RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 AFMP43652 599 aa19.01■□□□□ 0.63
SNX9-201ENST00000392185 GTF2IP78347 998 aa19.01■□□□□ 0.63
SNX9-201ENST00000392185 USP17L12C9JPN9 530 aa19■□□□□ 0.63
SNX9-201ENST00000392185 USP17L21D6R901 530 aa19■□□□□ 0.63
SNX9-201ENST00000392185 NAPAP54920 295 aa19■□□□□ 0.63
SNX9-201ENST00000392185 MRPS27Q92552 414 aaKnown RBP19■□□□□ 0.63
SNX9-201ENST00000392185 HDAC9Q9UKV0 1011 aa19■□□□□ 0.63
SNX9-201ENST00000392185 SPATA31D1Q6ZQQ2 1576 aa19■□□□□ 0.63
SNX9-201ENST00000392185 TECPR2O15040 1411 aa19■□□□□ 0.63
SNX9-201ENST00000392185 XRCC6P12956 609 aaKnown RBP eCLIP19■□□□□ 0.633e-7■□□□□ 10.9
SNX9-201ENST00000392185 TTLL11Q8NHH1 800 aa19■□□□□ 0.63
SNX9-201ENST00000392185 KCNG4Q8TDN1 519 aa19■□□□□ 0.63
SNX9-201ENST00000392185 JDP2Q8WYK2 163 aa19■□□□□ 0.63
SNX9-201ENST00000392185 SMARCE1Q969G3 411 aa19■□□□□ 0.63
SNX9-201ENST00000392185 TCP11L1Q9NUJ3 509 aa19■□□□□ 0.63
SNX9-201ENST00000392185 CRB1P82279 1406 aa19■□□□□ 0.63
SNX9-201ENST00000392185 H0YIN7 160 aa19■□□□□ 0.63
SNX9-201ENST00000392185 GNAQP50148 359 aa19■□□□□ 0.63
SNX9-201ENST00000392185 SLFNL1Q499Z3 407 aa19■□□□□ 0.63
SNX9-201ENST00000392185 VSIG10Q8N0Z9 540 aa19■□□□□ 0.63
SNX9-201ENST00000392185 ZC3H13Q5T200 1668 aaKnown RBP18.99■□□□□ 0.63
SNX9-201ENST00000392185 LRSAM1Q6UWE0 723 aa18.99■□□□□ 0.63
SNX9-201ENST00000392185 UBA5Q9GZZ9 404 aa18.99■□□□□ 0.63
SNX9-201ENST00000392185 LSG1Q9H089 658 aaKnown RBP18.99■□□□□ 0.63
SNX9-201ENST00000392185 TMEM131LA2VDJ0 1609 aa18.99■□□□□ 0.63
SNX9-201ENST00000392185 DSCC1Q9BVC3 393 aa18.99■□□□□ 0.63
SNX9-201ENST00000392185 DIP2AQ14689 1571 aa18.99■□□□□ 0.63
SNX9-201ENST00000392185 POLD1P28340 1107 aa18.99■□□□□ 0.63
SNX9-201ENST00000392185 CUL5Q93034 780 aa18.99■□□□□ 0.63
SNX9-201ENST00000392185 DCAF8L1A6NGE4 600 aa18.98■□□□□ 0.63
SNX9-201ENST00000392185 ADCY5O95622 1261 aa18.98■□□□□ 0.63
SNX9-201ENST00000392185 TMEM266Q2M3C6 531 aa18.98■□□□□ 0.63
SNX9-201ENST00000392185 MFSD14BQ5SR56 506 aa18.98■□□□□ 0.63
SNX9-201ENST00000392185 TGFBRAP1Q8WUH2 860 aa18.98■□□□□ 0.63
SNX9-201ENST00000392185 TM6SF1Q9BZW5 370 aa18.98■□□□□ 0.63
SNX9-201ENST00000392185 TRIM75PA6NK02 468 aa18.98■□□□□ 0.63
SNX9-201ENST00000392185 CBFA2T2O43439 604 aa18.98■□□□□ 0.63
SNX9-201ENST00000392185 TCP10Q12799 353 aa18.98■□□□□ 0.63
SNX9-201ENST00000392185 KRT27Q7Z3Y8 459 aa18.98■□□□□ 0.63
SNX9-201ENST00000392185 TMEM87BQ96K49 555 aa18.98■□□□□ 0.63
SNX9-201ENST00000392185 RAB34Q9BZG1 259 aa18.98■□□□□ 0.63
SNX9-201ENST00000392185 V9GY48 417 aaPredicted RBP18.98■□□□□ 0.63
SNX9-201ENST00000392185 ZSCAN30Q86W11 494 aa18.98■□□□□ 0.63
SNX9-201ENST00000392185 NCAPD2Q15021 1401 aa18.98■□□□□ 0.63
SNX9-201ENST00000392185 FAM47AQ5JRC9 791 aa18.97■□□□□ 0.63
SNX9-201ENST00000392185 PI4K2BQ8TCG2 481 aa18.97■□□□□ 0.63
SNX9-201ENST00000392185 ZNHIT6Q9NWK9 470 aaKnown RBP18.97■□□□□ 0.63
SNX9-201ENST00000392185 TPCN1Q9ULQ1 816 aa18.97■□□□□ 0.63
SNX9-201ENST00000392185 EIF5P55010 431 aaKnown RBP18.97■□□□□ 0.63
SNX9-201ENST00000392185 TTC6Q86TZ1 520 aa18.97■□□□□ 0.63
SNX9-201ENST00000392185 ADCY9O60503 1353 aa18.97■□□□□ 0.63
SNX9-201ENST00000392185 CDC37L1Q7L3B6 337 aa18.97■□□□□ 0.63
SNX9-201ENST00000392185 MAP4K1Q92918 833 aa18.97■□□□□ 0.63
SNX9-201ENST00000392185 DNAJC25Q9H1X3 360 aa18.97■□□□□ 0.63
SNX9-201ENST00000392185 FBXO3Q9UK99 471 aa18.97■□□□□ 0.63
SNX9-201ENST00000392185 CPLX3Q8WVH0 158 aa18.96■□□□□ 0.63
SNX9-201ENST00000392185 CYP21A2P08686 494 aa18.96■□□□□ 0.63
SNX9-201ENST00000392185 HSP90AA2PQ14568 343 aaPredicted RBP18.96■□□□□ 0.63
SNX9-201ENST00000392185 STX1AQ16623 288 aa18.96■□□□□ 0.63
SNX9-201ENST00000392185 DOK7Q18PE1 504 aa18.96■□□□□ 0.63
SNX9-201ENST00000392185 ANO6Q4KMQ2 910 aa18.96■□□□□ 0.63
SNX9-201ENST00000392185 MROH1Q8NDA8 1641 aa18.96■□□□□ 0.63
SNX9-201ENST00000392185 A0A1B0GVL5 298 aa18.96■□□□□ 0.63
SNX9-201ENST00000392185 ERVV-1B6SEH8 477 aa18.96■□□□□ 0.63
SNX9-201ENST00000392185 AKNAD1Q5T1N1 836 aa18.96■□□□□ 0.63
SNX9-201ENST00000392185 CMTR1Q8N1G2 835 aaKnown RBP18.96■□□□□ 0.63
SNX9-201ENST00000392185 CLIP2Q9UDT6 1046 aa18.96■□□□□ 0.63
SNX9-201ENST00000392185 CIAO1O76071 339 aa18.96■□□□□ 0.63
SNX9-201ENST00000392185 IFNL3Q8IZI9 196 aa18.96■□□□□ 0.63
SNX9-201ENST00000392185 CALM1P0DP23 149 aa18.95■□□□□ 0.62
SNX9-201ENST00000392185 CALM2P0DP24 149 aa18.95■□□□□ 0.62
SNX9-201ENST00000392185 CALM3P0DP25 149 aa18.95■□□□□ 0.62
SNX9-201ENST00000392185 SFPQP23246 707 aaKnown RBP eCLIP18.95■□□□□ 0.621e-6■□□□□ 8.2
SNX9-201ENST00000392185 THRAP3Q9Y2W1 955 aaKnown RBP18.95■□□□□ 0.62
SNX9-201ENST00000392185 KIAA1210Q9ULL0 1709 aa18.95■□□□□ 0.62
SNX9-201ENST00000392185 AFF2P51816 1311 aa18.95■□□□□ 0.62
SNX9-201ENST00000392185 RTL9Q8NET4 1388 aa18.95■□□□□ 0.62
SNX9-201ENST00000392185 PATL2C9JE40 543 aaKnown RBP18.95■□□□□ 0.62
SNX9-201ENST00000392185 CYP19A1P11511 503 aaPredicted RBP18.95■□□□□ 0.62
SNX9-201ENST00000392185 ADD1P35611 737 aaKnown RBP18.95■□□□□ 0.62
SNX9-201ENST00000392185 CT47A1Q5JQC4 288 aaPredicted RBP18.95■□□□□ 0.62
SNX9-201ENST00000392185 LARGE2Q8N3Y3 721 aa18.95■□□□□ 0.62
SNX9-201ENST00000392185 DEPDC5O75140 1603 aa18.95■□□□□ 0.62
SNX9-201ENST00000392185 SERPINB2P05120 415 aa18.95■□□□□ 0.62
SNX9-201ENST00000392185 DEF6Q9H4E7 631 aa18.95■□□□□ 0.62
SNX9-201ENST00000392185 TNNI2P48788 182 aa18.94■□□□□ 0.62
SNX9-201ENST00000392185 CHMP4BP1P59074 171 aa18.94■□□□□ 0.62
SNX9-201ENST00000392185 CCDC178Q5BJE1 867 aa18.94■□□□□ 0.62
SNX9-201ENST00000392185 CCDC148Q8NFR7 591 aa18.94■□□□□ 0.62
SNX9-201ENST00000392185 ZSWIM6Q9HCJ5 1215 aa18.94■□□□□ 0.62
SNX9-201ENST00000392185 GPCPD1Q9NPB8 672 aa18.94■□□□□ 0.62
SNX9-201ENST00000392185 DHX58Q96C10 678 aa18.94■□□□□ 0.62
SNX9-201ENST00000392185 CEP170BQ9Y4F5 1589 aaPredicted RBP18.94■□□□□ 0.62
SNX9-201ENST00000392185 RIMS1Q86UR5 1692 aaKnown RBP18.94■□□□□ 0.62
SNX9-201ENST00000392185 GADD45BO75293 160 aaPredicted RBP18.93■□□□□ 0.62
SNX9-201ENST00000392185 TFAP4Q01664 338 aa18.93■□□□□ 0.62
SNX9-201ENST00000392185 OSBP2Q969R2 916 aa18.93■□□□□ 0.62
SNX9-201ENST00000392185 GJA3Q9Y6H8 435 aa18.93■□□□□ 0.62
SNX9-201ENST00000392185 ZNF804BA4D1E1 1349 aa18.93■□□□□ 0.62
SNX9-201ENST00000392185 MCM7P33993 719 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms