RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 APPP05067 770 aa25.29■■□□□ 1.64
SPHK1-202ENST00000392496 HAND2P61296 217 aa25.29■■□□□ 1.64
SPHK1-202ENST00000392496 NECAB1Q8N987 351 aa25.29■■□□□ 1.64
SPHK1-202ENST00000392496 RAI14Q9P0K7 980 aa25.29■■□□□ 1.64
SPHK1-202ENST00000392496 WDR33Q9C0J8 1336 aaKnown RBP25.29■■□□□ 1.64
SPHK1-202ENST00000392496 ARMT1Q9H993 441 aa25.28■■□□□ 1.64
SPHK1-202ENST00000392496 CACNA1SQ13698 1873 aa25.28■■□□□ 1.64
SPHK1-202ENST00000392496 CYP7A1P22680 504 aa25.28■■□□□ 1.64
SPHK1-202ENST00000392496 FGD1P98174 961 aa25.28■■□□□ 1.64
SPHK1-202ENST00000392496 ANKRD31Q8N7Z5 1873 aa25.28■■□□□ 1.64
SPHK1-202ENST00000392496 BRIP1Q9BX63 1249 aa25.28■■□□□ 1.64
SPHK1-202ENST00000392496 GJB2P29033 226 aa25.27■■□□□ 1.64
SPHK1-202ENST00000392496 TMED8Q6PL24 325 aaPredicted RBP25.27■■□□□ 1.64
SPHK1-202ENST00000392496 TMC4Q7Z404 712 aa25.27■■□□□ 1.64
SPHK1-202ENST00000392496 NCOA7Q8NI08 942 aa25.27■■□□□ 1.64
SPHK1-202ENST00000392496 BRF1Q92994 677 aa25.27■■□□□ 1.64
SPHK1-202ENST00000392496 TRAK2O60296 914 aa25.26■■□□□ 1.63
SPHK1-202ENST00000392496 TXNRD3Q86VQ6 643 aa25.26■■□□□ 1.63
SPHK1-202ENST00000392496 IFNL3Q8IZI9 196 aa25.26■■□□□ 1.63
SPHK1-202ENST00000392496 WDR19Q8NEZ3 1342 aa25.26■■□□□ 1.63
SPHK1-202ENST00000392496 IGSF3O75054 1194 aa25.26■■□□□ 1.63
SPHK1-202ENST00000392496 PDIA4P13667 645 aaKnown RBP25.26■■□□□ 1.63
SPHK1-202ENST00000392496 ATP2B4P23634 1241 aa25.26■■□□□ 1.63
SPHK1-202ENST00000392496 MB21D2Q8IYB1 491 aaPredicted RBP25.26■■□□□ 1.63
SPHK1-202ENST00000392496 GTF3C6Q969F1 213 aa25.26■■□□□ 1.63
SPHK1-202ENST00000392496 LRRC2Q9BYS8 371 aa25.26■■□□□ 1.63
SPHK1-202ENST00000392496 GSG1L2A8MUP6 293 aa25.25■■□□□ 1.63
SPHK1-202ENST00000392496 LCORLQ8N3X6 602 aa25.25■■□□□ 1.63
SPHK1-202ENST00000392496 EPB41L4AQ9HCS5 686 aaPredicted RBP25.25■■□□□ 1.63
SPHK1-202ENST00000392496 LRRC37AA6NMS7 1700 aa25.25■■□□□ 1.63
SPHK1-202ENST00000392496 MCM5P33992 734 aa25.24■■□□□ 1.63
SPHK1-202ENST00000392496 GPSM2P81274 684 aa25.24■■□□□ 1.63
SPHK1-202ENST00000392496 SKOR2Q2VWA4 1001 aaPredicted RBP25.24■■□□□ 1.63
SPHK1-202ENST00000392496 RALYLQ86SE5 291 aaKnown RBP25.24■■□□□ 1.63
SPHK1-202ENST00000392496 NACAP1Q9BZK3 213 aa25.24■■□□□ 1.63
SPHK1-202ENST00000392496 NBPF3Q9H094 633 aa25.24■■□□□ 1.63
SPHK1-202ENST00000392496 NAPBQ9H115 298 aa25.24■■□□□ 1.63
SPHK1-202ENST00000392496 PODXL2Q9NZ53 605 aa25.24■■□□□ 1.63
SPHK1-202ENST00000392496 MAST2Q6P0Q8 1798 aa25.24■■□□□ 1.63
SPHK1-202ENST00000392496 STX6O43752 255 aa25.23■■□□□ 1.63
SPHK1-202ENST00000392496 SYT1P21579 422 aa25.23■■□□□ 1.63
SPHK1-202ENST00000392496 GSE1Q14687 1217 aa25.23■■□□□ 1.63
SPHK1-202ENST00000392496 NAA16Q6N069 864 aaPredicted RBP25.23■■□□□ 1.63
SPHK1-202ENST00000392496 PARP3Q9Y6F1 533 aa25.23■■□□□ 1.63
SPHK1-202ENST00000392496 SLC4A4Q9Y6R1 1079 aa25.23■■□□□ 1.63
SPHK1-202ENST00000392496 MAGEB6P1A0A0J9YX57 407 aa25.23■■□□□ 1.63
SPHK1-202ENST00000392496 PFKFB2O60825 505 aa25.23■■□□□ 1.63
SPHK1-202ENST00000392496 TRDNQ13061 729 aa25.23■■□□□ 1.63
SPHK1-202ENST00000392496 R3HDM1Q15032 1099 aaKnown RBP25.23■■□□□ 1.63
SPHK1-202ENST00000392496 ZNF804AQ7Z570 1209 aa25.23■■□□□ 1.63
SPHK1-202ENST00000392496 MIGA1Q8NAN2 632 aa25.23■■□□□ 1.63
SPHK1-202ENST00000392496 SLC16A10Q8TF71 515 aa25.23■■□□□ 1.63
SPHK1-202ENST00000392496 EVCP57679 992 aa25.22■■□□□ 1.63
SPHK1-202ENST00000392496 STK3Q13188 491 aa25.22■■□□□ 1.63
SPHK1-202ENST00000392496 MCTP1Q6DN14 999 aa25.22■■□□□ 1.63
SPHK1-202ENST00000392496 ADGRA1Q86SQ6 560 aa25.22■■□□□ 1.63
SPHK1-202ENST00000392496 TDRD7Q8NHU6 1098 aaKnown RBP25.22■■□□□ 1.63
SPHK1-202ENST00000392496 ZNF274Q96GC6 653 aaPredicted RBP25.22■■□□□ 1.63
SPHK1-202ENST00000392496 GGA1Q9UJY5 639 aa25.22■■□□□ 1.63
SPHK1-202ENST00000392496 SALL1Q9NSC2 1324 aa25.22■■□□□ 1.63
SPHK1-202ENST00000392496 TIAM2Q8IVF5 1701 aa25.21■■□□□ 1.63
SPHK1-202ENST00000392496 MMP10P09238 476 aa25.21■■□□□ 1.63
SPHK1-202ENST00000392496 SPTY2D1Q68D10 685 aaPredicted RBP25.21■■□□□ 1.63
SPHK1-202ENST00000392496 SLC51AQ86UW1 340 aa25.21■■□□□ 1.63
SPHK1-202ENST00000392496 TBC1D10CQ8IV04 446 aa25.21■■□□□ 1.63
SPHK1-202ENST00000392496 NSUN4Q96CB9 384 aaKnown RBP25.21■■□□□ 1.63
SPHK1-202ENST00000392496 RIOK1Q9BRS2 568 aaKnown RBP25.21■■□□□ 1.63
SPHK1-202ENST00000392496 NSFL1CQ9UNZ2 370 aaKnown RBP25.21■■□□□ 1.63
SPHK1-202ENST00000392496 CCDC88AQ3V6T2 1871 aa25.21■■□□□ 1.63
SPHK1-202ENST00000392496 QSER1Q2KHR3 1735 aa25.21■■□□□ 1.63
SPHK1-202ENST00000392496 PRC1O43663 620 aa25.21■■□□□ 1.63
SPHK1-202ENST00000392496 ZSCAN22P10073 491 aaPredicted RBP25.21■■□□□ 1.63
SPHK1-202ENST00000392496 APOBRQ0VD83 1088 aa25.21■■□□□ 1.63
SPHK1-202ENST00000392496 CHAF1AQ13111 956 aaPredicted RBP25.21■■□□□ 1.63
SPHK1-202ENST00000392496 FOXD4L5Q5VV16 416 aaPredicted RBP25.21■■□□□ 1.63
SPHK1-202ENST00000392496 WDR66Q8TBY9 1149 aa25.21■■□□□ 1.63
SPHK1-202ENST00000392496 FOXD4L4Q8WXT5 416 aaPredicted RBP25.21■■□□□ 1.63
SPHK1-202ENST00000392496 CHMP4CQ96CF2 233 aa25.21■■□□□ 1.63
SPHK1-202ENST00000392496 PRKAB2O43741 272 aa25.2■■□□□ 1.62
SPHK1-202ENST00000392496 UFL1O94874 794 aa25.2■■□□□ 1.62
SPHK1-202ENST00000392496 PDCP20941 246 aa25.2■■□□□ 1.62
SPHK1-202ENST00000392496 PDE6BP35913 854 aa25.2■■□□□ 1.62
SPHK1-202ENST00000392496 CHST3Q7LGC8 479 aa25.2■■□□□ 1.62
SPHK1-202ENST00000392496 SP8Q8IXZ3 490 aa25.2■■□□□ 1.62
SPHK1-202ENST00000392496 ZNF384Q8TF68 577 aa25.2■■□□□ 1.62
SPHK1-202ENST00000392496 LLPHQ9BRT6 129 aaKnown RBP25.2■■□□□ 1.62
SPHK1-202ENST00000392496 CHD4Q14839 1912 aa25.19■■□□□ 1.62
SPHK1-202ENST00000392496 NPR1P16066 1061 aa25.19■■□□□ 1.62
SPHK1-202ENST00000392496 LTBP1Q14766 1721 aa25.19■■□□□ 1.62
SPHK1-202ENST00000392496 KIAA1551Q9HCM1 1747 aa25.19■■□□□ 1.62
SPHK1-202ENST00000392496 PPEF1O14829 653 aaPredicted RBP25.18■■□□□ 1.62
SPHK1-202ENST00000392496 SRGNP10124 158 aa25.18■■□□□ 1.62
SPHK1-202ENST00000392496 TDO2P48775 406 aa25.18■■□□□ 1.62
SPHK1-202ENST00000392496 ANTXR2P58335 489 aa25.18■■□□□ 1.62
SPHK1-202ENST00000392496 MECOMQ03112 1051 aa25.18■■□□□ 1.62
SPHK1-202ENST00000392496 DEKP35659 375 aaKnown RBP25.18■■□□□ 1.62
SPHK1-202ENST00000392496 SCRN1Q12765 414 aa25.18■■□□□ 1.62
SPHK1-202ENST00000392496 DUOX1Q9NRD9 1551 aa25.17■■□□□ 1.62
SPHK1-202ENST00000392496 MTMR6Q9Y217 621 aa25.17■■□□□ 1.62
SPHK1-202ENST00000392496 PDIA3P30101 505 aaKnown RBP25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms