RNA–Protein interactions for RNA: ENST00000393448.6

RUFY1-203, Transcript of RUN and FYVE domain containing 1, humanhuman

TSL 1 (best)

Gene RUFY1, Length 2,320 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY1-203ENST00000393448 MYH13Q9UKX3 1938 aa20.75■□□□□ 0.91
RUFY1-203ENST00000393448 CRY2Q49AN0 593 aa20.75■□□□□ 0.91
RUFY1-203ENST00000393448 GTF3C6Q969F1 213 aa20.75■□□□□ 0.91
RUFY1-203ENST00000393448 LMBRD1Q9NUN5 540 aa20.75■□□□□ 0.91
RUFY1-203ENST00000393448 PRPF40AO75400 957 aaKnown RBP20.74■□□□□ 0.91
RUFY1-203ENST00000393448 PATL2C9JE40 543 aaKnown RBP20.73■□□□□ 0.91
RUFY1-203ENST00000393448 JAK2O60674 1132 aa20.73■□□□□ 0.91
RUFY1-203ENST00000393448 ZSCAN22P10073 491 aaPredicted RBP20.73■□□□□ 0.91
RUFY1-203ENST00000393448 CHAF1AQ13111 956 aaPredicted RBP20.73■□□□□ 0.91
RUFY1-203ENST00000393448 POTEAQ6S8J7 498 aa20.73■□□□□ 0.91
RUFY1-203ENST00000393448 MB21D2Q8IYB1 491 aaPredicted RBP20.73■□□□□ 0.91
RUFY1-203ENST00000393448 IFNL3Q8IZI9 196 aa20.73■□□□□ 0.91
RUFY1-203ENST00000393448 ZNF384Q8TF68 577 aa20.73■□□□□ 0.91
RUFY1-203ENST00000393448 INCENPQ9NQS7 918 aa20.73■□□□□ 0.91
RUFY1-203ENST00000393448 NAP1L2Q9ULW6 460 aaPredicted RBP20.73■□□□□ 0.91
RUFY1-203ENST00000393448 GSG1L2A8MUP6 293 aa20.73■□□□□ 0.91
RUFY1-203ENST00000393448 SCRN1Q12765 414 aa20.73■□□□□ 0.91
RUFY1-203ENST00000393448 AGXT2Q9BYV1 514 aa20.73■□□□□ 0.91
RUFY1-203ENST00000393448 IRS2Q9Y4H2 1338 aa20.73■□□□□ 0.91
RUFY1-203ENST00000393448 CACNA1SQ13698 1873 aa20.73■□□□□ 0.91
RUFY1-203ENST00000393448 TCHHQ07283 1943 aa20.73■□□□□ 0.91
RUFY1-203ENST00000393448 ANTXR2P58335 489 aa20.72■□□□□ 0.91
RUFY1-203ENST00000393448 SLC4A4Q9Y6R1 1079 aa20.72■□□□□ 0.91
RUFY1-203ENST00000393448 CCT2P78371 535 aaKnown RBP20.72■□□□□ 0.91
RUFY1-203ENST00000393448 NCOA7Q8NI08 942 aa20.72■□□□□ 0.91
RUFY1-203ENST00000393448 PRC1O43663 620 aa20.71■□□□□ 0.91
RUFY1-203ENST00000393448 RALYLQ86SE5 291 aaKnown RBP20.71■□□□□ 0.91
RUFY1-203ENST00000393448 NAPBQ9H115 298 aa20.71■□□□□ 0.91
RUFY1-203ENST00000393448 GDPD2Q9HCC8 539 aa20.71■□□□□ 0.91
RUFY1-203ENST00000393448 MTMR6Q9Y217 621 aa20.71■□□□□ 0.91
RUFY1-203ENST00000393448 DDX49Q9Y6V7 483 aaKnown RBP20.71■□□□□ 0.91
RUFY1-203ENST00000393448 VPS37CA5D8V6 355 aaPredicted RBP20.71■□□□□ 0.91
RUFY1-203ENST00000393448 PPFIA3O75145 1194 aa20.71■□□□□ 0.91
RUFY1-203ENST00000393448 GPSM2P81274 684 aa20.71■□□□□ 0.91
RUFY1-203ENST00000393448 CTDSPL2Q05D32 466 aa20.71■□□□□ 0.91
RUFY1-203ENST00000393448 LARP1BQ659C4 914 aaKnown RBP20.71■□□□□ 0.91
RUFY1-203ENST00000393448 NCOA5Q9HCD5 579 aaKnown RBP20.71■□□□□ 0.91
RUFY1-203ENST00000393448 NSFL1CQ9UNZ2 370 aaKnown RBP20.71■□□□□ 0.91
RUFY1-203ENST00000393448 GOLGB1Q14789 3259 aaKnown RBP20.7■□□□□ 0.91
RUFY1-203ENST00000393448 MCM5P33992 734 aa20.7■□□□□ 0.9
RUFY1-203ENST00000393448 SDR42E1Q8WUS8 393 aa20.7■□□□□ 0.9
RUFY1-203ENST00000393448 RBM17Q96I25 401 aaKnown RBP20.7■□□□□ 0.9
RUFY1-203ENST00000393448 XDHP47989 1333 aa20.7■□□□□ 0.9
RUFY1-203ENST00000393448 PFKFB2O60825 505 aa20.7■□□□□ 0.9
RUFY1-203ENST00000393448 F13A1P00488 732 aa20.7■□□□□ 0.9
RUFY1-203ENST00000393448 PTMSP20962 102 aa20.7■□□□□ 0.9
RUFY1-203ENST00000393448 NEDD4P46934 1319 aa20.7■□□□□ 0.9
RUFY1-203ENST00000393448 DYNLL1P63167 89 aaKnown RBP20.7■□□□□ 0.9
RUFY1-203ENST00000393448 SKOR2Q2VWA4 1001 aaPredicted RBP20.7■□□□□ 0.9
RUFY1-203ENST00000393448 MSL1Q68DK7 614 aa20.7■□□□□ 0.9
RUFY1-203ENST00000393448 PNPLA7Q6ZV29 1317 aa20.7■□□□□ 0.9
RUFY1-203ENST00000393448 STK11IPQ8N1F8 1099 aa20.7■□□□□ 0.9
RUFY1-203ENST00000393448 DDX11Q96FC9 970 aa20.7■□□□□ 0.9
RUFY1-203ENST00000393448 TNS1Q9HBL0 1735 aaKnown RBP20.7■□□□□ 0.9
RUFY1-203ENST00000393448 TACC3Q9Y6A5 838 aa20.7■□□□□ 0.9
RUFY1-203ENST00000393448 SEMA3EO15041 775 aa20.69■□□□□ 0.9
RUFY1-203ENST00000393448 PRDX5P30044 214 aa20.69■□□□□ 0.9
RUFY1-203ENST00000393448 MAGEB6P1A0A0J9YX57 407 aa20.69■□□□□ 0.9
RUFY1-203ENST00000393448 PDIA3P30101 505 aaKnown RBP20.69■□□□□ 0.9
RUFY1-203ENST00000393448 TDO2P48775 406 aa20.69■□□□□ 0.9
RUFY1-203ENST00000393448 ALX1Q15699 326 aa20.69■□□□□ 0.9
RUFY1-203ENST00000393448 NAA16Q6N069 864 aaPredicted RBP20.69■□□□□ 0.9
RUFY1-203ENST00000393448 CYB5R4Q7L1T6 521 aa20.69■□□□□ 0.9
RUFY1-203ENST00000393448 RAB11FIP4Q86YS3 637 aa20.69■□□□□ 0.9
RUFY1-203ENST00000393448 ANKRD31Q8N7Z5 1873 aa20.68■□□□□ 0.9
RUFY1-203ENST00000393448 B4E1Z4 1266 aa20.68■□□□□ 0.9
RUFY1-203ENST00000393448 MECOMQ03112 1051 aa20.68■□□□□ 0.9
RUFY1-203ENST00000393448 BRPF3Q9ULD4 1205 aa20.68■□□□□ 0.9
RUFY1-203ENST00000393448 LEMD3Q9Y2U8 911 aa20.68■□□□□ 0.9
RUFY1-203ENST00000393448 NCLP19338 710 aaKnown RBP20.67■□□□□ 0.9
RUFY1-203ENST00000393448 TRDNQ13061 729 aa20.67■□□□□ 0.9
RUFY1-203ENST00000393448 CDC37L1Q7L3B6 337 aa20.67■□□□□ 0.9
RUFY1-203ENST00000393448 NLGN1Q8N2Q7 840 aa20.67■□□□□ 0.9
RUFY1-203ENST00000393448 NSUN4Q96CB9 384 aaKnown RBP20.67■□□□□ 0.9
RUFY1-203ENST00000393448 RIOK1Q9BRS2 568 aaKnown RBP20.67■□□□□ 0.9
RUFY1-203ENST00000393448 CHD4Q14839 1912 aa20.67■□□□□ 0.9
RUFY1-203ENST00000393448 SMIM22K7EJ46 135 aa20.67■□□□□ 0.9
RUFY1-203ENST00000393448 CTDNEP1O95476 244 aa20.67■□□□□ 0.9
RUFY1-203ENST00000393448 FERMT3Q86UX7 667 aa20.67■□□□□ 0.9
RUFY1-203ENST00000393448 UFL1O94874 794 aa20.66■□□□□ 0.9
RUFY1-203ENST00000393448 GNAT2P19087 354 aa20.66■□□□□ 0.9
RUFY1-203ENST00000393448 KLHL40Q2TBA0 621 aa20.66■□□□□ 0.9
RUFY1-203ENST00000393448 GPT2Q8TD30 523 aa20.66■□□□□ 0.9
RUFY1-203ENST00000393448 CNPY2Q9Y2B0 182 aa20.66■□□□□ 0.9
RUFY1-203ENST00000393448 ZMYM6O95789 1325 aa20.66■□□□□ 0.9
RUFY1-203ENST00000393448 MMP10P09238 476 aa20.66■□□□□ 0.9
RUFY1-203ENST00000393448 HOXA10P31260 410 aaPredicted RBP20.66■□□□□ 0.9
RUFY1-203ENST00000393448 KLRG2A4D1S0 409 aaPredicted RBP20.65■□□□□ 0.9
RUFY1-203ENST00000393448 FBXL16Q8N461 479 aa20.65■□□□□ 0.9
RUFY1-203ENST00000393448 NSUN7Q8NE18 718 aaKnown RBP20.65■□□□□ 0.9
RUFY1-203ENST00000393448 ZNF274Q96GC6 653 aaPredicted RBP20.65■□□□□ 0.9
RUFY1-203ENST00000393448 NACAP1Q9BZK3 213 aa20.65■□□□□ 0.9
RUFY1-203ENST00000393448 KLF18A0A0U1RQI7 1052 aa20.65■□□□□ 0.9
RUFY1-203ENST00000393448 SENP2Q9HC62 589 aa20.65■□□□□ 0.9
RUFY1-203ENST00000393448 PDS5AQ29RF7 1337 aaKnown RBP20.64■□□□□ 0.9
RUFY1-203ENST00000393448 BAZ2AQ9UIF9 1905 aaKnown RBP20.64■□□□□ 0.89
RUFY1-203ENST00000393448 BBOX1O75936 387 aa20.64■□□□□ 0.89
RUFY1-203ENST00000393448 HMGB2P26583 209 aaKnown RBP20.64■□□□□ 0.89
RUFY1-203ENST00000393448 FOSBP53539 338 aa20.64■□□□□ 0.89
RUFY1-203ENST00000393448 EN1Q05925 392 aaPredicted RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms