RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 APPP05067 770 aa16.03■□□□□ 0.16
SEC13-203ENST00000383801 SYT1P21579 422 aa16.03■□□□□ 0.16
SEC13-203ENST00000383801 GJB2P29033 226 aa16.03■□□□□ 0.16
SEC13-203ENST00000383801 NAPBQ9H115 298 aa16.03■□□□□ 0.16
SEC13-203ENST00000383801 MYH13Q9UKX3 1938 aa16.03■□□□□ 0.16
SEC13-203ENST00000383801 TNS1Q9HBL0 1735 aaKnown RBP16.03■□□□□ 0.16
SEC13-203ENST00000383801 LARGE1O95461 756 aa16.03■□□□□ 0.16
SEC13-203ENST00000383801 ZSCAN22P10073 491 aaPredicted RBP16.03■□□□□ 0.16
SEC13-203ENST00000383801 PCP11498 1178 aaKnown RBP16.03■□□□□ 0.16
SEC13-203ENST00000383801 ALDH1B1P30837 517 aa16.03■□□□□ 0.16
SEC13-203ENST00000383801 PDE6BP35913 854 aa16.03■□□□□ 0.16
SEC13-203ENST00000383801 HMGN5P82970 282 aaKnown RBP16.03■□□□□ 0.16
SEC13-203ENST00000383801 DDR1Q08345 913 aa16.03■□□□□ 0.16
SEC13-203ENST00000383801 PKP1Q13835 747 aa16.03■□□□□ 0.16
SEC13-203ENST00000383801 ZNF804AQ7Z570 1209 aa16.03■□□□□ 0.16
SEC13-203ENST00000383801 COL23A1Q86Y22 540 aaPredicted RBP16.03■□□□□ 0.16
SEC13-203ENST00000383801 SP8Q8IXZ3 490 aa16.03■□□□□ 0.16
SEC13-203ENST00000383801 MB21D2Q8IYB1 491 aaPredicted RBP16.03■□□□□ 0.16
SEC13-203ENST00000383801 RAI14Q9P0K7 980 aa16.03■□□□□ 0.16
SEC13-203ENST00000383801 ABCF2Q9UG63 623 aa16.03■□□□□ 0.16
SEC13-203ENST00000383801 ISY1Q9ULR0 285 aaKnown RBP16.03■□□□□ 0.16
SEC13-203ENST00000383801 DUOX1Q9NRD9 1551 aa16.02■□□□□ 0.16
SEC13-203ENST00000383801 GSG1L2A8MUP6 293 aa16.02■□□□□ 0.15
SEC13-203ENST00000383801 DHX16O60231 1041 aaKnown RBP16.02■□□□□ 0.15
SEC13-203ENST00000383801 MBD4O95243 580 aa16.02■□□□□ 0.15
SEC13-203ENST00000383801 CYP7A1P22680 504 aa16.02■□□□□ 0.15
SEC13-203ENST00000383801 TTLL5Q6EMB2 1281 aa16.02■□□□□ 0.15
SEC13-203ENST00000383801 NAA16Q6N069 864 aaPredicted RBP16.02■□□□□ 0.15
SEC13-203ENST00000383801 TDRD7Q8NHU6 1098 aaKnown RBP16.02■□□□□ 0.15
SEC13-203ENST00000383801 BRF1Q92994 677 aa16.02■□□□□ 0.15
SEC13-203ENST00000383801 TMEM87BQ96K49 555 aa16.02■□□□□ 0.15
SEC13-203ENST00000383801 KRT23Q9C075 422 aa16.02■□□□□ 0.15
SEC13-203ENST00000383801 RNF41Q9H4P4 317 aaPredicted RBP16.02■□□□□ 0.15
SEC13-203ENST00000383801 MAGEB6P1A0A0J9YX57 407 aa16.01■□□□□ 0.15
SEC13-203ENST00000383801 ZNF827Q17R98 1081 aa16.01■□□□□ 0.15
SEC13-203ENST00000383801 KLHL40Q2TBA0 621 aa16.01■□□□□ 0.15
SEC13-203ENST00000383801 CCDC24Q8N4L8 307 aa16.01■□□□□ 0.15
SEC13-203ENST00000383801 ANAPC4Q9UJX5 808 aa16.01■□□□□ 0.15
SEC13-203ENST00000383801 CCDC88AQ3V6T2 1871 aa16.01■□□□□ 0.15
SEC13-203ENST00000383801 KIAA1551Q9HCM1 1747 aa16■□□□□ 0.15
SEC13-203ENST00000383801 NPR1P16066 1061 aa16■□□□□ 0.15
SEC13-203ENST00000383801 ST3GAL1Q11201 340 aa16■□□□□ 0.15
SEC13-203ENST00000383801 CSPP1Q1MSJ5 1256 aa16■□□□□ 0.15
SEC13-203ENST00000383801 LARP1BQ659C4 914 aaKnown RBP16■□□□□ 0.15
SEC13-203ENST00000383801 SMARCC2Q8TAQ2 1214 aa16■□□□□ 0.15
SEC13-203ENST00000383801 FBXO41Q8TF61 875 aa16■□□□□ 0.15
SEC13-203ENST00000383801 NSUN4Q96CB9 384 aaKnown RBP16■□□□□ 0.15
SEC13-203ENST00000383801 GGA1Q9UJY5 639 aa16■□□□□ 0.15
SEC13-203ENST00000383801 PARP3Q9Y6F1 533 aa16■□□□□ 0.15
SEC13-203ENST00000383801 SLC4A4Q9Y6R1 1079 aa16■□□□□ 0.15
SEC13-203ENST00000383801 CACNA1SQ13698 1873 aa16■□□□□ 0.15
SEC13-203ENST00000383801 QSER1Q2KHR3 1735 aa16■□□□□ 0.15
SEC13-203ENST00000383801 PRC1O43663 620 aa15.99■□□□□ 0.15
SEC13-203ENST00000383801 IL1R1P14778 569 aa15.99■□□□□ 0.15
SEC13-203ENST00000383801 GSTO1P78417 241 aa15.99■□□□□ 0.15
SEC13-203ENST00000383801 MCTP1Q6DN14 999 aa15.99■□□□□ 0.15
SEC13-203ENST00000383801 KLHL34Q8N239 644 aa15.99■□□□□ 0.15
SEC13-203ENST00000383801 TMTC2Q8N394 836 aa15.99■□□□□ 0.15
SEC13-203ENST00000383801 STAG1Q8WVM7 1258 aa15.99■□□□□ 0.15
SEC13-203ENST00000383801 TCEANC2Q96MN5 208 aa15.99■□□□□ 0.15
SEC13-203ENST00000383801 RIOK1Q9BRS2 568 aaKnown RBP15.99■□□□□ 0.15
SEC13-203ENST00000383801 LARP6Q9BRS8 491 aaKnown RBP15.99■□□□□ 0.15
SEC13-203ENST00000383801 ARMT1Q9H993 441 aa15.99■□□□□ 0.15
SEC13-203ENST00000383801 RGS17Q9UGC6 210 aaPredicted RBP15.99■□□□□ 0.15
SEC13-203ENST00000383801 MAST2Q6P0Q8 1798 aa15.99■□□□□ 0.15
SEC13-203ENST00000383801 LRRC37AA6NMS7 1700 aa15.99■□□□□ 0.15
SEC13-203ENST00000383801 TIAM2Q8IVF5 1701 aa15.99■□□□□ 0.15
SEC13-203ENST00000383801 F13A1P00488 732 aa15.98■□□□□ 0.15
SEC13-203ENST00000383801 LDHCP07864 332 aa15.98■□□□□ 0.15
SEC13-203ENST00000383801 PDIA3P30101 505 aaKnown RBP15.98■□□□□ 0.15
SEC13-203ENST00000383801 AKNAD1Q5T1N1 836 aa15.98■□□□□ 0.15
SEC13-203ENST00000383801 NECAB1Q8N987 351 aa15.98■□□□□ 0.15
SEC13-203ENST00000383801 TMEM87AQ8NBN3 555 aa15.98■□□□□ 0.15
SEC13-203ENST00000383801 ATP8A2Q9NTI2 1148 aa15.98■□□□□ 0.15
SEC13-203ENST00000383801 LMBRD1Q9NUN5 540 aa15.98■□□□□ 0.15
SEC13-203ENST00000383801 COL1A1P02452 1464 aaPredicted RBP15.98■□□□□ 0.15
SEC13-203ENST00000383801 MBD3O95983 291 aa15.97■□□□□ 0.15
SEC13-203ENST00000383801 SRGNP10124 158 aa15.97■□□□□ 0.15
SEC13-203ENST00000383801 DEKP35659 375 aaKnown RBP15.97■□□□□ 0.15
SEC13-203ENST00000383801 LIFRP42702 1097 aa15.97■□□□□ 0.15
SEC13-203ENST00000383801 TDO2P48775 406 aa15.97■□□□□ 0.15
SEC13-203ENST00000383801 HAND2P61296 217 aa15.97■□□□□ 0.15
SEC13-203ENST00000383801 COL9A3Q14050 684 aaPredicted RBP15.97■□□□□ 0.15
SEC13-203ENST00000383801 MFSD6Q6ZSS7 791 aa15.97■□□□□ 0.15
SEC13-203ENST00000383801 LCORLQ8N3X6 602 aa15.97■□□□□ 0.15
SEC13-203ENST00000383801 TBC1D22AQ8WUA7 517 aa15.97■□□□□ 0.15
SEC13-203ENST00000383801 TMX4Q9H1E5 349 aaPredicted RBP15.97■□□□□ 0.15
SEC13-203ENST00000383801 ANGEL1Q9UNK9 670 aaKnown RBP15.97■□□□□ 0.15
SEC13-203ENST00000383801 NSFL1CQ9UNZ2 370 aaKnown RBP15.97■□□□□ 0.15
SEC13-203ENST00000383801 MTMR6Q9Y217 621 aa15.97■□□□□ 0.15
SEC13-203ENST00000383801 ATP6V0A2Q9Y487 856 aa15.97■□□□□ 0.15
SEC13-203ENST00000383801 RCAN1P53805 252 aa15.97■□□□□ 0.15
SEC13-203ENST00000383801 GPSM2P81274 684 aa15.97■□□□□ 0.15
SEC13-203ENST00000383801 SCRN1Q12765 414 aa15.97■□□□□ 0.15
SEC13-203ENST00000383801 SGMS1Q86VZ5 419 aa15.97■□□□□ 0.15
SEC13-203ENST00000383801 MASTLQ96GX5 879 aa15.97■□□□□ 0.15
SEC13-203ENST00000383801 CAMKK2Q96RR4 588 aa15.97■□□□□ 0.15
SEC13-203ENST00000383801 EPB41L4AQ9HCS5 686 aaPredicted RBP15.97■□□□□ 0.15
SEC13-203ENST00000383801 IQSEC3Q9UPP2 1182 aaPredicted RBP15.97■□□□□ 0.15
SEC13-203ENST00000383801 SUGT1Q9Y2Z0 365 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms