RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 FBXL16Q8N461 479 aa21.39■■□□□ 1.01
PCDHA1-202ENST00000394633 CCDC69A6NI79 296 aa21.39■■□□□ 1.01
PCDHA1-202ENST00000394633 SKILP12757 684 aa21.39■■□□□ 1.01
PCDHA1-202ENST00000394633 NAA30Q147X3 362 aaPredicted RBP21.39■■□□□ 1.01
PCDHA1-202ENST00000394633 OSBP2Q969R2 916 aa21.39■■□□□ 1.01
PCDHA1-202ENST00000394633 ADALQ6DHV7 355 aa21.38■■□□□ 1.01
PCDHA1-202ENST00000394633 FILIP1Q7Z7B0 1213 aa21.38■■□□□ 1.01
PCDHA1-202ENST00000394633 MYH7P12883 1935 aa21.38■■□□□ 1.01
PCDHA1-202ENST00000394633 A0A1B0GVL5 298 aa21.37■■□□□ 1.01
PCDHA1-202ENST00000394633 FOXP2O15409 715 aa21.37■■□□□ 1.01
PCDHA1-202ENST00000394633 OTUD7BQ6GQQ9 843 aa21.37■■□□□ 1.01
PCDHA1-202ENST00000394633 NYAP1Q6ZVC0 841 aa21.37■■□□□ 1.01
PCDHA1-202ENST00000394633 FBXW7Q969H0 707 aa21.37■■□□□ 1.01
PCDHA1-202ENST00000394633 PUS3Q9BZE2 481 aaKnown RBP21.37■■□□□ 1.01
PCDHA1-202ENST00000394633 QTRT2Q9H974 415 aaKnown RBP21.37■■□□□ 1.01
PCDHA1-202ENST00000394633 ZNF330Q9Y3S2 320 aaPredicted RBP21.37■■□□□ 1.01
PCDHA1-202ENST00000394633 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.37■■□□□ 1.01
PCDHA1-202ENST00000394633 ZNF592Q92610 1267 aa21.37■■□□□ 1.01
PCDHA1-202ENST00000394633 CHMP4CQ96CF2 233 aa21.37■■□□□ 1.01
PCDHA1-202ENST00000394633 CLIC4Q9Y696 253 aa21.37■■□□□ 1.01
PCDHA1-202ENST00000394633 A0A1W2PQ27 194 aa21.36■■□□□ 1.01
PCDHA1-202ENST00000394633 A0A1W2PQ64 194 aa21.36■■□□□ 1.01
PCDHA1-202ENST00000394633 A0A1W2PQD8 194 aa21.36■■□□□ 1.01
PCDHA1-202ENST00000394633 CIAO1O76071 339 aa21.36■■□□□ 1.01
PCDHA1-202ENST00000394633 NDUFA8P51970 172 aa21.36■■□□□ 1.01
PCDHA1-202ENST00000394633 LINC00301Q8NCQ3 95 aa21.36■■□□□ 1.01
PCDHA1-202ENST00000394633 CYP19A1P11511 503 aaPredicted RBP21.36■■□□□ 1.01
PCDHA1-202ENST00000394633 NBPF11Q86T75 865 aa21.36■■□□□ 1.01
PCDHA1-202ENST00000394633 SDF4Q9BRK5 362 aa21.36■■□□□ 1.01
PCDHA1-202ENST00000394633 NAT10Q9H0A0 1025 aaKnown RBP21.36■■□□□ 1.01
PCDHA1-202ENST00000394633 C4AP0C0L4 1744 aa21.36■■□□□ 1.01
PCDHA1-202ENST00000394633 C4BP0C0L5 1744 aa21.36■■□□□ 1.01
PCDHA1-202ENST00000394633 HAND2P61296 217 aa21.35■■□□□ 1.01
PCDHA1-202ENST00000394633 NEDD4P46934 1319 aa21.35■■□□□ 1.01
PCDHA1-202ENST00000394633 ONECUT3O60422 494 aaPredicted RBP21.35■■□□□ 1.01
PCDHA1-202ENST00000394633 FKBP4Q02790 459 aaKnown RBP eCLIP21.35■■□□□ 1.01
PCDHA1-202ENST00000394633 PTPN14Q15678 1187 aa21.35■■□□□ 1.01
PCDHA1-202ENST00000394633 SEPT12Q8IYM1 358 aa21.35■■□□□ 1.01
PCDHA1-202ENST00000394633 CCDC191Q8NCU4 936 aa21.35■■□□□ 1.01
PCDHA1-202ENST00000394633 ZBTB3Q9H5J0 574 aa21.35■■□□□ 1.01
PCDHA1-202ENST00000394633 ZBTB1Q9Y2K1 713 aa21.35■■□□□ 1.01
PCDHA1-202ENST00000394633 STARD3NLO95772 234 aa21.34■■□□□ 1.01
PCDHA1-202ENST00000394633 STK38Q15208 465 aa21.34■■□□□ 1.01
PCDHA1-202ENST00000394633 C8orf76Q96K31 380 aa21.34■■□□□ 1.01
PCDHA1-202ENST00000394633 FEZ1Q99689 392 aa21.34■■□□□ 1.01
PCDHA1-202ENST00000394633 CTNNA3Q9UI47 895 aa21.34■■□□□ 1.01
PCDHA1-202ENST00000394633 LOC102724428A0A0B4J2F2 783 aa21.33■■□□□ 1.01
PCDHA1-202ENST00000394633 SIK1P57059 783 aa21.33■■□□□ 1.01
PCDHA1-202ENST00000394633 DPCR1Q3MIW9 517 aa21.33■■□□□ 1.01
PCDHA1-202ENST00000394633 TEX13AQ9BXU3 409 aaPredicted RBP21.33■■□□□ 1.01
PCDHA1-202ENST00000394633 KIAA1468Q9P260 1216 aa21.33■■□□□ 1.01
PCDHA1-202ENST00000394633 HPS5Q9UPZ3 1129 aa21.33■■□□□ 1.01
PCDHA1-202ENST00000394633 YEATS4O95619 227 aa21.33■■□□□ 1
PCDHA1-202ENST00000394633 POLR3DP05423 398 aaPredicted RBP21.33■■□□□ 1
PCDHA1-202ENST00000394633 ADORA1P30542 326 aa21.33■■□□□ 1
PCDHA1-202ENST00000394633 MB21D2Q8IYB1 491 aaPredicted RBP21.33■■□□□ 1
PCDHA1-202ENST00000394633 CCAR2Q8N163 923 aaKnown RBP21.33■■□□□ 1
PCDHA1-202ENST00000394633 TRMT1Q9NXH9 659 aaKnown RBP21.33■■□□□ 1
PCDHA1-202ENST00000394633 MYH14Q7Z406 1995 aaKnown RBP21.32■■□□□ 1
PCDHA1-202ENST00000394633 KLF18A0A0U1RQI7 1052 aa21.32■■□□□ 1
PCDHA1-202ENST00000394633 PRC1O43663 620 aa21.32■■□□□ 1
PCDHA1-202ENST00000394633 ITPK1Q13572 414 aa21.32■■□□□ 1
PCDHA1-202ENST00000394633 SF3A1Q15459 793 aaKnown RBP21.32■■□□□ 1
PCDHA1-202ENST00000394633 IMMTQ16891 758 aaKnown RBP21.32■■□□□ 1
PCDHA1-202ENST00000394633 FBXO18Q8NFZ0 1043 aa21.32■■□□□ 1
PCDHA1-202ENST00000394633 KCNG4Q8TDN1 519 aa21.32■■□□□ 1
PCDHA1-202ENST00000394633 GTPBP4Q9BZE4 634 aaKnown RBP21.32■■□□□ 1
PCDHA1-202ENST00000394633 OSBPL5Q9H0X9 879 aaPredicted RBP21.32■■□□□ 1
PCDHA1-202ENST00000394633 KCND1Q9NSA2 647 aa21.32■■□□□ 1
PCDHA1-202ENST00000394633 POLR3EQ9NVU0 708 aa21.32■■□□□ 1
PCDHA1-202ENST00000394633 CEP126Q9P2H0 1117 aa21.32■■□□□ 1
PCDHA1-202ENST00000394633 CGNQ9P2M7 1197 aaKnown RBP21.32■■□□□ 1
PCDHA1-202ENST00000394633 BTAF1O14981 1849 aa21.32■■□□□ 1
PCDHA1-202ENST00000394633 ATP6V1AP38606 617 aa21.32■■□□□ 1
PCDHA1-202ENST00000394633 KCNQ4P56696 695 aa21.32■■□□□ 1
PCDHA1-202ENST00000394633 GJB4Q9NTQ9 266 aa21.32■■□□□ 1
PCDHA1-202ENST00000394633 ORC3Q9UBD5 711 aaPredicted RBP21.32■■□□□ 1
PCDHA1-202ENST00000394633 SPTLC2O15270 562 aa21.31■■□□□ 1
PCDHA1-202ENST00000394633 FGAP02671 866 aa21.31■■□□□ 1
PCDHA1-202ENST00000394633 GSDMDP57764 484 aa21.31■■□□□ 1
PCDHA1-202ENST00000394633 ANTXR2P58335 489 aa21.31■■□□□ 1
PCDHA1-202ENST00000394633 WASHC4Q2M389 1173 aa21.31■■□□□ 1
PCDHA1-202ENST00000394633 TTC39AQ5SRH9 613 aa21.31■■□□□ 1
PCDHA1-202ENST00000394633 MYSM1Q5VVJ2 828 aa21.31■■□□□ 1
PCDHA1-202ENST00000394633 BPIFA3Q9BQP9 254 aa21.31■■□□□ 1
PCDHA1-202ENST00000394633 NHSQ6T4R5 1651 aa21.31■■□□□ 1
PCDHA1-202ENST00000394633 SBF2Q86WG5 1849 aa21.31■■□□□ 1
PCDHA1-202ENST00000394633 GOLGA8BA8MQT2 603 aa21.31■■□□□ 1
PCDHA1-202ENST00000394633 RAB11FIP4Q86YS3 637 aa21.31■■□□□ 1
PCDHA1-202ENST00000394633 ZHX1Q9UKY1 873 aaPredicted RBP21.31■■□□□ 1
PCDHA1-202ENST00000394633 KIF28PB7ZC32 967 aa21.3■■□□□ 1
PCDHA1-202ENST00000394633 SCARF1Q14162 830 aa21.3■■□□□ 1
PCDHA1-202ENST00000394633 CCDC158Q5M9N0 1113 aa21.3■■□□□ 1
PCDHA1-202ENST00000394633 XAGE2Q96GT9 111 aa21.3■■□□□ 1
PCDHA1-202ENST00000394633 OGFRQ9NZT2 677 aa21.3■■□□□ 1
PCDHA1-202ENST00000394633 IMPACTQ9P2X3 320 aa21.3■■□□□ 1
PCDHA1-202ENST00000394633 BRWD3Q6RI45 1802 aa21.3■■□□□ 1
PCDHA1-202ENST00000394633 LRRFIP1Q32MZ4 808 aaKnown RBP21.29■■□□□ 1
PCDHA1-202ENST00000394633 HSP90AB3PQ58FF7 597 aa21.29■■□□□ 1
PCDHA1-202ENST00000394633 BRAPQ7Z569 592 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms