RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 IFNL1Q8IU54 200 aa33.12■■■□□ 2.89
NPHP3-202ENST00000383282 USP2O75604 605 aaPredicted RBP33.11■■■□□ 2.89
NPHP3-202ENST00000383282 TNNI2P48788 182 aa33.11■■■□□ 2.89
NPHP3-202ENST00000383282 VGLL2Q8N8G2 317 aa33.11■■■□□ 2.89
NPHP3-202ENST00000383282 IFIT1P09914 478 aaKnown RBP33.09■■■□□ 2.89
NPHP3-202ENST00000383282 KLHDC4Q8TBB5 520 aa33.09■■■□□ 2.89
NPHP3-202ENST00000383282 SMC4Q9NTJ3 1288 aa33.09■■■□□ 2.89
NPHP3-202ENST00000383282 TCP10L2B9ZVM9 353 aa33.08■■■□□ 2.89
NPHP3-202ENST00000383282 HDLBPQ00341 1268 aaKnown RBP33.08■■■□□ 2.89
NPHP3-202ENST00000383282 PUM3Q15397 648 aaKnown RBP33.08■■■□□ 2.89
NPHP3-202ENST00000383282 OTUD7BQ6GQQ9 843 aa33.08■■■□□ 2.89
NPHP3-202ENST00000383282 ARAP2Q8WZ64 1704 aa33.08■■■□□ 2.89
NPHP3-202ENST00000383282 FBXO46Q6PJ61 603 aaPredicted RBP33.07■■■□□ 2.88
NPHP3-202ENST00000383282 R3HDMLQ9H3Y0 253 aa33.07■■■□□ 2.88
NPHP3-202ENST00000383282 BCAMP50895 628 aa33.06■■■□□ 2.88
NPHP3-202ENST00000383282 TEKT1Q969V4 418 aa33.06■■■□□ 2.88
NPHP3-202ENST00000383282 KIF16BQ96L93 1317 aa33.05■■■□□ 2.88
NPHP3-202ENST00000383282 MAST3O60307 1309 aa33.04■■■□□ 2.88
NPHP3-202ENST00000383282 IGF2BP3O00425 579 aaKnown RBP eCLIP33.04■■■□□ 2.88
NPHP3-202ENST00000383282 GRIK5Q16478 980 aa33.04■■■□□ 2.88
NPHP3-202ENST00000383282 CDCA7LQ96GN5 454 aa33.04■■■□□ 2.88
NPHP3-202ENST00000383282 TEPSINQ96N21 525 aa33.04■■■□□ 2.88
NPHP3-202ENST00000383282 TMEM39BQ9GZU3 492 aa33.04■■■□□ 2.88
NPHP3-202ENST00000383282 TMOD2Q9NZR1 351 aa33.04■■■□□ 2.88
NPHP3-202ENST00000383282 SUGT1Q9Y2Z0 365 aa33.04■■■□□ 2.88
NPHP3-202ENST00000383282 EYA2O00167 538 aa33.03■■■□□ 2.88
NPHP3-202ENST00000383282 ELP3Q9H9T3 547 aa33.03■■■□□ 2.88
NPHP3-202ENST00000383282 CT47B1P0C2W7 299 aaPredicted RBP33.02■■■□□ 2.88
NPHP3-202ENST00000383282 SLC5A1P13866 664 aa33.02■■■□□ 2.88
NPHP3-202ENST00000383282 FGFR2P21802 821 aa33.02■■■□□ 2.88
NPHP3-202ENST00000383282 GJA5P36382 358 aa33.02■■■□□ 2.88
NPHP3-202ENST00000383282 MRIQ9BWK5 157 aa33.02■■■□□ 2.88
NPHP3-202ENST00000383282 RFX5P48382 616 aaPredicted RBP33.01■■■□□ 2.87
NPHP3-202ENST00000383282 LPIN2Q92539 896 aa33.01■■■□□ 2.87
NPHP3-202ENST00000383282 OPTNQ96CV9 577 aa33.01■■■□□ 2.87
NPHP3-202ENST00000383282 UBTFL1P0CB47 393 aaPredicted RBP33■■■□□ 2.87
NPHP3-202ENST00000383282 ZDHHC15Q96MV8 337 aa33■■■□□ 2.87
NPHP3-202ENST00000383282 MAP3K9P80192 1104 aa32.99■■■□□ 2.87
NPHP3-202ENST00000383282 CDAN1Q8IWY9 1227 aa32.99■■■□□ 2.87
NPHP3-202ENST00000383282 CSADQ9Y600 493 aa32.99■■■□□ 2.87
NPHP3-202ENST00000383282 TESPA1A2RU30 521 aaPredicted RBP32.98■■■□□ 2.87
NPHP3-202ENST00000383282 FBXO3Q9UK99 471 aa32.98■■■□□ 2.87
NPHP3-202ENST00000383282 HDAC5Q9UQL6 1122 aa32.98■■■□□ 2.87
NPHP3-202ENST00000383282 TRIM17Q9Y577 477 aa32.98■■■□□ 2.87
NPHP3-202ENST00000383282 PPP1R3FQ6ZSY5 799 aaPredicted RBP32.97■■■□□ 2.87
NPHP3-202ENST00000383282 TRMT2AQ8IZ69 625 aaKnown RBP32.97■■■□□ 2.87
NPHP3-202ENST00000383282 DDX55Q8NHQ9 600 aaKnown RBP eCLIP32.97■■■□□ 2.87
NPHP3-202ENST00000383282 WDR66Q8TBY9 1149 aa32.97■■■□□ 2.87
NPHP3-202ENST00000383282 ERO1AQ96HE7 468 aa32.97■■■□□ 2.87
NPHP3-202ENST00000383282 CACNB3P54284 484 aa32.96■■■□□ 2.87
NPHP3-202ENST00000383282 CRHR2Q13324 411 aa32.96■■■□□ 2.87
NPHP3-202ENST00000383282 VGLL4Q14135 290 aa32.96■■■□□ 2.87
NPHP3-202ENST00000383282 HOOK2Q96ED9 719 aa32.96■■■□□ 2.87
NPHP3-202ENST00000383282 API5Q9BZZ5 524 aaKnown RBP32.96■■■□□ 2.87
NPHP3-202ENST00000383282 HHIPL2Q6UWX4 724 aa32.95■■■□□ 2.87
NPHP3-202ENST00000383282 FAM83AQ86UY5 434 aa32.95■■■□□ 2.87
NPHP3-202ENST00000383282 NOB1Q9ULX3 412 aaKnown RBP32.95■■■□□ 2.87
NPHP3-202ENST00000383282 LAMB1P07942 1786 aa32.95■■■□□ 2.87
NPHP3-202ENST00000383282 GTF2A2P52657 109 aa32.94■■■□□ 2.86
NPHP3-202ENST00000383282 FKBP1CQ5VVH2 108 aa32.94■■■□□ 2.86
NPHP3-202ENST00000383282 PTPN18Q99952 460 aa32.94■■■□□ 2.86
NPHP3-202ENST00000383282 SIL1Q9H173 461 aa32.94■■■□□ 2.86
NPHP3-202ENST00000383282 CEP126Q9P2H0 1117 aa32.94■■■□□ 2.86
NPHP3-202ENST00000383282 CIAO1O76071 339 aa32.93■■■□□ 2.86
NPHP3-202ENST00000383282 APOBEC3HQ6NTF7 200 aaKnown RBP32.93■■■□□ 2.86
NPHP3-202ENST00000383282 OTOP1Q7RTM1 612 aa32.93■■■□□ 2.86
NPHP3-202ENST00000383282 ATG9AQ7Z3C6 839 aa32.93■■■□□ 2.86
NPHP3-202ENST00000383282 MS4A4AQ96JQ5 239 aa32.93■■■□□ 2.86
NPHP3-202ENST00000383282 OTOFQ9HC10 1997 aa32.92■■■□□ 2.86
NPHP3-202ENST00000383282 GNL3LQ9NVN8 582 aaKnown RBP32.92■■■□□ 2.86
NPHP3-202ENST00000383282 ATP2B3Q16720 1220 aa32.91■■■□□ 2.86
NPHP3-202ENST00000383282 CNKSR2Q8WXI2 1034 aa32.91■■■□□ 2.86
NPHP3-202ENST00000383282 OTUD5Q96G74 571 aa32.91■■■□□ 2.86
NPHP3-202ENST00000383282 CCL15-CCL14A0A0B4J2E2 113 aa32.9■■■□□ 2.86
NPHP3-202ENST00000383282 SP3Q02447 781 aa32.9■■■□□ 2.86
NPHP3-202ENST00000383282 CCL15Q16663 113 aa32.9■■■□□ 2.86
NPHP3-202ENST00000383282 DCAF15Q66K64 600 aa32.89■■■□□ 2.86
NPHP3-202ENST00000383282 CD99L2Q8TCZ2 262 aa32.89■■■□□ 2.86
NPHP3-202ENST00000383282 BRI3BPQ8WY22 251 aa32.89■■■□□ 2.86
NPHP3-202ENST00000383282 WRNIP1Q96S55 665 aa32.89■■■□□ 2.86
NPHP3-202ENST00000383282 RPAP1Q9BWH6 1393 aaPredicted RBP32.88■■■□□ 2.85
NPHP3-202ENST00000383282 ZFYVE28Q9HCC9 887 aa32.88■■■□□ 2.85
NPHP3-202ENST00000383282 LRRFIP2Q9Y608 721 aaKnown RBP32.88■■■□□ 2.85
NPHP3-202ENST00000383282 SPDYE5A6NIY4 337 aa32.87■■■□□ 2.85
NPHP3-202ENST00000383282 IL15P40933 162 aaPredicted RBP32.87■■■□□ 2.85
NPHP3-202ENST00000383282 TAF1CQ15572 869 aaPredicted RBP32.87■■■□□ 2.85
NPHP3-202ENST00000383282 ERO1BQ86YB8 467 aa32.87■■■□□ 2.85
NPHP3-202ENST00000383282 EFCC1Q9HA90 598 aa32.87■■■□□ 2.85
NPHP3-202ENST00000383282 WDHD1O75717 1129 aaPredicted RBP32.86■■■□□ 2.85
NPHP3-202ENST00000383282 CCER2I3L3R5 266 aa32.85■■■□□ 2.85
NPHP3-202ENST00000383282 INTS3Q68E01 1043 aaKnown RBP32.85■■■□□ 2.85
NPHP3-202ENST00000383282 DENND2AQ9ULE3 1009 aa32.85■■■□□ 2.85
NPHP3-202ENST00000383282 PTPN22Q9Y2R2 807 aa32.85■■■□□ 2.85
NPHP3-202ENST00000383282 SNCAIPQ9Y6H5 919 aa32.85■■■□□ 2.85
NPHP3-202ENST00000383282 TNRC18O15417 2968 aaPredicted RBP32.85■■■□□ 2.85
NPHP3-202ENST00000383282 SEMA3EO15041 775 aa32.84■■■□□ 2.85
NPHP3-202ENST00000383282 SLC34A2O95436 690 aa32.84■■■□□ 2.85
NPHP3-202ENST00000383282 LDHBP07195 334 aaKnown RBP32.84■■■□□ 2.85
NPHP3-202ENST00000383282 ARHGEF6Q15052 776 aa32.84■■■□□ 2.85
NPHP3-202ENST00000383282 ZNF341Q9BYN7 854 aa32.84■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms