RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 KCTD12Q96CX2 325 aaKnown RBP10.35□□□□□ -0.75
CASP4-201ENST00000393150 ABCC12Q96J65 1359 aa10.35□□□□□ -0.75
CASP4-201ENST00000393150 ADM5C9JUS6 153 aa10.34□□□□□ -0.75
CASP4-201ENST00000393150 FKTNO75072 461 aa10.34□□□□□ -0.75
CASP4-201ENST00000393150 AP1G2O75843 785 aa10.34□□□□□ -0.75
CASP4-201ENST00000393150 TBC1D8O95759 1140 aa10.34□□□□□ -0.75
CASP4-201ENST00000393150 ALDH1A1P00352 501 aa10.34□□□□□ -0.75
CASP4-201ENST00000393150 TCIRG1Q13488 830 aa10.34□□□□□ -0.75
CASP4-201ENST00000393150 GRAPQ13588 217 aa10.34□□□□□ -0.75
CASP4-201ENST00000393150 KIF4BQ2VIQ3 1234 aa10.34□□□□□ -0.75
CASP4-201ENST00000393150 NOM1Q5C9Z4 860 aaKnown RBP10.34□□□□□ -0.75
CASP4-201ENST00000393150 BLOC1S3Q6QNY0 202 aa10.34□□□□□ -0.75
CASP4-201ENST00000393150 MCM10Q7L590 875 aa10.34□□□□□ -0.75
CASP4-201ENST00000393150 GRAPLQ8TC17 118 aaPredicted RBP10.34□□□□□ -0.75
CASP4-201ENST00000393150 RIC1Q4ADV7 1423 aa10.34□□□□□ -0.75
CASP4-201ENST00000393150 GPR25O00155 361 aa10.33□□□□□ -0.76
CASP4-201ENST00000393150 PSMD14O00487 310 aa10.33□□□□□ -0.76
CASP4-201ENST00000393150 U2AF1L5P0DN76 240 aaPredicted RBP10.33□□□□□ -0.76
CASP4-201ENST00000393150 U2AF1Q01081 240 aaKnown RBP eCLIP10.33□□□□□ -0.76
CASP4-201ENST00000393150 CNGB1Q14028 1251 aaPredicted RBP10.33□□□□□ -0.76
CASP4-201ENST00000393150 SLC10A5Q5PT55 438 aa10.33□□□□□ -0.76
CASP4-201ENST00000393150 RNF19BQ6ZMZ0 732 aa10.33□□□□□ -0.76
CASP4-201ENST00000393150 POM121Q96HA1 1249 aa10.33□□□□□ -0.76
CASP4-201ENST00000393150 ZC3H12CQ9C0D7 883 aaKnown RBP10.33□□□□□ -0.76
CASP4-201ENST00000393150 NSFL1CQ9UNZ2 370 aaKnown RBP10.33□□□□□ -0.76
CASP4-201ENST00000393150 ABCC4O15439 1325 aa10.33□□□□□ -0.76
CASP4-201ENST00000393150 SNED1Q8TER0 1413 aa10.33□□□□□ -0.76
CASP4-201ENST00000393150 A6NJR5 290 aa10.33□□□□□ -0.76
CASP4-201ENST00000393150 NTSR2O95665 410 aa10.33□□□□□ -0.76
CASP4-201ENST00000393150 USP17L8P0C7I0 530 aa10.33□□□□□ -0.76
CASP4-201ENST00000393150 CTDSPL2Q05D32 466 aa10.33□□□□□ -0.76
CASP4-201ENST00000393150 ARHGEF6Q15052 776 aa10.33□□□□□ -0.76
CASP4-201ENST00000393150 RASAL3Q86YV0 1011 aa10.33□□□□□ -0.76
CASP4-201ENST00000393150 SCUBE3Q8IX30 993 aa10.33□□□□□ -0.76
CASP4-201ENST00000393150 ZNF34Q8IZ26 560 aa10.33□□□□□ -0.76
CASP4-201ENST00000393150 THAP11Q96EK4 314 aa10.33□□□□□ -0.76
CASP4-201ENST00000393150 CDCA5Q96FF9 252 aa10.33□□□□□ -0.76
CASP4-201ENST00000393150 GGA3Q9NZ52 723 aa10.33□□□□□ -0.76
CASP4-201ENST00000393150 HSP90B1P14625 803 aaKnown RBP10.32□□□□□ -0.76
CASP4-201ENST00000393150 BRICD5Q6PL45 260 aa10.32□□□□□ -0.76
CASP4-201ENST00000393150 TTLL7Q6ZT98 887 aa10.32□□□□□ -0.76
CASP4-201ENST00000393150 ARMC9Q7Z3E5 817 aa10.32□□□□□ -0.76
CASP4-201ENST00000393150 PHACTR3Q96KR7 559 aa10.32□□□□□ -0.76
CASP4-201ENST00000393150 DBNDD1Q9H9R9 158 aa10.32□□□□□ -0.76
CASP4-201ENST00000393150 TRMT112Q9UI30 125 aaKnown RBP10.32□□□□□ -0.76
CASP4-201ENST00000393150 SALL2Q9Y467 1007 aaPredicted RBP10.32□□□□□ -0.76
CASP4-201ENST00000393150 PCDHB3Q9Y5E6 796 aa10.32□□□□□ -0.76
CASP4-201ENST00000393150 ERBB4Q15303 1308 aa10.32□□□□□ -0.76
CASP4-201ENST00000393150 COL4A5P29400 1685 aa10.31□□□□□ -0.76
CASP4-201ENST00000393150 ECE2O60344 883 aa10.31□□□□□ -0.76
CASP4-201ENST00000393150 TM4SF4P48230 202 aa10.31□□□□□ -0.76
CASP4-201ENST00000393150 INHBEP58166 350 aa10.31□□□□□ -0.76
CASP4-201ENST00000393150 OTUD7BQ6GQQ9 843 aa10.31□□□□□ -0.76
CASP4-201ENST00000393150 UBN2Q6ZU65 1347 aa10.31□□□□□ -0.76
CASP4-201ENST00000393150 RETREG3Q86VR2 466 aa10.31□□□□□ -0.76
CASP4-201ENST00000393150 SH3TC1Q8TE82 1336 aa10.3□□□□□ -0.76
CASP4-201ENST00000393150 SHTN1A0MZ66 631 aa10.3□□□□□ -0.76
CASP4-201ENST00000393150 YDJCA8MPS7 323 aa10.3□□□□□ -0.76
CASP4-201ENST00000393150 HCLS1P14317 486 aaPredicted RBP10.3□□□□□ -0.76
CASP4-201ENST00000393150 SCARF1Q14162 830 aa10.3□□□□□ -0.76
CASP4-201ENST00000393150 ANGEL2Q5VTE6 544 aaKnown RBP10.3□□□□□ -0.76
CASP4-201ENST00000393150 NBPF11Q86T75 865 aa10.3□□□□□ -0.76
CASP4-201ENST00000393150 OGFOD1Q8N543 542 aa10.3□□□□□ -0.76
CASP4-201ENST00000393150 AGBL3Q8NEM8 1001 aa10.3□□□□□ -0.76
CASP4-201ENST00000393150 PRR7Q8TB68 274 aa10.3□□□□□ -0.76
CASP4-201ENST00000393150 PNNQ9H307 717 aaKnown RBP10.3□□□□□ -0.76
CASP4-201ENST00000393150 MIS18AQ9NYP9 233 aa10.3□□□□□ -0.76
CASP4-201ENST00000393150 COG6Q9Y2V7 657 aa10.3□□□□□ -0.76
CASP4-201ENST00000393150 TRIM17Q9Y577 477 aa10.3□□□□□ -0.76
CASP4-201ENST00000393150 UBE2Q2LH0YL09 131 aa10.29□□□□□ -0.76
CASP4-201ENST00000393150 DCTN1Q14203 1278 aa10.29□□□□□ -0.76
CASP4-201ENST00000393150 Q3C1V9 767 aa10.29□□□□□ -0.76
CASP4-201ENST00000393150 DLK2Q6UY11 383 aa10.29□□□□□ -0.76
CASP4-201ENST00000393150 ERO1AQ96HE7 468 aa10.29□□□□□ -0.76
CASP4-201ENST00000393150 HMX1Q9NP08 348 aaPredicted RBP10.29□□□□□ -0.76
CASP4-201ENST00000393150 ANKIB1Q9P2G1 1089 aa10.29□□□□□ -0.76
CASP4-201ENST00000393150 PITPNM2Q9BZ72 1349 aa10.28□□□□□ -0.76
CASP4-201ENST00000393150 CLSPNQ9HAW4 1339 aa10.28□□□□□ -0.76
CASP4-201ENST00000393150 VIL1P09327 827 aaKnown RBP10.28□□□□□ -0.76
CASP4-201ENST00000393150 EIF2S2P20042 333 aaKnown RBP10.28□□□□□ -0.76
CASP4-201ENST00000393150 FXR1P51114 621 aaKnown RBP eCLIP10.28□□□□□ -0.76
CASP4-201ENST00000393150 SLC17A8Q8NDX2 589 aa10.28□□□□□ -0.76
CASP4-201ENST00000393150 DLL1O00548 723 aa10.27□□□□□ -0.77
CASP4-201ENST00000393150 PER1O15534 1290 aaPredicted RBP10.27□□□□□ -0.77
CASP4-201ENST00000393150 NR1I2O75469 434 aa10.27□□□□□ -0.77
CASP4-201ENST00000393150 WDHD1O75717 1129 aaPredicted RBP10.27□□□□□ -0.77
CASP4-201ENST00000393150 LRRN4Q8WUT4 740 aa10.27□□□□□ -0.77
CASP4-201ENST00000393150 TRIM34Q9BYJ4 488 aa10.27□□□□□ -0.77
CASP4-201ENST00000393150 MYOZ2Q9NPC6 264 aa10.27□□□□□ -0.77
CASP4-201ENST00000393150 SIPA1L3O60292 1781 aaPredicted RBP10.26□□□□□ -0.77
CASP4-201ENST00000393150 MANSC4A6NHS7 340 aaPredicted RBP10.26□□□□□ -0.77
CASP4-201ENST00000393150 MMP14P50281 582 aa10.26□□□□□ -0.77
CASP4-201ENST00000393150 EIF4A1P60842 406 aaKnown RBP10.26□□□□□ -0.77
CASP4-201ENST00000393150 AIMP1Q12904 312 aaKnown RBP10.26□□□□□ -0.77
CASP4-201ENST00000393150 SLC4A8Q2Y0W8 1093 aa10.26□□□□□ -0.77
CASP4-201ENST00000393150 NYAP1Q6ZVC0 841 aa10.26□□□□□ -0.77
CASP4-201ENST00000393150 NLRP10Q86W26 655 aa10.26□□□□□ -0.77
CASP4-201ENST00000393150 SLC10A4Q96EP9 437 aa10.26□□□□□ -0.77
CASP4-201ENST00000393150 USB1Q9BQ65 265 aaKnown RBP10.26□□□□□ -0.77
CASP4-201ENST00000393150 CFHR5Q9BXR6 569 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms