST00000399002 FRMD4BQ9Y2L6 1034 aa9.41□□□□□ -0.9
SPTLC3-201ENST00000399002 A0A1W2PP64 1363 aa9.41□□□□□ -0.9
SPTLC3-201ENST00000399002 FOXO3O43524 673 aa9.41□□□□□ -0.9
SPTLC3-201ENST00000399002 ATP6V1AP38606 617 aa9.41□□□□□ -0.9
SPTLC3-201ENST00000399002 HAUS3Q68CZ6 603 aa9.41□□□□□ -0.9
SPTLC3-201ENST00000399002 NUCKS1Q9H1E3 243 aaKnown RBP9.41□□□□□ -0.9
SPTLC3-201ENST00000399002 RNMTO43148 476 aaKnown RBP9.41□□□□□ -0.9
SPTLC3-201ENST00000399002 STX10O60499 249 aa9.41□□□□□ -0.9
SPTLC3-201ENST00000399002 MCTP2Q6DN12 878 aa9.41□□□□□ -0.9
SPTLC3-201ENST00000399002 CCDC110Q8TBZ0 833 aa9.41□□□□□ -0.9
SPTLC3-201ENST00000399002 ZNF608Q9ULD9 1512 aaPredicted RBP9.41□□□□□ -0.9
SPTLC3-201ENST00000399002 MTHFSDQ2M296 383 aaKnown RBP9.41□□□□□ -0.9
SPTLC3-201ENST00000399002 IFT74Q96LB3 600 aa9.41□□□□□ -0.9
SPTLC3-201ENST00000399002 NAPGQ99747 312 aaPredicted RBP9.41□□□□□ -0.9
SPTLC3-201ENST00000399002 PLCB1Q9NQ66 1216 aa9.41□□□□□ -0.9
SPTLC3-201ENST00000399002 POLKQ9UBT6 870 aa9.41□□□□□ -0.9
SPTLC3-201ENST00000399002 GIGYF1O75420 1035 aaPredicted RBP9.4□□□□□ -0.9
SPTLC3-201ENST00000399002 GAS8O95995 478 aa9.4□□□□□ -0.9
SPTLC3-201ENST00000399002 GABPB2Q8TAK5 448 aaPredicted RBP9.4□□□□□ -0.9
SPTLC3-201ENST00000399002 MMRN2Q9H8L6 949 aa9.4□□□□□ -0.9
SPTLC3-201ENST00000399002 KIAA0232Q92628 1395 aa9.4□□□□□ -0.9
SPTLC3-201ENST00000399002 CFAP58Q5T655 872 aa9.4□□□□□ -0.9
SPTLC3-201ENST00000399002 NOL3O60936 208 aaKnown RBP9.4□□□□□ -0.9
SPTLC3-201ENST00000399002 MXRA7P84157 204 aa9.4□□□□□ -0.9
SPTLC3-201ENST00000399002 RBM26Q5T8P6 1007 aaKnown RBP9.4□□□□□ -0.9
SPTLC3-201ENST00000399002 TTC6Q86TZ1 520 aa9.4□□□□□ -0.9
SPTLC3-201ENST00000399002 POTEDQ86YR6 584 aa9.4□□□□□ -0.9
SPTLC3-201ENST00000399002 SMAP1Q8IYB5 467 aaPredicted RBP9.4□□□□□ -0.9
SPTLC3-201ENST00000399002 PLBD2Q8NHP8 589 aa9.4□□□□□ -0.9
SPTLC3-201ENST00000399002 STX8Q9UNK0 236 aa9.4□□□□□ -0.9
SPTLC3-201ENST00000399002 PRIM1P49642 420 aaKnown RBP9.4□□□□□ -0.91
SPTLC3-201ENST00000399002 MNAT1P51948 309 aa9.4□□□□□ -0.91
SPTLC3-201ENST00000399002 GTF2A1P52655 376 aaPredicted RBP9.4□□□□□ -0.91
SPTLC3-201ENST00000399002 NLRP12P59046 1061 aa9.4□□□□□ -0.91
SPTLC3-201ENST00000399002 CALCOCO2Q13137 446 aa9.4□□□□□ -0.91
SPTLC3-201ENST00000399002 TTC31Q49AM3 519 aaPredicted RBP9.4□□□□□ -0.91
SPTLC3-201ENST00000399002 ZNF569Q5MCW4 686 aa9.4□□□□□ -0.91
SPTLC3-201ENST00000399002 DZIP3Q86Y13 1208 aaKnown RBP9.4□□□□□ -0.91
SPTLC3-201ENST00000399002 MAGEB6Q8N7X4 407 aa9.4□□□□□ -0.91
SPTLC3-201ENST00000399002 MLKLQ8NB16 471 aa9.4□□□□□ -0.91
SPTLC3-201ENST00000399002 IP6K1Q92551 441 aa9.4□□□□□ -0.91
SPTLC3-201ENST00000399002 KCNG1Q9UIX4 513 aa9.4□□□□□ -0.91
SPTLC3-201ENST00000399002 CLASP1Q7Z460 1538 aa9.4□□□□□ -0.91
SPTLC3-201ENST00000399002 PZPP20742 1482 aa9.4□□□□□ -0.91
SPTLC3-201ENST00000399002 TNNI2P48788 182 aa9.39□□□□□ -0.91
SPTLC3-201ENST00000399002 PPP2R3AQ06190 1150 aa9.39□□□□□ -0.91
SPTLC3-201ENST00000399002 TFCP2Q12800 502 aa9.39□□□□□ -0.91
SPTLC3-201ENST00000399002 RAB3IL1Q8TBN0 382 aa9.39□□□□□ -0.91
SPTLC3-201ENST00000399002 MAIP1Q8WWC4 291 aa9.39□□□□□ -0.91
SPTLC3-201ENST00000399002 CIB2O75838 187 aa9.39□□□□□ -0.91
SPTLC3-201ENST00000399002 ZNF445P59923 1031 aa9.39□□□□□ -0.91
SPTLC3-201ENST00000399002 SYCE1Q8N0S2 351 aa9.39□□□□□ -0.91
SPTLC3-201ENST00000399002 CCDC51Q96ER9 411 aa9.39□□□□□ -0.91
SPTLC3-201ENST00000399002 LARP6Q9BRS8 491 aaKnown RBP9.39□□□□□ -0.91
SPTLC3-201ENST00000399002 PANK2Q9BZ23 570 aa9.39□□□□□ -0.91
SPTLC3-201ENST00000399002 SYNMO15061 1565 aa9.39□□□□□ -0.91
SPTLC3-201ENST00000399002 LDHBP07195 334 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms