RNA–Protein interactions for RNA: ENST00000398610.2

PCDHGA10-201, Transcript of protocadherin gamma subfamily A, 10, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA10, Length 4,617 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA10-201ENST00000398610 PRC1O43663 620 aa12.11□□□□□ -0.47
PCDHGA10-201ENST00000398610 ZYXQ15942 572 aaKnown RBP12.11□□□□□ -0.47
PCDHGA10-201ENST00000398610 TMEM266Q2M3C6 531 aa12.11□□□□□ -0.47
PCDHGA10-201ENST00000398610 SAP30BPQ9UHR5 308 aaKnown RBP12.11□□□□□ -0.47
PCDHGA10-201ENST00000398610 SH3TC1Q8TE82 1336 aa12.11□□□□□ -0.47
PCDHGA10-201ENST00000398610 ITGA6P23229 1130 aa12.1□□□□□ -0.47
PCDHGA10-201ENST00000398610 KLHL40Q2TBA0 621 aa12.1□□□□□ -0.47
PCDHGA10-201ENST00000398610 PLIN2Q99541 437 aa12.1□□□□□ -0.47
PCDHGA10-201ENST00000398610 PKP1Q13835 747 aa12.1□□□□□ -0.47
PCDHGA10-201ENST00000398610 RAB34Q9BZG1 259 aa12.1□□□□□ -0.47
PCDHGA10-201ENST00000398610 RIMS1Q86UR5 1692 aaKnown RBP12.1□□□□□ -0.47
PCDHGA10-201ENST00000398610 IBTKQ9P2D0 1353 aaPredicted RBP12.1□□□□□ -0.47
PCDHGA10-201ENST00000398610 ZNF165P49910 485 aa12.1□□□□□ -0.47
PCDHGA10-201ENST00000398610 RTN1Q16799 776 aa12.1□□□□□ -0.47
PCDHGA10-201ENST00000398610 UNC5CLQ8IV45 518 aa12.1□□□□□ -0.47
PCDHGA10-201ENST00000398610 CCDC102AQ96A19 550 aa12.1□□□□□ -0.47
PCDHGA10-201ENST00000398610 PEAK1Q9H792 1746 aa12.1□□□□□ -0.47
PCDHGA10-201ENST00000398610 GOLGA6L7A0A1B0GV03 622 aa12.1□□□□□ -0.47
PCDHGA10-201ENST00000398610 DYNC1I1O14576 645 aa12.1□□□□□ -0.47
PCDHGA10-201ENST00000398610 TXLNBQ8N3L3 684 aa12.1□□□□□ -0.47
PCDHGA10-201ENST00000398610 ZBTB9Q96C00 473 aa12.1□□□□□ -0.47
PCDHGA10-201ENST00000398610 CCDC113Q9H0I3 377 aa12.1□□□□□ -0.47
PCDHGA10-201ENST00000398610 GBP3Q9H0R5 595 aa12.1□□□□□ -0.47
PCDHGA10-201ENST00000398610 ANO10Q9NW15 660 aa12.1□□□□□ -0.47
PCDHGA10-201ENST00000398610 CA8P35219 290 aa12.09□□□□□ -0.47
PCDHGA10-201ENST00000398610 CETN2P41208 172 aa12.09□□□□□ -0.47
PCDHGA10-201ENST00000398610 PPP4R3BQ5MIZ7 849 aa12.09□□□□□ -0.47
PCDHGA10-201ENST00000398610 TAF4BQ92750 862 aa12.09□□□□□ -0.47
PCDHGA10-201ENST00000398610 KIF20AO95235 890 aa12.09□□□□□ -0.47
PCDHGA10-201ENST00000398610 MBD4O95243 580 aa12.09□□□□□ -0.47
PCDHGA10-201ENST00000398610 POTEJP0CG39 1038 aa12.09□□□□□ -0.47
PCDHGA10-201ENST00000398610 FAM173BQ6P4H8 233 aa12.09□□□□□ -0.47
PCDHGA10-201ENST00000398610 GTPBP4Q9BZE4 634 aaKnown RBP12.09□□□□□ -0.47
PCDHGA10-201ENST00000398610 USP21Q9UK80 565 aa12.09□□□□□ -0.47
PCDHGA10-201ENST00000398610 CNPY2Q9Y2B0 182 aa12.09□□□□□ -0.47
PCDHGA10-201ENST00000398610 MAGEB6P1A0A0J9YX57 407 aa12.09□□□□□ -0.47
PCDHGA10-201ENST00000398610 GSTTP1A0A1W2PQM5 241 aa12.09□□□□□ -0.47
PCDHGA10-201ENST00000398610 PPP1R12BO60237 982 aaPredicted RBP12.09□□□□□ -0.47
PCDHGA10-201ENST00000398610 UFL1O94874 794 aa12.09□□□□□ -0.47
PCDHGA10-201ENST00000398610 MTIF2P46199 727 aaKnown RBP12.09□□□□□ -0.47
PCDHGA10-201ENST00000398610 DNM1Q05193 864 aaKnown RBP12.09□□□□□ -0.47
PCDHGA10-201ENST00000398610 PPP4R3AQ6IN85 833 aa12.09□□□□□ -0.47
PCDHGA10-201ENST00000398610 IQCEQ6IPM2 695 aa12.09□□□□□ -0.47
PCDHGA10-201ENST00000398610 PAIP2Q9BPZ3 127 aaKnown RBP12.09□□□□□ -0.47
PCDHGA10-201ENST00000398610 OSBPL3Q9H4L5 887 aa12.09□□□□□ -0.47
PCDHGA10-201ENST00000398610 PALD1Q9ULE6 856 aa12.09□□□□□ -0.47
PCDHGA10-201ENST00000398610 GPATCH11Q8N954 259 aa12.09□□□□□ -0.47
PCDHGA10-201ENST00000398610 CALCOCO1Q9P1Z2 691 aa12.09□□□□□ -0.47
PCDHGA10-201ENST00000398610 PCDH11XQ9BZA7 1347 aa12.08□□□□□ -0.48
PCDHGA10-201ENST00000398610 PCDH11YQ9BZA8 1340 aa12.08□□□□□ -0.48
PCDHGA10-201ENST00000398610 ZFYP08048 801 aaPredicted RBP12.08□□□□□ -0.48
PCDHGA10-201ENST00000398610 SSH3Q8TE77 659 aa12.08□□□□□ -0.48
PCDHGA10-201ENST00000398610 NRKQ7Z2Y5 1582 aa12.08□□□□□ -0.48
PCDHGA10-201ENST00000398610 PRAMEF22A3QJZ6 481 aa12.08□□□□□ -0.48
PCDHGA10-201ENST00000398610 ZSCAN12O43309 604 aa12.08□□□□□ -0.48
PCDHGA10-201ENST00000398610 LDHBP07195 334 aaKnown RBP12.08□□□□□ -0.48
PCDHGA10-201ENST00000398610 TOP1P11387 765 aaKnown RBP12.08□□□□□ -0.48
PCDHGA10-201ENST00000398610 GBP2P32456 591 aaPredicted RBP12.08□□□□□ -0.48
PCDHGA10-201ENST00000398610 FNBP4Q8N3X1 1017 aaPredicted RBP12.08□□□□□ -0.48
PCDHGA10-201ENST00000398610 TNNI2P48788 182 aa12.08□□□□□ -0.48
PCDHGA10-201ENST00000398610 PROSER3Q2NL68 480 aa12.08□□□□□ -0.48
PCDHGA10-201ENST00000398610 PKD2L1Q9P0L9 805 aa12.08□□□□□ -0.48
PCDHGA10-201ENST00000398610 SLIT1O75093 1534 aa12.08□□□□□ -0.48
PCDHGA10-201ENST00000398610 APBA3O96018 575 aa12.07□□□□□ -0.48
PCDHGA10-201ENST00000398610 POLD1P28340 1107 aa12.07□□□□□ -0.48
PCDHGA10-201ENST00000398610 NBPF14Q5TI25 921 aa12.07□□□□□ -0.48
PCDHGA10-201ENST00000398610 CTNNBL1Q8WYA6 563 aaPredicted RBP12.07□□□□□ -0.48
PCDHGA10-201ENST00000398610 ARHGAP23Q9P227 1491 aa12.07□□□□□ -0.48
PCDHGA10-201ENST00000398610 BEND3Q5T5X7 828 aa12.07□□□□□ -0.48
PCDHGA10-201ENST00000398610 ZBTB21Q9ULJ3 1066 aa12.07□□□□□ -0.48
PCDHGA10-201ENST00000398610 NEMFO60524 1076 aa12.07□□□□□ -0.48
PCDHGA10-201ENST00000398610 URI1O94763 535 aaPredicted RBP12.07□□□□□ -0.48
PCDHGA10-201ENST00000398610 NAPAP54920 295 aa12.07□□□□□ -0.48
PCDHGA10-201ENST00000398610 CHAMP1Q96JM3 812 aa12.07□□□□□ -0.48
PCDHGA10-201ENST00000398610 PRIMPOLQ96LW4 560 aa12.07□□□□□ -0.48
PCDHGA10-201ENST00000398610 GOLGA6L10A0A0M3HER8 536 aa12.07□□□□□ -0.48
PCDHGA10-201ENST00000398610 HOXB7P09629 217 aa12.07□□□□□ -0.48
PCDHGA10-201ENST00000398610 AK2P54819 239 aa12.07□□□□□ -0.48
PCDHGA10-201ENST00000398610 TCP10Q12799 353 aa12.07□□□□□ -0.48
PCDHGA10-201ENST00000398610 CCDC40Q4G0X9 1142 aa12.07□□□□□ -0.48
PCDHGA10-201ENST00000398610 ZNF804AQ7Z570 1209 aa12.07□□□□□ -0.48
PCDHGA10-201ENST00000398610 SYCP3Q8IZU3 236 aa12.07□□□□□ -0.48
PCDHGA10-201ENST00000398610 VTI1AQ96AJ9 217 aa12.07□□□□□ -0.48
PCDHGA10-201ENST00000398610 SUCLG2Q96I99 432 aa12.07□□□□□ -0.48
PCDHGA10-201ENST00000398610 FAM227BQ96M60 508 aa12.07□□□□□ -0.48
PCDHGA10-201ENST00000398610 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.07□□□□□ -0.48
PCDHGA10-201ENST00000398610 ZSWIM4Q9H7M6 989 aa12.07□□□□□ -0.48
PCDHGA10-201ENST00000398610 HDAC9Q9UKV0 1011 aa12.07□□□□□ -0.48
PCDHGA10-201ENST00000398610 B4E1Z4 1266 aa12.06□□□□□ -0.48
PCDHGA10-201ENST00000398610 EYA2O00167 538 aa12.06□□□□□ -0.48
PCDHGA10-201ENST00000398610 GTF2A1P52655 376 aaPredicted RBP12.06□□□□□ -0.48
PCDHGA10-201ENST00000398610 ARHGEF25Q86VW2 580 aa12.06□□□□□ -0.48
PCDHGA10-201ENST00000398610 CALML4Q96GE6 196 aa12.06□□□□□ -0.48
PCDHGA10-201ENST00000398610 DRC1Q96MC2 740 aa12.06□□□□□ -0.48
PCDHGA10-201ENST00000398610 NUP88Q99567 741 aaPredicted RBP12.06□□□□□ -0.48
PCDHGA10-201ENST00000398610 HMG20BQ9P0W2 317 aa12.06□□□□□ -0.48
PCDHGA10-201ENST00000398610 CLIP2Q9UDT6 1046 aa12.06□□□□□ -0.48
PCDHGA10-201ENST00000398610 CCDC178Q5BJE1 867 aa12.06□□□□□ -0.48
PCDHGA10-201ENST00000398610 AKNAD1Q5T1N1 836 aa12.06□□□□□ -0.48
PCDHGA10-201ENST00000398610 CCDC102BQ68D86 513 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms