RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 PPFIA3O75145 1194 aa18.13■□□□□ 0.49
PTBP1-204ENST00000394601 CCDC158Q5M9N0 1113 aa18.13■□□□□ 0.49
PTBP1-204ENST00000394601 DENND2AQ9ULE3 1009 aa18.13■□□□□ 0.49
PTBP1-204ENST00000394601 ARID5BQ14865 1188 aa18.12■□□□□ 0.49
PTBP1-204ENST00000394601 HSP90AB3PQ58FF7 597 aa18.12■□□□□ 0.49
PTBP1-204ENST00000394601 TTC39AQ5SRH9 613 aa18.12■□□□□ 0.49
PTBP1-204ENST00000394601 NEDD4P46934 1319 aa18.12■□□□□ 0.49
PTBP1-204ENST00000394601 ELF2Q15723 593 aa18.12■□□□□ 0.49
PTBP1-204ENST00000394601 PLA2G4DQ86XP0 818 aa18.12■□□□□ 0.49
PTBP1-204ENST00000394601 APPBP2Q92624 585 aa18.12■□□□□ 0.49
PTBP1-204ENST00000394601 RREB1Q92766 1687 aa18.12■□□□□ 0.49
PTBP1-204ENST00000394601 UBN2Q6ZU65 1347 aa18.12■□□□□ 0.49
PTBP1-204ENST00000394601 H3BQV1 296 aa18.12■□□□□ 0.49
PTBP1-204ENST00000394601 ZFYP08048 801 aaPredicted RBP18.12■□□□□ 0.49
PTBP1-204ENST00000394601 ITGA6P23229 1130 aa18.12■□□□□ 0.49
PTBP1-204ENST00000394601 CEBPZQ03701 1054 aaKnown RBP18.12■□□□□ 0.49
PTBP1-204ENST00000394601 IFIT5Q13325 482 aaKnown RBP18.12■□□□□ 0.49
PTBP1-204ENST00000394601 IFFO2Q5TF58 517 aa18.12■□□□□ 0.49
PTBP1-204ENST00000394601 TDRD7Q8NHU6 1098 aaKnown RBP18.12■□□□□ 0.49
PTBP1-204ENST00000394601 CFAP45Q9UL16 551 aa18.12■□□□□ 0.49
PTBP1-204ENST00000394601 DOT1LQ8TEK3 1739 aa18.11■□□□□ 0.49
PTBP1-204ENST00000394601 SKIDA1Q1XH10 827 aa18.11■□□□□ 0.49
PTBP1-204ENST00000394601 CTNNA3Q9UI47 895 aa18.11■□□□□ 0.49
PTBP1-204ENST00000394601 CTSWP56202 376 aa18.11■□□□□ 0.49
PTBP1-204ENST00000394601 EVA1CP58658 441 aa18.11■□□□□ 0.49
PTBP1-204ENST00000394601 KIF6Q6ZMV9 814 aa18.11■□□□□ 0.49
PTBP1-204ENST00000394601 ZNF215Q9UL58 517 aaPredicted RBP18.11■□□□□ 0.49
PTBP1-204ENST00000394601 PHLPP1O60346 1717 aa18.11■□□□□ 0.49
PTBP1-204ENST00000394601 SLFN14P0C7P3 912 aa18.1■□□□□ 0.49
PTBP1-204ENST00000394601 HAND2P61296 217 aa18.1■□□□□ 0.49
PTBP1-204ENST00000394601 IQCB1Q15051 598 aa18.1■□□□□ 0.49
PTBP1-204ENST00000394601 BTG4Q9NY30 223 aa18.1■□□□□ 0.49
PTBP1-204ENST00000394601 ZBTB1Q9Y2K1 713 aa18.1■□□□□ 0.49
PTBP1-204ENST00000394601 COL22A1Q8NFW1 1626 aaPredicted RBP18.1■□□□□ 0.49
PTBP1-204ENST00000394601 COL4A1P02462 1669 aa18.1■□□□□ 0.49
PTBP1-204ENST00000394601 TCRBV5S4A2TA0A5A2 114 aa18.1■□□□□ 0.49
PTBP1-204ENST00000394601 ADD2P35612 726 aa18.1■□□□□ 0.49
PTBP1-204ENST00000394601 ZNF330Q9Y3S2 320 aaPredicted RBP18.1■□□□□ 0.49
PTBP1-204ENST00000394601 GPAA1O43292 621 aa18.09■□□□□ 0.49
PTBP1-204ENST00000394601 STARD3NLO95772 234 aa18.09■□□□□ 0.49
PTBP1-204ENST00000394601 GPTP24298 496 aa18.09■□□□□ 0.49
PTBP1-204ENST00000394601 KRT222Q8N1A0 295 aa18.09■□□□□ 0.49
PTBP1-204ENST00000394601 PIH1D3Q9NQM4 214 aaKnown RBP18.09■□□□□ 0.49
PTBP1-204ENST00000394601 ATL3Q6DD88 541 aa18.08■□□□□ 0.49
PTBP1-204ENST00000394601 FEZ1Q99689 392 aa18.08■□□□□ 0.49
PTBP1-204ENST00000394601 TERF2Q15554 542 aa18.08■□□□□ 0.48
PTBP1-204ENST00000394601 DNAJC25Q9H1X3 360 aa18.08■□□□□ 0.48
PTBP1-204ENST00000394601 CHD4Q14839 1912 aa18.08■□□□□ 0.48
PTBP1-204ENST00000394601 WDR19Q8NEZ3 1342 aa18.08■□□□□ 0.48
PTBP1-204ENST00000394601 FGFR2P21802 821 aa18.07■□□□□ 0.48
PTBP1-204ENST00000394601 NEK11Q8NG66 645 aa18.07■□□□□ 0.48
PTBP1-204ENST00000394601 BICD2Q8TD16 824 aa18.07■□□□□ 0.48
PTBP1-204ENST00000394601 ANKRD7Q92527 254 aa18.07■□□□□ 0.48
PTBP1-204ENST00000394601 BCORQ6W2J9 1755 aa18.07■□□□□ 0.48
PTBP1-204ENST00000394601 PRC1O43663 620 aa18.07■□□□□ 0.48
PTBP1-204ENST00000394601 ARID4AP29374 1257 aaPredicted RBP18.07■□□□□ 0.48
PTBP1-204ENST00000394601 GUCY1B3Q02153 619 aa18.07■□□□□ 0.48
PTBP1-204ENST00000394601 IMMTQ16891 758 aaKnown RBP18.07■□□□□ 0.48
PTBP1-204ENST00000394601 C11orf57Q6ZUT1 292 aaPredicted RBP18.07■□□□□ 0.48
PTBP1-204ENST00000394601 CCAR1Q8IX12 1150 aaKnown RBP18.07■□□□□ 0.48
PTBP1-204ENST00000394601 ZNF34Q8IZ26 560 aa18.07■□□□□ 0.48
PTBP1-204ENST00000394601 CICQ96RK0 1608 aaPredicted RBP18.07■□□□□ 0.48
PTBP1-204ENST00000394601 WASHC4Q2M389 1173 aa18.07■□□□□ 0.48
PTBP1-204ENST00000394601 TAF3Q5VWG9 929 aa18.07■□□□□ 0.48
PTBP1-204ENST00000394601 LDHAL6AQ6ZMR3 332 aa18.07■□□□□ 0.48
PTBP1-204ENST00000394601 TBC1D10CQ8IV04 446 aa18.07■□□□□ 0.48
PTBP1-204ENST00000394601 GJB4Q9NTQ9 266 aa18.07■□□□□ 0.48
PTBP1-204ENST00000394601 USP27XA6NNY8 438 aa18.06■□□□□ 0.48
PTBP1-204ENST00000394601 PDE8BO95263 885 aa18.06■□□□□ 0.48
PTBP1-204ENST00000394601 OTUD7BQ6GQQ9 843 aa18.06■□□□□ 0.48
PTBP1-204ENST00000394601 RTEL1Q9NZ71 1219 aa18.06■□□□□ 0.48
PTBP1-204ENST00000394601 TACC3Q9Y6A5 838 aa18.06■□□□□ 0.48
PTBP1-204ENST00000394601 MYH14Q7Z406 1995 aaKnown RBP18.06■□□□□ 0.48
PTBP1-204ENST00000394601 IRS4O14654 1257 aaPredicted RBP18.06■□□□□ 0.48
PTBP1-204ENST00000394601 ZNF75DP51815 510 aa18.06■□□□□ 0.48
PTBP1-204ENST00000394601 KMT5BQ4FZB7 885 aa18.06■□□□□ 0.48
PTBP1-204ENST00000394601 METTL24Q5JXM2 366 aa18.06■□□□□ 0.48
PTBP1-204ENST00000394601 TIAM2Q8IVF5 1701 aa18.06■□□□□ 0.48
PTBP1-204ENST00000394601 KIF28PB7ZC32 967 aa18.05■□□□□ 0.48
PTBP1-204ENST00000394601 CEP135Q66GS9 1140 aa18.05■□□□□ 0.48
PTBP1-204ENST00000394601 CYB5R4Q7L1T6 521 aa18.05■□□□□ 0.48
PTBP1-204ENST00000394601 PCDHA7Q9UN72 937 aa18.05■□□□□ 0.48
PTBP1-204ENST00000394601 LAMB2P55268 1798 aa18.05■□□□□ 0.48
PTBP1-204ENST00000394601 KDM4FA0A1W2PPD8 638 aa18.05■□□□□ 0.48
PTBP1-204ENST00000394601 FMR1NBQ8N0W7 255 aaPredicted RBP18.05■□□□□ 0.48
PTBP1-204ENST00000394601 KIF18AQ8NI77 898 aa18.05■□□□□ 0.48
PTBP1-204ENST00000394601 PHKA1P46020 1223 aa18.05■□□□□ 0.48
PTBP1-204ENST00000394601 ZNF165P49910 485 aa18.05■□□□□ 0.48
PTBP1-204ENST00000394601 FAM177A1Q8N128 213 aaPredicted RBP18.05■□□□□ 0.48
PTBP1-204ENST00000394601 FBXO18Q8NFZ0 1043 aa18.05■□□□□ 0.48
PTBP1-204ENST00000394601 CLIP2Q9UDT6 1046 aa18.05■□□□□ 0.48
PTBP1-204ENST00000394601 A0A1B0GUL6 1792 aa18.04■□□□□ 0.48
PTBP1-204ENST00000394601 CASZ1Q86V15 1759 aa18.04■□□□□ 0.48
PTBP1-204ENST00000394601 ERVV-1B6SEH8 477 aa18.04■□□□□ 0.48
PTBP1-204ENST00000394601 LINC00301Q8NCQ3 95 aa18.04■□□□□ 0.48
PTBP1-204ENST00000394601 ERCC4Q92889 916 aaPredicted RBP18.04■□□□□ 0.48
PTBP1-204ENST00000394601 SENP2Q9HC62 589 aa18.04■□□□□ 0.48
PTBP1-204ENST00000394601 DDX41Q9UJV9 622 aaKnown RBP18.04■□□□□ 0.48
PTBP1-204ENST00000394601 LRRFIP1Q32MZ4 808 aaKnown RBP18.04■□□□□ 0.48
PTBP1-204ENST00000394601 CCDC102BQ68D86 513 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms