RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 PTPN23Q9H3S7 1636 aa8.47□□□□□ -1.05
AP3S1-202ENST00000395548 SPDYE3A6NKU9 549 aa8.47□□□□□ -1.05
AP3S1-202ENST00000395548 ATG7O95352 703 aa8.47□□□□□ -1.05
AP3S1-202ENST00000395548 SRPK2P78362 688 aaKnown RBP8.47□□□□□ -1.05
AP3S1-202ENST00000395548 NPM2Q86SE8 214 aaKnown RBP8.47□□□□□ -1.05
AP3S1-202ENST00000395548 GSX2Q9BZM3 304 aa8.47□□□□□ -1.05
AP3S1-202ENST00000395548 USP32Q8NFA0 1604 aa8.47□□□□□ -1.05
AP3S1-202ENST00000395548 EEA1Q15075 1411 aa8.46□□□□□ -1.05
AP3S1-202ENST00000395548 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.46□□□□□ -1.06
AP3S1-202ENST00000395548 IDH3AP50213 366 aa8.46□□□□□ -1.06
AP3S1-202ENST00000395548 CCINQ13939 588 aa8.46□□□□□ -1.06
AP3S1-202ENST00000395548 PRIMPOLQ96LW4 560 aa8.46□□□□□ -1.06
AP3S1-202ENST00000395548 SPOCK3Q9BQ16 436 aa8.46□□□□□ -1.06
AP3S1-202ENST00000395548 PLVAPQ9BX97 442 aa8.46□□□□□ -1.06
AP3S1-202ENST00000395548 C11orf16Q9NQ32 467 aa8.46□□□□□ -1.06
AP3S1-202ENST00000395548 PRDM6Q9NQX0 595 aa8.46□□□□□ -1.06
AP3S1-202ENST00000395548 ZMIZ1Q9ULJ6 1067 aa8.46□□□□□ -1.06
AP3S1-202ENST00000395548 PXDNQ92626 1479 aa8.45□□□□□ -1.06
AP3S1-202ENST00000395548 M0R082 166 aa8.45□□□□□ -1.06
AP3S1-202ENST00000395548 MICAL2O94851 1124 aa8.45□□□□□ -1.06
AP3S1-202ENST00000395548 ITGB2P05107 769 aa8.45□□□□□ -1.06
AP3S1-202ENST00000395548 INPP5BP32019 993 aa8.45□□□□□ -1.06
AP3S1-202ENST00000395548 ARSDP51689 593 aa8.45□□□□□ -1.06
AP3S1-202ENST00000395548 ZNF417Q8TAU3 575 aa8.45□□□□□ -1.06
AP3S1-202ENST00000395548 ZNF526Q8TF50 670 aaPredicted RBP8.45□□□□□ -1.06
AP3S1-202ENST00000395548 ZNF587Q96SQ5 575 aaPredicted RBP8.45□□□□□ -1.06
AP3S1-202ENST00000395548 UBE2OQ9C0C9 1292 aaKnown RBP8.45□□□□□ -1.06
AP3S1-202ENST00000395548 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.45□□□□□ -1.06
AP3S1-202ENST00000395548 CASZ1Q86V15 1759 aa8.45□□□□□ -1.06
AP3S1-202ENST00000395548 PRMT3O60678 531 aa8.44□□□□□ -1.06
AP3S1-202ENST00000395548 PDE3BQ13370 1112 aa8.44□□□□□ -1.06
AP3S1-202ENST00000395548 FKBP5Q13451 457 aaPredicted RBP8.44□□□□□ -1.06
AP3S1-202ENST00000395548 MICALL1Q8N3F8 863 aa8.44□□□□□ -1.06
AP3S1-202ENST00000395548 PBXIP1Q96AQ6 731 aa8.44□□□□□ -1.06
AP3S1-202ENST00000395548 TRIM11Q96F44 468 aa8.44□□□□□ -1.06
AP3S1-202ENST00000395548 IFT43Q96FT9 208 aa8.44□□□□□ -1.06
AP3S1-202ENST00000395548 IGFLR1Q9H665 355 aa8.44□□□□□ -1.06
AP3S1-202ENST00000395548 SPATA31A3Q5VYP0 1347 aa8.44□□□□□ -1.06
AP3S1-202ENST00000395548 XRN1Q8IZH2 1706 aaKnown RBP8.43□□□□□ -1.06
AP3S1-202ENST00000395548 PLSCR1O15162 318 aa8.43□□□□□ -1.06
AP3S1-202ENST00000395548 TOMM70O94826 608 aa8.43□□□□□ -1.06
AP3S1-202ENST00000395548 XPCQ01831 940 aaPredicted RBP8.43□□□□□ -1.06
AP3S1-202ENST00000395548 MLLT1Q03111 559 aaPredicted RBP8.43□□□□□ -1.06
AP3S1-202ENST00000395548 TBC1D8BQ0IIM8 1120 aa8.43□□□□□ -1.06
AP3S1-202ENST00000395548 PCSK7Q16549 785 aa8.43□□□□□ -1.06
AP3S1-202ENST00000395548 STK32AQ8WU08 396 aa8.43□□□□□ -1.06
AP3S1-202ENST00000395548 PDGFDQ9GZP0 370 aaPredicted RBP8.43□□□□□ -1.06
AP3S1-202ENST00000395548 STARD13Q9Y3M8 1113 aa8.43□□□□□ -1.06
AP3S1-202ENST00000395548 SPATA31A5Q5VU36 1347 aa8.43□□□□□ -1.06
AP3S1-202ENST00000395548 SPATA31A7Q8IWB4 1347 aa8.43□□□□□ -1.06
AP3S1-202ENST00000395548 TNS2Q63HR2 1409 aa8.43□□□□□ -1.06
AP3S1-202ENST00000395548 ARHGEF5Q12774 1597 aa8.43□□□□□ -1.06
AP3S1-202ENST00000395548 ALBP02768 609 aa8.42□□□□□ -1.06
AP3S1-202ENST00000395548 SPATA31C1P0DKV0 1188 aa8.42□□□□□ -1.06
AP3S1-202ENST00000395548 NFKB1P19838 968 aa8.42□□□□□ -1.06
AP3S1-202ENST00000395548 OCLNQ16625 522 aa8.42□□□□□ -1.06
AP3S1-202ENST00000395548 PRRT3Q5FWE3 981 aa8.42□□□□□ -1.06
AP3S1-202ENST00000395548 COL26A1Q96A83 441 aa8.42□□□□□ -1.06
AP3S1-202ENST00000395548 BTG4Q9NY30 223 aa8.42□□□□□ -1.06
AP3S1-202ENST00000395548 STK32BQ9NY57 414 aa8.42□□□□□ -1.06
AP3S1-202ENST00000395548 LRFN2Q9ULH4 789 aa8.42□□□□□ -1.06
AP3S1-202ENST00000395548 DUOX2Q9NRD8 1548 aa8.42□□□□□ -1.06
AP3S1-202ENST00000395548 NALCNQ8IZF0 1738 aa8.41□□□□□ -1.06
AP3S1-202ENST00000395548 PLCH1Q4KWH8 1693 aa8.41□□□□□ -1.06
AP3S1-202ENST00000395548 LMTK2Q8IWU2 1503 aa8.41□□□□□ -1.06
AP3S1-202ENST00000395548 LILRB5O75023 590 aa8.41□□□□□ -1.06
AP3S1-202ENST00000395548 PROCP04070 461 aa8.41□□□□□ -1.06
AP3S1-202ENST00000395548 HSPA1AP0DMV8 641 aaKnown RBP8.41□□□□□ -1.06
AP3S1-202ENST00000395548 HSPA1BP0DMV9 641 aaKnown RBP8.41□□□□□ -1.06
AP3S1-202ENST00000395548 TRIM26Q12899 539 aaPredicted RBP8.41□□□□□ -1.06
AP3S1-202ENST00000395548 SUZ12Q15022 739 aaKnown RBP8.41□□□□□ -1.06
AP3S1-202ENST00000395548 COX20Q5RI15 118 aa8.41□□□□□ -1.06
AP3S1-202ENST00000395548 C20orf204Q6ZNR8 217 aa8.41□□□□□ -1.06
AP3S1-202ENST00000395548 SLC6A14Q9UN76 642 aa8.41□□□□□ -1.06
AP3S1-202ENST00000395548 CROCC2H7BZ55 1655 aa8.4□□□□□ -1.06
AP3S1-202ENST00000395548 C1QTNF9BB2RNN3 333 aa8.4□□□□□ -1.06
AP3S1-202ENST00000395548 PTCD1O75127 700 aaKnown RBP8.4□□□□□ -1.06
AP3S1-202ENST00000395548 MAP3K6O95382 1288 aa8.4□□□□□ -1.06
AP3S1-202ENST00000395548 TMEM164Q5U3C3 297 aa8.4□□□□□ -1.06
AP3S1-202ENST00000395548 C16orf46Q6P387 395 aa8.4□□□□□ -1.06
AP3S1-202ENST00000395548 DNAJB12Q9NXW2 375 aaKnown RBP8.4□□□□□ -1.06
AP3S1-202ENST00000395548 THSD7AQ9UPZ6 1657 aa8.4□□□□□ -1.07
AP3S1-202ENST00000395548 ERBINQ96RT1 1412 aa8.39□□□□□ -1.07
AP3S1-202ENST00000395548 ADCY9O60503 1353 aa8.39□□□□□ -1.07
AP3S1-202ENST00000395548 BRD2P25440 801 aaKnown RBP8.39□□□□□ -1.07
AP3S1-202ENST00000395548 ARID4AP29374 1257 aaPredicted RBP8.39□□□□□ -1.07
AP3S1-202ENST00000395548 TRIM28Q13263 835 aaKnown RBP8.39□□□□□ -1.07
AP3S1-202ENST00000395548 TREML1Q86YW5 311 aa8.39□□□□□ -1.07
AP3S1-202ENST00000395548 CLP1Q92989 425 aaKnown RBP8.39□□□□□ -1.07
AP3S1-202ENST00000395548 CXXC1Q9P0U4 656 aaPredicted RBP8.39□□□□□ -1.07
AP3S1-202ENST00000395548 RTCBQ9Y3I0 505 aaKnown RBP8.39□□□□□ -1.07
AP3S1-202ENST00000395548 CCDC144AA2RUR9 1427 aa8.38□□□□□ -1.07
AP3S1-202ENST00000395548 OPLAHO14841 1288 aa8.38□□□□□ -1.07
AP3S1-202ENST00000395548 GRNP28799 593 aaKnown RBP8.38□□□□□ -1.07
AP3S1-202ENST00000395548 SLC15A2Q16348 729 aa8.38□□□□□ -1.07
AP3S1-202ENST00000395548 C8orf86Q6ZUL3 223 aa8.38□□□□□ -1.07
AP3S1-202ENST00000395548 CD163Q86VB7 1156 aa8.38□□□□□ -1.07
AP3S1-202ENST00000395548 RRBP1Q9P2E9 1410 aaKnown RBP8.37□□□□□ -1.07
AP3S1-202ENST00000395548 USP19O94966 1318 aa8.37□□□□□ -1.07
AP3S1-202ENST00000395548 SASH3O75995 380 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms