RNA–Protein interactions for RNA: ENST00000394013.6

RNF41-202, Transcript of ring finger protein 41, humanhuman

TSL 1 (best) BASIC

Gene RNF41, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-202ENST00000394013 A0A1B0GUL6 1792 aa16.9■□□□□ 0.3
RNF41-202ENST00000394013 NPHP1O15259 732 aa16.9■□□□□ 0.3
RNF41-202ENST00000394013 ATRNO75882 1429 aa16.9■□□□□ 0.3
RNF41-202ENST00000394013 C4AP0C0L4 1744 aa16.9■□□□□ 0.3
RNF41-202ENST00000394013 C4BP0C0L5 1744 aa16.9■□□□□ 0.3
RNF41-202ENST00000394013 NFIXQ14938 502 aa16.9■□□□□ 0.3
RNF41-202ENST00000394013 AGXT2Q9BYV1 514 aa16.9■□□□□ 0.3
RNF41-202ENST00000394013 BSDC1Q9NW68 430 aaPredicted RBP16.9■□□□□ 0.3
RNF41-202ENST00000394013 LRP2BPQ9P2M1 347 aa16.9■□□□□ 0.3
RNF41-202ENST00000394013 TRPC5Q9UL62 973 aaPredicted RBP16.9■□□□□ 0.3
RNF41-202ENST00000394013 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.9■□□□□ 0.3
RNF41-202ENST00000394013 PTPDC1A2A3K4 754 aa16.9■□□□□ 0.3
RNF41-202ENST00000394013 B4E1Z4 1266 aa16.9■□□□□ 0.3
RNF41-202ENST00000394013 OTUD7BQ6GQQ9 843 aa16.9■□□□□ 0.3
RNF41-202ENST00000394013 FAM84BQ96KN1 310 aaPredicted RBP16.9■□□□□ 0.3
RNF41-202ENST00000394013 LY75O60449 1722 aa16.89■□□□□ 0.3
RNF41-202ENST00000394013 HMGB1P09429 215 aaKnown RBP16.89■□□□□ 0.29
RNF41-202ENST00000394013 TM4SF1P30408 202 aa16.89■□□□□ 0.29
RNF41-202ENST00000394013 EVX2Q03828 476 aa16.89■□□□□ 0.29
RNF41-202ENST00000394013 SLC10A5Q5PT55 438 aa16.89■□□□□ 0.29
RNF41-202ENST00000394013 TRAPPC3LQ5T215 181 aa16.89■□□□□ 0.29
RNF41-202ENST00000394013 ZSCAN25Q6NSZ9 544 aa16.89■□□□□ 0.29
RNF41-202ENST00000394013 ZNF384Q8TF68 577 aa16.89■□□□□ 0.29
RNF41-202ENST00000394013 NLRP3Q96P20 1036 aa16.89■□□□□ 0.29
RNF41-202ENST00000394013 FTOQ9C0B1 505 aaKnown RBP eCLIP16.89■□□□□ 0.29
RNF41-202ENST00000394013 CTNNA3Q9UI47 895 aa16.89■□□□□ 0.29
RNF41-202ENST00000394013 ONECUT3O60422 494 aaPredicted RBP16.89■□□□□ 0.29
RNF41-202ENST00000394013 RPS8P62241 208 aaKnown RBP16.89■□□□□ 0.29
RNF41-202ENST00000394013 MAP3K12Q12852 859 aa16.89■□□□□ 0.29
RNF41-202ENST00000394013 TTC6Q86TZ1 520 aa16.89■□□□□ 0.29
RNF41-202ENST00000394013 SDR42E1Q8WUS8 393 aa16.89■□□□□ 0.29
RNF41-202ENST00000394013 DOCK2Q92608 1830 aa16.89■□□□□ 0.29
RNF41-202ENST00000394013 ZNF445P59923 1031 aa16.88■□□□□ 0.29
RNF41-202ENST00000394013 CCDC144CPQ8IYA2 1237 aa16.88■□□□□ 0.29
RNF41-202ENST00000394013 HPS5Q9UPZ3 1129 aa16.88■□□□□ 0.29
RNF41-202ENST00000394013 KLF18A0A0U1RQI7 1052 aa16.88■□□□□ 0.29
RNF41-202ENST00000394013 GSG1L2A8MUP6 293 aa16.88■□□□□ 0.29
RNF41-202ENST00000394013 IFNL3Q8IZI9 196 aa16.88■□□□□ 0.29
RNF41-202ENST00000394013 RNF214Q8ND24 703 aa16.88■□□□□ 0.29
RNF41-202ENST00000394013 MYL10Q9BUA6 226 aa16.88■□□□□ 0.29
RNF41-202ENST00000394013 RAI14Q9P0K7 980 aa16.88■□□□□ 0.29
RNF41-202ENST00000394013 FDPSP14324 419 aaKnown RBP16.87■□□□□ 0.29
RNF41-202ENST00000394013 DYNLL1P63167 89 aaKnown RBP16.87■□□□□ 0.29
RNF41-202ENST00000394013 CEBPZQ03701 1054 aaKnown RBP16.87■□□□□ 0.29
RNF41-202ENST00000394013 TPTE2Q6XPS3 522 aa16.87■□□□□ 0.29
RNF41-202ENST00000394013 NCOA7Q8NI08 942 aa16.87■□□□□ 0.29
RNF41-202ENST00000394013 SMARCC2Q8TAQ2 1214 aa16.87■□□□□ 0.29
RNF41-202ENST00000394013 CYP7A1P22680 504 aa16.87■□□□□ 0.29
RNF41-202ENST00000394013 RALYLQ86SE5 291 aaKnown RBP16.87■□□□□ 0.29
RNF41-202ENST00000394013 SLC4A4Q9Y6R1 1079 aa16.87■□□□□ 0.29
RNF41-202ENST00000394013 ZNF804BA4D1E1 1349 aa16.86■□□□□ 0.29
RNF41-202ENST00000394013 BRWD3Q6RI45 1802 aa16.86■□□□□ 0.29
RNF41-202ENST00000394013 UBE2Q2LH0YL09 131 aa16.86■□□□□ 0.29
RNF41-202ENST00000394013 MCM5P33992 734 aa16.86■□□□□ 0.29
RNF41-202ENST00000394013 AEBP2Q6ZN18 517 aaPredicted RBP16.86■□□□□ 0.29
RNF41-202ENST00000394013 TICAM2Q86XR7 235 aa16.86■□□□□ 0.29
RNF41-202ENST00000394013 VPS37DQ86XT2 251 aa16.86■□□□□ 0.29
RNF41-202ENST00000394013 TMEM87AQ8NBN3 555 aa16.86■□□□□ 0.29
RNF41-202ENST00000394013 ZKSCAN3Q9BRR0 538 aa16.86■□□□□ 0.29
RNF41-202ENST00000394013 BCL11BQ9C0K0 894 aaPredicted RBP16.86■□□□□ 0.29
RNF41-202ENST00000394013 COL24A1Q17RW2 1714 aa16.86■□□□□ 0.29
RNF41-202ENST00000394013 CYP2D7A0A087X1C5 515 aa16.86■□□□□ 0.29
RNF41-202ENST00000394013 GOLGA8BA8MQT2 603 aa16.86■□□□□ 0.29
RNF41-202ENST00000394013 CHAF1AQ13111 956 aaPredicted RBP16.86■□□□□ 0.29
RNF41-202ENST00000394013 FAM184AQ8NB25 1140 aa16.86■□□□□ 0.29
RNF41-202ENST00000394013 NYXQ9GZU5 481 aa16.86■□□□□ 0.29
RNF41-202ENST00000394013 MBD3O95983 291 aa16.85■□□□□ 0.29
RNF41-202ENST00000394013 RRP12Q5JTH9 1297 aaKnown RBP16.85■□□□□ 0.29
RNF41-202ENST00000394013 PATL2C9JE40 543 aaKnown RBP16.85■□□□□ 0.29
RNF41-202ENST00000394013 H3BQV1 296 aa16.85■□□□□ 0.29
RNF41-202ENST00000394013 RESTQ13127 1097 aa16.85■□□□□ 0.29
RNF41-202ENST00000394013 IFFO2Q5TF58 517 aa16.85■□□□□ 0.29
RNF41-202ENST00000394013 PROM2Q8N271 834 aa16.85■□□□□ 0.29
RNF41-202ENST00000394013 NAPBQ9H115 298 aa16.85■□□□□ 0.29
RNF41-202ENST00000394013 UBE4AQ14139 1066 aa16.84■□□□□ 0.29
RNF41-202ENST00000394013 AIFM3Q96NN9 605 aa16.84■□□□□ 0.29
RNF41-202ENST00000394013 SALL1Q9NSC2 1324 aa16.84■□□□□ 0.29
RNF41-202ENST00000394013 NASPP49321 788 aaPredicted RBP16.84■□□□□ 0.29
RNF41-202ENST00000394013 SLC4A8Q2Y0W8 1093 aa16.84■□□□□ 0.29
RNF41-202ENST00000394013 CARMIL3Q8ND23 1372 aa16.83■□□□□ 0.29
RNF41-202ENST00000394013 GYS1P13807 737 aa16.83■□□□□ 0.28
RNF41-202ENST00000394013 PDCP20941 246 aa16.83■□□□□ 0.28
RNF41-202ENST00000394013 ADD1P35611 737 aaKnown RBP16.83■□□□□ 0.28
RNF41-202ENST00000394013 TDO2P48775 406 aa16.83■□□□□ 0.28
RNF41-202ENST00000394013 PRR5LQ6MZQ0 368 aa16.83■□□□□ 0.28
RNF41-202ENST00000394013 LRSAM1Q6UWE0 723 aa16.83■□□□□ 0.28
RNF41-202ENST00000394013 ZNF274Q96GC6 653 aaPredicted RBP16.83■□□□□ 0.28
RNF41-202ENST00000394013 TOMM22Q9NS69 142 aa16.83■□□□□ 0.28
RNF41-202ENST00000394013 LIG1P18858 919 aa16.82■□□□□ 0.28
RNF41-202ENST00000394013 PRDX5P30044 214 aa16.82■□□□□ 0.28
RNF41-202ENST00000394013 UBE2HP62256 183 aa16.82■□□□□ 0.28
RNF41-202ENST00000394013 ZSWIM5Q9P217 1185 aa16.82■□□□□ 0.28
RNF41-202ENST00000394013 ATP6V1DQ9Y5K8 247 aa16.82■□□□□ 0.28
RNF41-202ENST00000394013 CAVIN4Q5BKX8 364 aa16.82■□□□□ 0.28
RNF41-202ENST00000394013 KRT27Q7Z3Y8 459 aa16.82■□□□□ 0.28
RNF41-202ENST00000394013 CNBD1Q8NA66 436 aa16.82■□□□□ 0.28
RNF41-202ENST00000394013 CACNA1SQ13698 1873 aa16.82■□□□□ 0.28
RNF41-202ENST00000394013 BAZ2AQ9UIF9 1905 aaKnown RBP16.82■□□□□ 0.28
RNF41-202ENST00000394013 MINDY4BA8MYZ0 360 aa16.81■□□□□ 0.28
RNF41-202ENST00000394013 CDC27P30260 824 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms