RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 CLNS1AP54105 237 aaKnown RBP10.56□□□□□ -0.72
ATL3-201ENST00000398868 AMPD3Q01432 767 aa10.56□□□□□ -0.72
ATL3-201ENST00000398868 MIPOL1Q8TD10 442 aa10.56□□□□□ -0.72
ATL3-201ENST00000398868 TAOK3Q9H2K8 898 aa10.56□□□□□ -0.72
ATL3-201ENST00000398868 METTL13Q8N6R0 699 aa10.55□□□□□ -0.72
ATL3-201ENST00000398868 NACA2Q9H009 215 aa10.55□□□□□ -0.72
ATL3-201ENST00000398868 PTPN23Q9H3S7 1636 aa10.55□□□□□ -0.72
ATL3-201ENST00000398868 CCNT1O60563 726 aaKnown RBP10.55□□□□□ -0.72
ATL3-201ENST00000398868 ITGA6P23229 1130 aa10.55□□□□□ -0.72
ATL3-201ENST00000398868 ERCC5P28715 1186 aaPredicted RBP10.55□□□□□ -0.72
ATL3-201ENST00000398868 SYT10Q6XYQ8 523 aa10.55□□□□□ -0.72
ATL3-201ENST00000398868 C6orf50Q9HD87 102 aa10.55□□□□□ -0.72
ATL3-201ENST00000398868 CCDC141Q6ZP82 1450 aa10.55□□□□□ -0.72
ATL3-201ENST00000398868 B4E1Z4 1266 aa10.55□□□□□ -0.72
ATL3-201ENST00000398868 SYKP43405 635 aa10.55□□□□□ -0.72
ATL3-201ENST00000398868 PPP1R16BQ96T49 567 aa10.55□□□□□ -0.72
ATL3-201ENST00000398868 LGR6Q9HBX8 967 aa10.55□□□□□ -0.72
ATL3-201ENST00000398868 LZTFL1Q9NQ48 299 aa10.55□□□□□ -0.72
ATL3-201ENST00000398868 RRAGDQ9NQL2 400 aaPredicted RBP10.55□□□□□ -0.72
ATL3-201ENST00000398868 PIK3R4Q99570 1358 aa10.55□□□□□ -0.72
ATL3-201ENST00000398868 ZWINTO95229 277 aa10.55□□□□□ -0.72
ATL3-201ENST00000398868 WDR66Q8TBY9 1149 aa10.55□□□□□ -0.72
ATL3-201ENST00000398868 TBC1D5Q92609 795 aa10.55□□□□□ -0.72
ATL3-201ENST00000398868 TLDC2A0PJX2 215 aa10.55□□□□□ -0.72
ATL3-201ENST00000398868 EBAG9O00559 213 aa10.55□□□□□ -0.72
ATL3-201ENST00000398868 BIRC2Q13490 618 aa10.55□□□□□ -0.72
ATL3-201ENST00000398868 UAP1Q16222 522 aaPredicted RBP10.55□□□□□ -0.72
ATL3-201ENST00000398868 CPLX4Q7Z7G2 160 aa10.55□□□□□ -0.72
ATL3-201ENST00000398868 MAPKAPK5Q8IW41 473 aa10.55□□□□□ -0.72
ATL3-201ENST00000398868 KCNK9Q9NPC2 374 aa10.55□□□□□ -0.72
ATL3-201ENST00000398868 ZNF608Q9ULD9 1512 aaPredicted RBP10.55□□□□□ -0.72
ATL3-201ENST00000398868 PPIP5K2O43314 1243 aa10.55□□□□□ -0.72
ATL3-201ENST00000398868 PDIA4P13667 645 aaKnown RBP10.55□□□□□ -0.72
ATL3-201ENST00000398868 FGFR1OPO95684 399 aaKnown RBP10.54□□□□□ -0.72
ATL3-201ENST00000398868 HMGB1P09429 215 aaKnown RBP10.54□□□□□ -0.72
ATL3-201ENST00000398868 GABPAQ06546 454 aa10.54□□□□□ -0.72
ATL3-201ENST00000398868 TTC30BQ8N4P2 665 aa10.54□□□□□ -0.72
ATL3-201ENST00000398868 CCDC155Q8N6L0 562 aa10.54□□□□□ -0.72
ATL3-201ENST00000398868 AOPEPQ8N6M6 819 aa10.54□□□□□ -0.72
ATL3-201ENST00000398868 CCDC171Q6TFL3 1326 aa10.54□□□□□ -0.72
ATL3-201ENST00000398868 TTC36A6NLP5 189 aa10.54□□□□□ -0.72
ATL3-201ENST00000398868 KRT19P08727 400 aa10.54□□□□□ -0.72
ATL3-201ENST00000398868 CALML3P27482 149 aa10.54□□□□□ -0.72
ATL3-201ENST00000398868 ANKS4BQ8N8V4 417 aa10.54□□□□□ -0.72
ATL3-201ENST00000398868 TGFBRAP1Q8WUH2 860 aa10.54□□□□□ -0.72
ATL3-201ENST00000398868 JAKMIP2Q96AA8 810 aa10.54□□□□□ -0.72
ATL3-201ENST00000398868 RSRC1Q96IZ7 334 aaKnown RBP10.54□□□□□ -0.72
ATL3-201ENST00000398868 HAUS7Q99871 368 aa10.54□□□□□ -0.72
ATL3-201ENST00000398868 DNAJC25Q9H1X3 360 aa10.54□□□□□ -0.72
ATL3-201ENST00000398868 IVNS1ABPQ9Y6Y0 642 aa10.54□□□□□ -0.72
ATL3-201ENST00000398868 HPDP32754 393 aaPredicted RBP10.54□□□□□ -0.72
ATL3-201ENST00000398868 BIRC3Q13489 604 aa10.54□□□□□ -0.72
ATL3-201ENST00000398868 FAM47AQ5JRC9 791 aa10.54□□□□□ -0.72
ATL3-201ENST00000398868 NSMFQ6X4W1 530 aa10.54□□□□□ -0.72
ATL3-201ENST00000398868 PPP1R21Q6ZMI0 780 aa10.54□□□□□ -0.72
ATL3-201ENST00000398868 FRMPD2Q68DX3 1309 aaPredicted RBP10.54□□□□□ -0.72
ATL3-201ENST00000398868 FERP16591 822 aa10.54□□□□□ -0.72
ATL3-201ENST00000398868 SESTD1Q86VW0 696 aa10.54□□□□□ -0.72
ATL3-201ENST00000398868 SPAG5Q96R06 1193 aa10.54□□□□□ -0.72
ATL3-201ENST00000398868 TPD52P55327 224 aaPredicted RBP10.54□□□□□ -0.72
ATL3-201ENST00000398868 IGBP1P78318 339 aa10.54□□□□□ -0.72
ATL3-201ENST00000398868 USP48Q86UV5 1035 aa10.54□□□□□ -0.72
ATL3-201ENST00000398868 SCAND2PQ9GZW5 306 aaPredicted RBP10.54□□□□□ -0.72
ATL3-201ENST00000398868 DENND4BO75064 1496 aaPredicted RBP10.54□□□□□ -0.72
ATL3-201ENST00000398868 UBN2Q6ZU65 1347 aa10.53□□□□□ -0.72
ATL3-201ENST00000398868 CTAGE15A4D2H0 777 aa10.53□□□□□ -0.72
ATL3-201ENST00000398868 VWA3AA6NCI4 1184 aa10.53□□□□□ -0.72
ATL3-201ENST00000398868 UQCRFS1P1P0C7P4 283 aa10.53□□□□□ -0.72
ATL3-201ENST00000398868 CTAGE8P0CG41 777 aa10.53□□□□□ -0.72
ATL3-201ENST00000398868 MCMDC2Q4G0Z9 681 aa10.53□□□□□ -0.72
ATL3-201ENST00000398868 CTAGE6Q86UF2 777 aa10.53□□□□□ -0.72
ATL3-201ENST00000398868 CTAGE4Q8IX94 777 aa10.53□□□□□ -0.72
ATL3-201ENST00000398868 RDH13Q8NBN7 331 aa10.53□□□□□ -0.72
ATL3-201ENST00000398868 IKBKGQ9Y6K9 419 aa10.53□□□□□ -0.72
ATL3-201ENST00000398868 IQGAP2Q13576 1575 aa10.53□□□□□ -0.72
ATL3-201ENST00000398868 PTPROQ16827 1216 aa10.53□□□□□ -0.72
ATL3-201ENST00000398868 ACTN2P35609 894 aa10.53□□□□□ -0.72
ATL3-201ENST00000398868 G2E3Q7L622 706 aa10.53□□□□□ -0.72
ATL3-201ENST00000398868 A0A1B0GUL7 405 aa10.53□□□□□ -0.72
ATL3-201ENST00000398868 BUB1BO60566 1050 aaPredicted RBP10.53□□□□□ -0.72
ATL3-201ENST00000398868 CCT6AP40227 531 aaKnown RBP10.53□□□□□ -0.72
ATL3-201ENST00000398868 KIAA0753Q2KHM9 967 aa10.53□□□□□ -0.72
ATL3-201ENST00000398868 PHACTR3Q96KR7 559 aa10.53□□□□□ -0.72
ATL3-201ENST00000398868 NBPF11Q86T75 865 aa10.53□□□□□ -0.72
ATL3-201ENST00000398868 FAM184BQ9ULE4 1060 aa10.53□□□□□ -0.72
ATL3-201ENST00000398868 GTF2IP78347 998 aa10.53□□□□□ -0.72
ATL3-201ENST00000398868 DNM1Q05193 864 aaKnown RBP10.53□□□□□ -0.72
ATL3-201ENST00000398868 PRPF38AQ8NAV1 312 aaKnown RBP10.53□□□□□ -0.72
ATL3-201ENST00000398868 SEC62Q99442 399 aaKnown RBP10.53□□□□□ -0.72
ATL3-201ENST00000398868 NKTRP30414 1462 aaKnown RBP10.52□□□□□ -0.72
ATL3-201ENST00000398868 TTC21AQ8NDW8 1320 aa10.52□□□□□ -0.72
ATL3-201ENST00000398868 CLRN2A0PK11 232 aa10.52□□□□□ -0.72
ATL3-201ENST00000398868 RFC1P35251 1148 aaPredicted RBP10.52□□□□□ -0.72
ATL3-201ENST00000398868 PCK1P35558 622 aa10.52□□□□□ -0.72
ATL3-201ENST00000398868 ZGPATQ8N5A5 531 aaKnown RBP10.52□□□□□ -0.72
ATL3-201ENST00000398868 TSNARE1Q96NA8 513 aa10.52□□□□□ -0.72
ATL3-201ENST00000398868 CFBP00751 764 aa10.52□□□□□ -0.73
ATL3-201ENST00000398868 AKAP4Q5JQC9 854 aa10.52□□□□□ -0.73
ATL3-201ENST00000398868 NCAPH2Q6IBW4 605 aa10.52□□□□□ -0.73
ATL3-201ENST00000398868 KIAA0825Q8IV33 1275 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms