RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 ZNF287Q9HBT7 754 aa12.87□□□□□ -0.35
IFT140-202ENST00000397417 PTPRUQ92729 1446 aa12.87□□□□□ -0.35
IFT140-202ENST00000397417 UBA7P41226 1012 aa12.87□□□□□ -0.35
IFT140-202ENST00000397417 ADAMTS13Q76LX8 1427 aa12.87□□□□□ -0.35
IFT140-202ENST00000397417 SEPT12Q8IYM1 358 aa12.87□□□□□ -0.35
IFT140-202ENST00000397417 PDE6AP16499 860 aa12.87□□□□□ -0.35
IFT140-202ENST00000397417 FILIP1LQ4L180 1135 aa12.87□□□□□ -0.35
IFT140-202ENST00000397417 LUZP1Q86V48 1076 aa12.87□□□□□ -0.35
IFT140-202ENST00000397417 LARGE1O95461 756 aa12.86□□□□□ -0.35
IFT140-202ENST00000397417 TNNI2P48788 182 aa12.86□□□□□ -0.35
IFT140-202ENST00000397417 ZNF174Q15697 407 aa12.86□□□□□ -0.35
IFT140-202ENST00000397417 PTPRMP28827 1452 aa12.86□□□□□ -0.35
IFT140-202ENST00000397417 CDK12Q9NYV4 1490 aaPredicted RBP12.86□□□□□ -0.35
IFT140-202ENST00000397417 A0A0U1RQG5 324 aaPredicted RBP12.86□□□□□ -0.35
IFT140-202ENST00000397417 PDE8BO95263 885 aa12.86□□□□□ -0.35
IFT140-202ENST00000397417 HLA-DOAP06340 250 aa12.86□□□□□ -0.35
IFT140-202ENST00000397417 CYP21A2P08686 494 aa12.86□□□□□ -0.35
IFT140-202ENST00000397417 GOLGA8HP0CJ92 632 aa12.86□□□□□ -0.35
IFT140-202ENST00000397417 SYKP43405 635 aa12.86□□□□□ -0.35
IFT140-202ENST00000397417 DYNLL1P63167 89 aaKnown RBP12.86□□□□□ -0.35
IFT140-202ENST00000397417 MFSD14BQ5SR56 506 aa12.86□□□□□ -0.35
IFT140-202ENST00000397417 KRT23Q9C075 422 aa12.86□□□□□ -0.35
IFT140-202ENST00000397417 DPP8Q6V1X1 898 aaPredicted RBP12.86□□□□□ -0.35
IFT140-202ENST00000397417 FTOQ9C0B1 505 aaKnown RBP eCLIP12.86□□□□□ -0.35
IFT140-202ENST00000397417 SEPT11Q9NVA2 429 aaKnown RBP12.86□□□□□ -0.35
IFT140-202ENST00000397417 NAPAP54920 295 aa12.85□□□□□ -0.35
IFT140-202ENST00000397417 DIXDC1Q155Q3 683 aa12.85□□□□□ -0.35
IFT140-202ENST00000397417 GAS2L3Q86XJ1 694 aa12.85□□□□□ -0.35
IFT140-202ENST00000397417 PUS7LQ9H0K6 701 aaKnown RBP12.85□□□□□ -0.35
IFT140-202ENST00000397417 MMRN2Q9H8L6 949 aa12.85□□□□□ -0.35
IFT140-202ENST00000397417 GGA1Q9UJY5 639 aa12.85□□□□□ -0.35
IFT140-202ENST00000397417 SAMM50Q9Y512 469 aa12.85□□□□□ -0.35
IFT140-202ENST00000397417 ARHGEF40Q8TER5 1519 aa12.85□□□□□ -0.35
IFT140-202ENST00000397417 PPFIBP1Q86W92 1011 aa12.85□□□□□ -0.35
IFT140-202ENST00000397417 EEF2KMTQ96G04 330 aa12.85□□□□□ -0.35
IFT140-202ENST00000397417 CLIP2Q9UDT6 1046 aa12.85□□□□□ -0.35
IFT140-202ENST00000397417 HEG1Q9ULI3 1381 aa12.85□□□□□ -0.35
IFT140-202ENST00000397417 SHPRHQ149N8 1683 aa12.85□□□□□ -0.35
IFT140-202ENST00000397417 PCCAP05165 728 aaPredicted RBP12.85□□□□□ -0.35
IFT140-202ENST00000397417 EIF5P55010 431 aaKnown RBP12.85□□□□□ -0.35
IFT140-202ENST00000397417 COPRSQ9NQ92 184 aa12.85□□□□□ -0.35
IFT140-202ENST00000397417 PNPLA6Q8IY17 1366 aa12.85□□□□□ -0.35
IFT140-202ENST00000397417 LRRC7Q96NW7 1537 aa12.85□□□□□ -0.35
IFT140-202ENST00000397417 MYO3AQ8NEV4 1616 aa12.85□□□□□ -0.35
IFT140-202ENST00000397417 OSBP2Q969R2 916 aa12.85□□□□□ -0.35
IFT140-202ENST00000397417 NOM1Q5C9Z4 860 aaKnown RBP12.84□□□□□ -0.35
IFT140-202ENST00000397417 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.84□□□□□ -0.35
IFT140-202ENST00000397417 VPS54Q9P1Q0 977 aa12.84□□□□□ -0.35
IFT140-202ENST00000397417 SPTLC2O15270 562 aa12.84□□□□□ -0.35
IFT140-202ENST00000397417 CT47A1Q5JQC4 288 aaPredicted RBP12.84□□□□□ -0.35
IFT140-202ENST00000397417 TMC6Q7Z403 805 aa12.84□□□□□ -0.35
IFT140-202ENST00000397417 RICTORQ6R327 1708 aa12.84□□□□□ -0.35
IFT140-202ENST00000397417 KIF5BP33176 963 aa12.84□□□□□ -0.35
IFT140-202ENST00000397417 FCHSD1Q86WN1 690 aa12.84□□□□□ -0.35
IFT140-202ENST00000397417 C17orf53Q8N3J3 647 aaPredicted RBP12.84□□□□□ -0.35
IFT140-202ENST00000397417 AOPEPQ8N6M6 819 aa12.84□□□□□ -0.35
IFT140-202ENST00000397417 CDCA7Q9BWT1 371 aaPredicted RBP12.84□□□□□ -0.35
IFT140-202ENST00000397417 DBNDD1Q9H9R9 158 aa12.84□□□□□ -0.35
IFT140-202ENST00000397417 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.84□□□□□ -0.355e-8■■■■■ 35.8
IFT140-202ENST00000397417 PPLO60437 1756 aa12.84□□□□□ -0.35
IFT140-202ENST00000397417 VWA3AA6NCI4 1184 aa12.83□□□□□ -0.36
IFT140-202ENST00000397417 ZSCAN30Q86W11 494 aa12.83□□□□□ -0.36
IFT140-202ENST00000397417 TTLL11Q8NHH1 800 aa12.83□□□□□ -0.36
IFT140-202ENST00000397417 DEF6Q9H4E7 631 aa12.83□□□□□ -0.36
IFT140-202ENST00000397417 ANO10Q9NW15 660 aa12.83□□□□□ -0.36
IFT140-202ENST00000397417 ZBTB21Q9ULJ3 1066 aa12.83□□□□□ -0.36
IFT140-202ENST00000397417 ANGEL1Q9UNK9 670 aaKnown RBP12.83□□□□□ -0.36
IFT140-202ENST00000397417 TFAP4Q01664 338 aa12.83□□□□□ -0.36
IFT140-202ENST00000397417 ZSWIM4Q9H7M6 989 aa12.83□□□□□ -0.36
IFT140-202ENST00000397417 NEXMIFQ5QGS0 1516 aa12.83□□□□□ -0.36
IFT140-202ENST00000397417 PLS1Q14651 629 aa12.83□□□□□ -0.36
IFT140-202ENST00000397417 AIFM3Q96NN9 605 aa12.83□□□□□ -0.36
IFT140-202ENST00000397417 ZNF408Q9H9D4 720 aa12.83□□□□□ -0.36
IFT140-202ENST00000397417 HELLSQ9NRZ9 838 aa12.83□□□□□ -0.36
IFT140-202ENST00000397417 RAD51AP2Q09MP3 1159 aa12.82□□□□□ -0.36
IFT140-202ENST00000397417 SCARF1Q14162 830 aa12.82□□□□□ -0.36
IFT140-202ENST00000397417 LETM2Q2VYF4 491 aa12.82□□□□□ -0.36
IFT140-202ENST00000397417 SLF2Q8IX21 1173 aa12.82□□□□□ -0.36
IFT140-202ENST00000397417 LARGE2Q8N3Y3 721 aa12.82□□□□□ -0.36
IFT140-202ENST00000397417 RBSNQ9H1K0 784 aa12.82□□□□□ -0.36
IFT140-202ENST00000397417 DENND2AQ9ULE3 1009 aa12.82□□□□□ -0.36
IFT140-202ENST00000397417 TTF2Q9UNY4 1162 aaKnown RBP12.82□□□□□ -0.36
IFT140-202ENST00000397417 CCDC178Q5BJE1 867 aa12.82□□□□□ -0.36
IFT140-202ENST00000397417 TCERG1LQ5VWI1 586 aa12.82□□□□□ -0.36
IFT140-202ENST00000397417 LSG1Q9H089 658 aaKnown RBP12.82□□□□□ -0.36
IFT140-202ENST00000397417 BMP2KQ9NSY1 1161 aaPredicted RBP12.82□□□□□ -0.36
IFT140-202ENST00000397417 TMEM63CQ9P1W3 806 aa12.82□□□□□ -0.36
IFT140-202ENST00000397417 ATF5Q9Y2D1 282 aaPredicted RBP12.82□□□□□ -0.36
IFT140-202ENST00000397417 M0R2C6 588 aa12.82□□□□□ -0.36
IFT140-202ENST00000397417 CACNB3P54284 484 aa12.82□□□□□ -0.36
IFT140-202ENST00000397417 STIM1Q13586 685 aa12.82□□□□□ -0.36
IFT140-202ENST00000397417 JAKMIP3Q5VZ66 844 aa12.82□□□□□ -0.36
IFT140-202ENST00000397417 CAGE1Q8TC20 777 aa12.82□□□□□ -0.36
IFT140-202ENST00000397417 PI4K2BQ8TCG2 481 aa12.82□□□□□ -0.36
IFT140-202ENST00000397417 KIF2CQ99661 725 aa12.82□□□□□ -0.36
IFT140-202ENST00000397417 HAUS7Q99871 368 aa12.82□□□□□ -0.36
IFT140-202ENST00000397417 BCS1LQ9Y276 419 aa12.82□□□□□ -0.36
IFT140-202ENST00000397417 CAMSAP1Q5T5Y3 1602 aa12.81□□□□□ -0.36
IFT140-202ENST00000397417 CPSF1Q10570 1443 aaKnown RBP12.81□□□□□ -0.36
IFT140-202ENST00000397417 IL6STP40189 918 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms