RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 SARM1Q6SZW1 724 aa11.8□□□□□ -0.52
HMGCLL1-205ENST00000398661 C10orf67Q8IYJ2 551 aa11.8□□□□□ -0.52
HMGCLL1-205ENST00000398661 SECISBP2LQ93073 1101 aaKnown RBP11.8□□□□□ -0.52
HMGCLL1-205ENST00000398661 MRFAP1L1Q96HT8 127 aa11.8□□□□□ -0.52
HMGCLL1-205ENST00000398661 DTNBO60941 627 aa11.79□□□□□ -0.52
HMGCLL1-205ENST00000398661 CASQ1P31415 396 aa11.79□□□□□ -0.52
HMGCLL1-205ENST00000398661 ST5P78524 1137 aa11.79□□□□□ -0.52
HMGCLL1-205ENST00000398661 ARHGAP29Q52LW3 1261 aa11.79□□□□□ -0.52
HMGCLL1-205ENST00000398661 TMCO3Q6UWJ1 677 aa11.79□□□□□ -0.52
HMGCLL1-205ENST00000398661 FILIP1Q7Z7B0 1213 aa11.79□□□□□ -0.52
HMGCLL1-205ENST00000398661 AACSQ86V21 672 aa11.79□□□□□ -0.52
HMGCLL1-205ENST00000398661 LRRN4CLQ8ND94 238 aa11.79□□□□□ -0.52
HMGCLL1-205ENST00000398661 SMARCE1Q969G3 411 aa11.79□□□□□ -0.52
HMGCLL1-205ENST00000398661 STAP2Q9UGK3 403 aa11.79□□□□□ -0.52
HMGCLL1-205ENST00000398661 TRIM66O15016 1216 aa11.79□□□□□ -0.52
HMGCLL1-205ENST00000398661 ITGA6P23229 1130 aa11.79□□□□□ -0.52
HMGCLL1-205ENST00000398661 GTF2A1P52655 376 aaPredicted RBP11.79□□□□□ -0.52
HMGCLL1-205ENST00000398661 TTLL11Q8NHH1 800 aa11.79□□□□□ -0.52
HMGCLL1-205ENST00000398661 NUP98P52948 1817 aa11.78□□□□□ -0.52
HMGCLL1-205ENST00000398661 GOLGA6L19H0YKK7 550 aa11.78□□□□□ -0.52
HMGCLL1-205ENST00000398661 GPS2Q13227 327 aa11.78□□□□□ -0.52
HMGCLL1-205ENST00000398661 G3BP1Q13283 466 aaKnown RBP eCLIP11.78□□□□□ -0.52
HMGCLL1-205ENST00000398661 SNW1Q13573 536 aaKnown RBP11.78□□□□□ -0.52
HMGCLL1-205ENST00000398661 ZSCAN26Q16670 478 aa11.78□□□□□ -0.52
HMGCLL1-205ENST00000398661 CCDC93Q567U6 631 aa11.78□□□□□ -0.52
HMGCLL1-205ENST00000398661 ARGLU1Q9NWB6 273 aaPredicted RBP11.78□□□□□ -0.52
HMGCLL1-205ENST00000398661 LCMT1Q9UIC8 334 aa11.78□□□□□ -0.52
HMGCLL1-205ENST00000398661 NUP188Q5SRE5 1749 aa11.78□□□□□ -0.52
HMGCLL1-205ENST00000398661 TAF1P21675 1872 aa11.78□□□□□ -0.52
HMGCLL1-205ENST00000398661 GOLGA6L4A6NEF3 574 aa11.78□□□□□ -0.52
HMGCLL1-205ENST00000398661 TAF5LO75529 589 aa11.78□□□□□ -0.52
HMGCLL1-205ENST00000398661 CAVIN2O95810 425 aa11.78□□□□□ -0.52
HMGCLL1-205ENST00000398661 RASEFQ8IZ41 740 aa11.78□□□□□ -0.52
HMGCLL1-205ENST00000398661 NEUROD6Q96NK8 337 aa11.78□□□□□ -0.52
HMGCLL1-205ENST00000398661 TMX1Q9H3N1 280 aa11.78□□□□□ -0.52
HMGCLL1-205ENST00000398661 CWC15Q9P013 229 aaKnown RBP11.78□□□□□ -0.52
HMGCLL1-205ENST00000398661 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.78□□□□□ -0.52
HMGCLL1-205ENST00000398661 ERVV-1B6SEH8 477 aa11.77□□□□□ -0.53
HMGCLL1-205ENST00000398661 NTSR2O95665 410 aa11.77□□□□□ -0.53
HMGCLL1-205ENST00000398661 PCCAP05165 728 aaPredicted RBP11.77□□□□□ -0.53
HMGCLL1-205ENST00000398661 MTX1Q13505 466 aa11.77□□□□□ -0.53
HMGCLL1-205ENST00000398661 NFIXQ14938 502 aa11.77□□□□□ -0.53
HMGCLL1-205ENST00000398661 IQCB1Q15051 598 aa11.77□□□□□ -0.53
HMGCLL1-205ENST00000398661 CCDC57Q2TAC2 916 aa11.77□□□□□ -0.53
HMGCLL1-205ENST00000398661 CHMP4CQ96CF2 233 aa11.77□□□□□ -0.53
HMGCLL1-205ENST00000398661 UTP14AQ9BVJ6 771 aaKnown RBP11.77□□□□□ -0.53
HMGCLL1-205ENST00000398661 UBXN6Q9BZV1 441 aa11.77□□□□□ -0.53
HMGCLL1-205ENST00000398661 NHSQ6T4R5 1651 aa11.77□□□□□ -0.53
HMGCLL1-205ENST00000398661 CNTNAP4Q9C0A0 1308 aa11.77□□□□□ -0.53
HMGCLL1-205ENST00000398661 COL4A1P02462 1669 aa11.77□□□□□ -0.53
HMGCLL1-205ENST00000398661 CPA1P15085 419 aa11.77□□□□□ -0.53
HMGCLL1-205ENST00000398661 GYS2P54840 703 aa11.77□□□□□ -0.53
HMGCLL1-205ENST00000398661 RABL6Q3YEC7 729 aaPredicted RBP11.77□□□□□ -0.53
HMGCLL1-205ENST00000398661 ICE2Q659A1 982 aa11.77□□□□□ -0.53
HMGCLL1-205ENST00000398661 ATG9AQ7Z3C6 839 aa11.77□□□□□ -0.53
HMGCLL1-205ENST00000398661 NBPF5PQ86XG9 351 aaPredicted RBP11.77□□□□□ -0.53
HMGCLL1-205ENST00000398661 COL23A1Q86Y22 540 aaPredicted RBP11.77□□□□□ -0.53
HMGCLL1-205ENST00000398661 ZSCAN31Q96LW9 406 aaPredicted RBP11.77□□□□□ -0.53
HMGCLL1-205ENST00000398661 SETDB2Q96T68 719 aa11.77□□□□□ -0.53
HMGCLL1-205ENST00000398661 NARFQ9UHQ1 456 aa11.77□□□□□ -0.53
HMGCLL1-205ENST00000398661 PCNTO95613 3336 aa11.76□□□□□ -0.53
HMGCLL1-205ENST00000398661 ABCC12Q96J65 1359 aa11.76□□□□□ -0.53
HMGCLL1-205ENST00000398661 CTSWP56202 376 aa11.76□□□□□ -0.53
HMGCLL1-205ENST00000398661 FAM173BQ6P4H8 233 aa11.76□□□□□ -0.53
HMGCLL1-205ENST00000398661 LSG1Q9H089 658 aaKnown RBP11.76□□□□□ -0.53
HMGCLL1-205ENST00000398661 ORC3Q9UBD5 711 aaPredicted RBP11.76□□□□□ -0.53
HMGCLL1-205ENST00000398661 SH3TC1Q8TE82 1336 aa11.76□□□□□ -0.53
HMGCLL1-205ENST00000398661 SGSM2O43147 1006 aa11.76□□□□□ -0.53
HMGCLL1-205ENST00000398661 ATP8B1O43520 1251 aa11.76□□□□□ -0.53
HMGCLL1-205ENST00000398661 GYS1P13807 737 aa11.76□□□□□ -0.53
HMGCLL1-205ENST00000398661 CASTP20810 708 aaKnown RBP11.76□□□□□ -0.53
HMGCLL1-205ENST00000398661 OAS2P29728 719 aaKnown RBP11.76□□□□□ -0.53
HMGCLL1-205ENST00000398661 PI16Q6UXB8 463 aa11.76□□□□□ -0.53
HMGCLL1-205ENST00000398661 FERMT3Q86UX7 667 aa11.76□□□□□ -0.53
HMGCLL1-205ENST00000398661 DBNDD2Q9BQY9 259 aa11.76□□□□□ -0.53
HMGCLL1-205ENST00000398661 SCAND2PQ9GZW5 306 aaPredicted RBP11.76□□□□□ -0.53
HMGCLL1-205ENST00000398661 BOLA2Q9H3K6 86 aa11.76□□□□□ -0.53
HMGCLL1-205ENST00000398661 SH2B1Q9NRF2 756 aaPredicted RBP11.76□□□□□ -0.53
HMGCLL1-205ENST00000398661 AOX1Q06278 1338 aa11.75□□□□□ -0.53
HMGCLL1-205ENST00000398661 NR1I2O75469 434 aa11.75□□□□□ -0.53
HMGCLL1-205ENST00000398661 ADORA1P30542 326 aa11.75□□□□□ -0.53
HMGCLL1-205ENST00000398661 MMP14P50281 582 aa11.75□□□□□ -0.53
HMGCLL1-205ENST00000398661 ST3GAL1Q11201 340 aa11.75□□□□□ -0.53
HMGCLL1-205ENST00000398661 TRIM28Q13263 835 aaKnown RBP11.75□□□□□ -0.53
HMGCLL1-205ENST00000398661 IFIT5Q13325 482 aaKnown RBP11.75□□□□□ -0.53
HMGCLL1-205ENST00000398661 LARP1BQ659C4 914 aaKnown RBP11.75□□□□□ -0.53
HMGCLL1-205ENST00000398661 LDHAL6AQ6ZMR3 332 aa11.75□□□□□ -0.53
HMGCLL1-205ENST00000398661 SRLQ86TD4 932 aa11.75□□□□□ -0.53
HMGCLL1-205ENST00000398661 SPATA32Q96LK8 384 aa11.75□□□□□ -0.53
HMGCLL1-205ENST00000398661 USP42Q9H9J4 1324 aaKnown RBP11.75□□□□□ -0.53
HMGCLL1-205ENST00000398661 CDC37L1Q7L3B6 337 aa11.75□□□□□ -0.53
HMGCLL1-205ENST00000398661 FBXO18Q8NFZ0 1043 aa11.75□□□□□ -0.53
HMGCLL1-205ENST00000398661 GOLGA5Q8TBA6 731 aa11.75□□□□□ -0.53
HMGCLL1-205ENST00000398661 UBXN4Q92575 508 aa11.75□□□□□ -0.53
HMGCLL1-205ENST00000398661 ZCCHC17Q9NP64 241 aaKnown RBP11.75□□□□□ -0.53
HMGCLL1-205ENST00000398661 PDRG1Q9NUG6 133 aa11.75□□□□□ -0.53
HMGCLL1-205ENST00000398661 DBNLQ9UJU6 430 aaKnown RBP11.75□□□□□ -0.53
HMGCLL1-205ENST00000398661 VPS53Q5VIR6 699 aa11.74□□□□□ -0.53
HMGCLL1-205ENST00000398661 E4F1Q66K89 784 aaPredicted RBP11.74□□□□□ -0.53
HMGCLL1-205ENST00000398661 C11orf57Q6ZUT1 292 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms