RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 RNF113AO15541 343 aaKnown RBP23.07■■□□□ 1.28
LMNB1-202ENST00000395354 ZKSCAN1P17029 563 aaPredicted RBP23.07■■□□□ 1.28
LMNB1-202ENST00000395354 ZMYM1Q5SVZ6 1142 aa23.07■■□□□ 1.28
LMNB1-202ENST00000395354 SPRYD3Q8NCJ5 442 aa23.07■■□□□ 1.28
LMNB1-202ENST00000395354 RNF181Q9P0P0 153 aa23.07■■□□□ 1.28
LMNB1-202ENST00000395354 RBM8AQ9Y5S9 174 aaKnown RBP23.07■■□□□ 1.28
LMNB1-202ENST00000395354 YDJCA8MPS7 323 aa23.06■■□□□ 1.28
LMNB1-202ENST00000395354 RNF20Q5VTR2 975 aa23.06■■□□□ 1.28
LMNB1-202ENST00000395354 C9orf131Q5VYM1 1079 aa23.06■■□□□ 1.28
LMNB1-202ENST00000395354 PI16Q6UXB8 463 aa23.06■■□□□ 1.28
LMNB1-202ENST00000395354 GTF2IP78347 998 aa23.06■■□□□ 1.28
LMNB1-202ENST00000395354 CHAF1AQ13111 956 aaPredicted RBP23.06■■□□□ 1.28
LMNB1-202ENST00000395354 TTF1Q15361 905 aaPredicted RBP23.06■■□□□ 1.28
LMNB1-202ENST00000395354 TTLL5Q6EMB2 1281 aa23.06■■□□□ 1.28
LMNB1-202ENST00000395354 ZNF589Q86UQ0 364 aaPredicted RBP23.06■■□□□ 1.28
LMNB1-202ENST00000395354 JAG2Q9Y219 1238 aa23.06■■□□□ 1.28
LMNB1-202ENST00000395354 CREB3L3Q68CJ9 461 aa23.05■■□□□ 1.28
LMNB1-202ENST00000395354 RASEFQ8IZ41 740 aa23.05■■□□□ 1.28
LMNB1-202ENST00000395354 FZD9O00144 591 aa23.04■■□□□ 1.28
LMNB1-202ENST00000395354 ZAP70P43403 619 aa23.04■■□□□ 1.28
LMNB1-202ENST00000395354 NBR1Q14596 966 aa23.04■■□□□ 1.28
LMNB1-202ENST00000395354 NFKBIBQ15653 356 aa23.04■■□□□ 1.28
LMNB1-202ENST00000395354 TSGA10IPQ3SY00 556 aa23.04■■□□□ 1.28
LMNB1-202ENST00000395354 FBXW7Q969H0 707 aa23.04■■□□□ 1.28
LMNB1-202ENST00000395354 U3KPZ7 1027 aaPredicted RBP23.04■■□□□ 1.28
LMNB1-202ENST00000395354 PDS5AQ29RF7 1337 aaKnown RBP23.03■■□□□ 1.28
LMNB1-202ENST00000395354 FAM205AQ6ZU69 1335 aa23.03■■□□□ 1.28
LMNB1-202ENST00000395354 AKAP11Q9UKA4 1901 aa23.03■■□□□ 1.28
LMNB1-202ENST00000395354 DICER1Q9UPY3 1922 aaKnown RBP23.03■■□□□ 1.28
LMNB1-202ENST00000395354 USP17L3A6NCW0 530 aa23.03■■□□□ 1.28
LMNB1-202ENST00000395354 USP17L4A6NCW7 530 aa23.03■■□□□ 1.28
LMNB1-202ENST00000395354 RAD17O75943 681 aa23.03■■□□□ 1.28
LMNB1-202ENST00000395354 STRIP1Q5VSL9 837 aa23.03■■□□□ 1.28
LMNB1-202ENST00000395354 USP17L1Q7RTZ2 530 aa23.03■■□□□ 1.28
LMNB1-202ENST00000395354 WDR66Q8TBY9 1149 aa23.03■■□□□ 1.28
LMNB1-202ENST00000395354 EIF6P56537 245 aaKnown RBP23.02■■□□□ 1.28
LMNB1-202ENST00000395354 CXCL9Q07325 125 aa23.02■■□□□ 1.28
LMNB1-202ENST00000395354 ZSCAN25Q6NSZ9 544 aa23.02■■□□□ 1.28
LMNB1-202ENST00000395354 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.02■■□□□ 1.288e-7■■■□□ 17.2
LMNB1-202ENST00000395354 CWC22Q9HCG8 908 aaKnown RBP23.02■■□□□ 1.28
LMNB1-202ENST00000395354 SCN9AQ15858 1988 aa23.02■■□□□ 1.28
LMNB1-202ENST00000395354 COL1A1P02452 1464 aaPredicted RBP23.02■■□□□ 1.27
LMNB1-202ENST00000395354 SLC27A2O14975 620 aa23.01■■□□□ 1.27
LMNB1-202ENST00000395354 CYP2E1P05181 493 aaPredicted RBP23.01■■□□□ 1.27
LMNB1-202ENST00000395354 PSMA5P28066 241 aa23.01■■□□□ 1.27
LMNB1-202ENST00000395354 DSCC1Q9BVC3 393 aa23.01■■□□□ 1.27
LMNB1-202ENST00000395354 MYH13Q9UKX3 1938 aa23.01■■□□□ 1.27
LMNB1-202ENST00000395354 TTC14Q96N46 770 aa23.01■■□□□ 1.27
LMNB1-202ENST00000395354 UPF3BQ9BZI7 483 aaKnown RBP23.01■■□□□ 1.27
LMNB1-202ENST00000395354 ZSWIM6Q9HCJ5 1215 aa23.01■■□□□ 1.27
LMNB1-202ENST00000395354 TNIP1Q15025 636 aa23■■□□□ 1.27
LMNB1-202ENST00000395354 MFSD14BQ5SR56 506 aa23■■□□□ 1.27
LMNB1-202ENST00000395354 DACT2Q5SW24 774 aa23■■□□□ 1.27
LMNB1-202ENST00000395354 CIAPIN1Q6FI81 312 aa23■■□□□ 1.27
LMNB1-202ENST00000395354 TBC1D22AQ8WUA7 517 aa23■■□□□ 1.27
LMNB1-202ENST00000395354 TMX3Q96JJ7 454 aa23■■□□□ 1.27
LMNB1-202ENST00000395354 PSMD14O00487 310 aa22.99■■□□□ 1.27
LMNB1-202ENST00000395354 CUL4AQ13619 759 aa22.99■■□□□ 1.27
LMNB1-202ENST00000395354 KRT32Q14532 448 aa22.99■■□□□ 1.27
LMNB1-202ENST00000395354 SEC62Q99442 399 aaKnown RBP22.99■■□□□ 1.27
LMNB1-202ENST00000395354 MXD3Q9BW11 206 aa22.99■■□□□ 1.27
LMNB1-202ENST00000395354 ABCF2Q9UG63 623 aa22.99■■□□□ 1.27
LMNB1-202ENST00000395354 RPAP1Q9BWH6 1393 aaPredicted RBP22.98■■□□□ 1.27
LMNB1-202ENST00000395354 VIL1P09327 827 aaKnown RBP22.98■■□□□ 1.27
LMNB1-202ENST00000395354 VPS53Q5VIR6 699 aa22.98■■□□□ 1.27
LMNB1-202ENST00000395354 APPBP2Q92624 585 aa22.98■■□□□ 1.27
LMNB1-202ENST00000395354 CYP46A1Q9Y6A2 500 aa22.98■■□□□ 1.27
LMNB1-202ENST00000395354 MAST3O60307 1309 aa22.98■■□□□ 1.27
LMNB1-202ENST00000395354 SALL1Q9NSC2 1324 aa22.98■■□□□ 1.27
LMNB1-202ENST00000395354 CASTP20810 708 aaKnown RBP22.97■■□□□ 1.27
LMNB1-202ENST00000395354 CCDC129Q6ZRS4 1044 aa22.97■■□□□ 1.27
LMNB1-202ENST00000395354 ZGPATQ8N5A5 531 aaKnown RBP22.97■■□□□ 1.27
LMNB1-202ENST00000395354 CERS5Q8N5B7 392 aa22.97■■□□□ 1.27
LMNB1-202ENST00000395354 INTS4Q96HW7 963 aaKnown RBP22.97■■□□□ 1.27
LMNB1-202ENST00000395354 JAKMIP1Q96N16 626 aaKnown RBP22.97■■□□□ 1.27
LMNB1-202ENST00000395354 PIH1D3Q9NQM4 214 aaKnown RBP22.97■■□□□ 1.27
LMNB1-202ENST00000395354 CHGBP05060 677 aa22.97■■□□□ 1.27
LMNB1-202ENST00000395354 FKBP1AP62942 108 aaKnown RBP22.97■■□□□ 1.27
LMNB1-202ENST00000395354 RSBN1LQ6PCB5 846 aaPredicted RBP22.97■■□□□ 1.27
LMNB1-202ENST00000395354 RUFY3Q7L099 469 aa22.97■■□□□ 1.27
LMNB1-202ENST00000395354 LRP2BPQ9P2M1 347 aa22.97■■□□□ 1.27
LMNB1-202ENST00000395354 ZNF541Q9H0D2 1346 aa22.96■■□□□ 1.27
LMNB1-202ENST00000395354 SPTY2D1Q68D10 685 aaPredicted RBP22.96■■□□□ 1.27
LMNB1-202ENST00000395354 ALDH8A1Q9H2A2 487 aaPredicted RBP22.96■■□□□ 1.27
LMNB1-202ENST00000395354 GJA3Q9Y6H8 435 aa22.96■■□□□ 1.27
LMNB1-202ENST00000395354 ADD2P35612 726 aa22.95■■□□□ 1.26
LMNB1-202ENST00000395354 UBE3CQ15386 1083 aa22.95■■□□□ 1.26
LMNB1-202ENST00000395354 ADCK5Q3MIX3 580 aa22.95■■□□□ 1.26
LMNB1-202ENST00000395354 OSBP2Q969R2 916 aa22.95■■□□□ 1.26
LMNB1-202ENST00000395354 PDRG1Q9NUG6 133 aa22.95■■□□□ 1.26
LMNB1-202ENST00000395354 ZBTB12Q9Y330 459 aaPredicted RBP22.95■■□□□ 1.26
LMNB1-202ENST00000395354 PSME4Q14997 1843 aa22.94■■□□□ 1.26
LMNB1-202ENST00000395354 MYH7P12883 1935 aa22.94■■□□□ 1.26
LMNB1-202ENST00000395354 LDHBP07195 334 aaKnown RBP22.94■■□□□ 1.26
LMNB1-202ENST00000395354 PRDX5P30044 214 aa22.94■■□□□ 1.26
LMNB1-202ENST00000395354 RAB3GAP1Q15042 981 aa22.94■■□□□ 1.26
LMNB1-202ENST00000395354 GRIK5Q16478 980 aa22.94■■□□□ 1.26
LMNB1-202ENST00000395354 LIMCH1Q9UPQ0 1083 aa22.94■■□□□ 1.26
LMNB1-202ENST00000395354 ZC3H4Q9UPT8 1303 aaKnown RBP22.94■■□□□ 1.26
LMNB1-202ENST00000395354 M0R2C6 588 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms