RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 ACEP12821 1306 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 SH3TC1Q8TE82 1336 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 STRCP1A6NGW2 1772 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 A0A0G2JLW4 131 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 PTPDC1A2A3K4 754 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 GOLGA6L19H0YKK7 550 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 HIP1O00291 1037 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 POLR3GO15318 223 aaPredicted RBP4□□□□□ -1.77
TRAV39-201ENST00000390466 SHOX2O60902 331 aaPredicted RBP4□□□□□ -1.77
TRAV39-201ENST00000390466 YEATS4O95619 227 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 CHGBP05060 677 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 CYP21A2P08686 494 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 ZNF18P17022 549 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 ATP2B1P20020 1258 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 BMP6P22004 513 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 SFPQP23246 707 aaKnown RBP eCLIP4□□□□□ -1.77
TRAV39-201ENST00000390466 PSMA5P28066 241 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 PBX1P40424 430 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 MAGEA9P43362 315 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 RFX5P48382 616 aaPredicted RBP4□□□□□ -1.77
TRAV39-201ENST00000390466 NDUFA8P51970 172 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 GSCP56915 257 aaPredicted RBP4□□□□□ -1.77
TRAV39-201ENST00000390466 FANCCQ00597 558 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 PPP2R3AQ06190 1150 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 GOLGA8FQ08AF8 430 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 GOLGA8DPQ0D2H9 430 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 DHX8Q14562 1220 aaKnown RBP4□□□□□ -1.77
TRAV39-201ENST00000390466 BRD3Q15059 726 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 LONRF2Q1L5Z9 754 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 HSP90AB4PQ58FF6 505 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 ADALQ6DHV7 355 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 CTR9Q6PD62 1173 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 KCNV1Q6PIU1 500 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 LRRC31Q6UY01 552 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 CERS3Q8IU89 383 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 TC2NQ8N9U0 490 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 LINC00301Q8NCQ3 95 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 MRPS27Q92552 414 aaKnown RBP4□□□□□ -1.77
TRAV39-201ENST00000390466 UBXN4Q92575 508 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 KAT2BQ92831 832 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 ZBTB9Q96C00 473 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 DHX58Q96C10 678 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 PNKPQ96T60 521 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 SEC62Q99442 399 aaKnown RBP4□□□□□ -1.77
TRAV39-201ENST00000390466 NCAPGQ9BPX3 1015 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 POLR3EQ9NVU0 708 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 KIAA1468Q9P260 1216 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 ADAM21Q9UKJ8 722 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 L1RE1Q9UN81 338 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 PPP2R2CQ9Y2T4 447 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 PLEKHG1Q9ULL1 1385 aa4□□□□□ -1.77
TRAV39-201ENST00000390466 LAMB1P07942 1786 aa3.99□□□□□ -1.77
TRAV39-201ENST00000390466 A0A0U1RQJ8 604 aa3.99□□□□□ -1.77
TRAV39-201ENST00000390466 GNAT3A8MTJ3 354 aa3.99□□□□□ -1.77
TRAV39-201ENST00000390466 EIF3CLB5ME19 914 aaKnown RBP3.99□□□□□ -1.77
TRAV39-201ENST00000390466 KIF28PB7ZC32 967 aa3.99□□□□□ -1.77
TRAV39-201ENST00000390466 NPHP1O15259 732 aa3.99□□□□□ -1.77
TRAV39-201ENST00000390466 ARHGAP6O43182 974 aa3.99□□□□□ -1.77
TRAV39-201ENST00000390466 KCNQ3O43525 872 aa3.99□□□□□ -1.77
TRAV39-201ENST00000390466 KINO60870 393 aaKnown RBP3.99□□□□□ -1.77
TRAV39-201ENST00000390466 CUTAO60888 179 aa3.99□□□□□ -1.77
TRAV39-201ENST00000390466 N4BP1O75113 896 aaKnown RBP3.99□□□□□ -1.77
TRAV39-201ENST00000390466 WDHD1O75717 1129 aaPredicted RBP3.99□□□□□ -1.77
TRAV39-201ENST00000390466 TFRCP02786 760 aaKnown RBP3.99□□□□□ -1.77
TRAV39-201ENST00000390466 TPM1P09493 284 aa3.99□□□□□ -1.77
TRAV39-201ENST00000390466 ZKSCAN1P17029 563 aaPredicted RBP3.99□□□□□ -1.77
TRAV39-201ENST00000390466 CDC27P30260 824 aa3.99□□□□□ -1.77
TRAV39-201ENST00000390466 ARHGAP25P42331 645 aa3.99□□□□□ -1.77
TRAV39-201ENST00000390466 AARSP49588 968 aaKnown RBP eCLIP3.99□□□□□ -1.77
TRAV39-201ENST00000390466 AMPD2Q01433 879 aa3.99□□□□□ -1.77
TRAV39-201ENST00000390466 PDE4BQ07343 736 aa3.99□□□□□ -1.77
TRAV39-201ENST00000390466 PTPAQ15257 358 aa3.99□□□□□ -1.77
TRAV39-201ENST00000390466 TAF7Q15545 349 aaPredicted RBP3.99□□□□□ -1.77
TRAV39-201ENST00000390466 PROSER3Q2NL68 480 aa3.99□□□□□ -1.77
TRAV39-201ENST00000390466 TEX35Q5T0J7 233 aa3.99□□□□□ -1.77
TRAV39-201ENST00000390466 HDGFL1Q5TGJ6 251 aa3.99□□□□□ -1.77
TRAV39-201ENST00000390466 CHADLQ6NUI6 762 aa3.99□□□□□ -1.77
TRAV39-201ENST00000390466 CCDC73Q6ZRK6 1079 aa3.99□□□□□ -1.77
TRAV39-201ENST00000390466 Q6ZUG5 572 aa3.99□□□□□ -1.77
TRAV39-201ENST00000390466 TOGARAM2Q6ZUX3 1019 aa3.99□□□□□ -1.77
TRAV39-201ENST00000390466 LRP10Q7Z4F1 713 aa3.99□□□□□ -1.77
TRAV39-201ENST00000390466 AACSQ86V21 672 aa3.99□□□□□ -1.77
TRAV39-201ENST00000390466 ERC1Q8IUD2 1116 aa3.99□□□□□ -1.77
TRAV39-201ENST00000390466 FOXP4Q8IVH2 680 aaPredicted RBP3.99□□□□□ -1.77
TRAV39-201ENST00000390466 C10orf67Q8IYJ2 551 aa3.99□□□□□ -1.77
TRAV39-201ENST00000390466 SPDYE1Q8NFV5 336 aaPredicted RBP3.99□□□□□ -1.77
TRAV39-201ENST00000390466 ATRIPQ8WXE1 791 aa3.99□□□□□ -1.77
TRAV39-201ENST00000390466 EDC3Q96F86 508 aaKnown RBP3.99□□□□□ -1.77
TRAV39-201ENST00000390466 CCDC34Q96HJ3 373 aa3.99□□□□□ -1.77
TRAV39-201ENST00000390466 SUCLG2Q96I99 432 aa3.99□□□□□ -1.77
TRAV39-201ENST00000390466 ZFP91Q96JP5 570 aaPredicted RBP3.99□□□□□ -1.77
TRAV39-201ENST00000390466 NEK1Q96PY6 1258 aa3.99□□□□□ -1.77
TRAV39-201ENST00000390466 EIF3CQ99613 913 aaKnown RBP3.99□□□□□ -1.77
TRAV39-201ENST00000390466 CHMP4AQ9BY43 222 aa3.99□□□□□ -1.77
TRAV39-201ENST00000390466 ARGLU1Q9NWB6 273 aaPredicted RBP3.99□□□□□ -1.77
TRAV39-201ENST00000390466 CHPF2Q9P2E5 772 aa3.99□□□□□ -1.77
TRAV39-201ENST00000390466 DBNLQ9UJU6 430 aaKnown RBP3.99□□□□□ -1.77
TRAV39-201ENST00000390466 CFAP45Q9UL16 551 aa3.99□□□□□ -1.77
TRAV39-201ENST00000390466 HPS5Q9UPZ3 1129 aa3.99□□□□□ -1.77
TRAV39-201ENST00000390466 KAT6BQ8WYB5 2073 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms