RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 RNF113AO15541 343 aaKnown RBP10.44□□□□□ -0.74
GPNMB-202ENST00000381990 CHGBP05060 677 aa10.44□□□□□ -0.74
GPNMB-202ENST00000381990 FKBP4Q02790 459 aaKnown RBP eCLIP10.44□□□□□ -0.74
GPNMB-202ENST00000381990 LRMPQ12912 555 aa10.44□□□□□ -0.74
GPNMB-202ENST00000381990 CEP135Q66GS9 1140 aa10.44□□□□□ -0.74
GPNMB-202ENST00000381990 LEO1Q8WVC0 666 aaPredicted RBP10.44□□□□□ -0.74
GPNMB-202ENST00000381990 KCND1Q9NSA2 647 aa10.44□□□□□ -0.74
GPNMB-202ENST00000381990 SBF2Q86WG5 1849 aa10.44□□□□□ -0.74
GPNMB-202ENST00000381990 KIF2AO00139 706 aaPredicted RBP10.43□□□□□ -0.74
GPNMB-202ENST00000381990 CTAGE5O15320 804 aa10.43□□□□□ -0.74
GPNMB-202ENST00000381990 ZFYP08048 801 aaPredicted RBP10.43□□□□□ -0.74
GPNMB-202ENST00000381990 KRT32Q14532 448 aa10.43□□□□□ -0.74
GPNMB-202ENST00000381990 SLFNL1Q499Z3 407 aa10.43□□□□□ -0.74
GPNMB-202ENST00000381990 CCDC129Q6ZRS4 1044 aa10.43□□□□□ -0.74
GPNMB-202ENST00000381990 ZNF771Q7L3S4 317 aaPredicted RBP10.43□□□□□ -0.74
GPNMB-202ENST00000381990 CKAP2LQ8IYA6 745 aa10.43□□□□□ -0.74
GPNMB-202ENST00000381990 KIF18AQ8NI77 898 aa10.43□□□□□ -0.74
GPNMB-202ENST00000381990 SCARF1Q14162 830 aa10.43□□□□□ -0.74
GPNMB-202ENST00000381990 PUM3Q15397 648 aaKnown RBP10.43□□□□□ -0.74
GPNMB-202ENST00000381990 FAM182BQ5T319 152 aa10.43□□□□□ -0.74
GPNMB-202ENST00000381990 KRT222Q8N1A0 295 aa10.43□□□□□ -0.74
GPNMB-202ENST00000381990 ZNF397Q8NF99 534 aaPredicted RBP10.43□□□□□ -0.74
GPNMB-202ENST00000381990 MPHOSPH8Q99549 860 aa10.43□□□□□ -0.74
GPNMB-202ENST00000381990 CCNL1Q9UK58 526 aaPredicted RBP10.43□□□□□ -0.74
GPNMB-202ENST00000381990 LY75O60449 1722 aa10.43□□□□□ -0.74
GPNMB-202ENST00000381990 AKAP11Q9UKA4 1901 aa10.43□□□□□ -0.74
GPNMB-202ENST00000381990 ARAP2Q8WZ64 1704 aa10.43□□□□□ -0.74
GPNMB-202ENST00000381990 GOLGA6L19H0YKK7 550 aa10.43□□□□□ -0.74
GPNMB-202ENST00000381990 FGFR2P21802 821 aa10.43□□□□□ -0.74
GPNMB-202ENST00000381990 BLOC1S2Q6QNY1 142 aa10.43□□□□□ -0.74
GPNMB-202ENST00000381990 LRRC8AQ8IWT6 810 aa10.43□□□□□ -0.74
GPNMB-202ENST00000381990 NECAB1Q8N987 351 aa10.43□□□□□ -0.74
GPNMB-202ENST00000381990 CACTINQ8WUQ7 758 aaKnown RBP10.43□□□□□ -0.74
GPNMB-202ENST00000381990 LPIN2Q92539 896 aa10.43□□□□□ -0.74
GPNMB-202ENST00000381990 DSCC1Q9BVC3 393 aa10.43□□□□□ -0.74
GPNMB-202ENST00000381990 ZSCAN16Q9H4T2 348 aaPredicted RBP10.43□□□□□ -0.74
GPNMB-202ENST00000381990 SEC31BQ9NQW1 1179 aa10.43□□□□□ -0.74
GPNMB-202ENST00000381990 NARFQ9UHQ1 456 aa10.43□□□□□ -0.74
GPNMB-202ENST00000381990 CFAP45Q9UL16 551 aa10.43□□□□□ -0.74
GPNMB-202ENST00000381990 CCDC66A2RUB6 948 aa10.42□□□□□ -0.74
GPNMB-202ENST00000381990 ZAP70P43403 619 aa10.42□□□□□ -0.74
GPNMB-202ENST00000381990 NYAP1Q6ZVC0 841 aa10.42□□□□□ -0.74
GPNMB-202ENST00000381990 NRBP1Q9UHY1 535 aa10.42□□□□□ -0.74
GPNMB-202ENST00000381990 MYH7P12883 1935 aa10.42□□□□□ -0.74
GPNMB-202ENST00000381990 MAST3O60307 1309 aa10.42□□□□□ -0.74
GPNMB-202ENST00000381990 TAF1LQ8IZX4 1826 aa10.42□□□□□ -0.74
GPNMB-202ENST00000381990 UQCRFS1P1P0C7P4 283 aa10.42□□□□□ -0.74
GPNMB-202ENST00000381990 RPS6KB1P23443 525 aa10.42□□□□□ -0.74
GPNMB-202ENST00000381990 IGHMBP2P38935 993 aaKnown RBP10.42□□□□□ -0.74
GPNMB-202ENST00000381990 FERMT3Q86UX7 667 aa10.42□□□□□ -0.74
GPNMB-202ENST00000381990 SEPT12Q8IYM1 358 aa10.42□□□□□ -0.74
GPNMB-202ENST00000381990 BICD2Q8TD16 824 aa10.42□□□□□ -0.74
GPNMB-202ENST00000381990 ERO1AQ96HE7 468 aa10.42□□□□□ -0.74
GPNMB-202ENST00000381990 GNPATO15228 680 aa10.41□□□□□ -0.74
GPNMB-202ENST00000381990 NR1I2O75469 434 aa10.41□□□□□ -0.74
GPNMB-202ENST00000381990 SLC5A1P13866 664 aa10.41□□□□□ -0.74
GPNMB-202ENST00000381990 MCAMP43121 646 aa10.41□□□□□ -0.74
GPNMB-202ENST00000381990 DHX8Q14562 1220 aaKnown RBP10.41□□□□□ -0.74
GPNMB-202ENST00000381990 PTPN14Q15678 1187 aa10.41□□□□□ -0.74
GPNMB-202ENST00000381990 RTCBQ9Y3I0 505 aaKnown RBP10.41□□□□□ -0.74
GPNMB-202ENST00000381990 TAF6LQ9Y6J9 622 aa10.41□□□□□ -0.74
GPNMB-202ENST00000381990 ARID4AP29374 1257 aaPredicted RBP10.41□□□□□ -0.74
GPNMB-202ENST00000381990 TTF1Q15361 905 aaPredicted RBP10.41□□□□□ -0.74
GPNMB-202ENST00000381990 SF3B3Q15393 1217 aaKnown RBP10.41□□□□□ -0.74
GPNMB-202ENST00000381990 ERFEQ4G0M1 354 aa10.41□□□□□ -0.74
GPNMB-202ENST00000381990 CCDC102BQ68D86 513 aa10.41□□□□□ -0.74
GPNMB-202ENST00000381990 HELBQ8NG08 1087 aaPredicted RBP10.41□□□□□ -0.74
GPNMB-202ENST00000381990 CDC5LQ99459 802 aaKnown RBP10.41□□□□□ -0.74
GPNMB-202ENST00000381990 DNAJC25Q9H1X3 360 aa10.41□□□□□ -0.74
GPNMB-202ENST00000381990 TUBB4AP04350 444 aa10.4□□□□□ -0.74
GPNMB-202ENST00000381990 CYP21A2P08686 494 aa10.4□□□□□ -0.74
GPNMB-202ENST00000381990 SLFN14P0C7P3 912 aa10.4□□□□□ -0.74
GPNMB-202ENST00000381990 PHKA1P46020 1223 aa10.4□□□□□ -0.74
GPNMB-202ENST00000381990 IQCB1Q15051 598 aa10.4□□□□□ -0.74
GPNMB-202ENST00000381990 STX1AQ16623 288 aa10.4□□□□□ -0.74
GPNMB-202ENST00000381990 SLC10A5Q5PT55 438 aa10.4□□□□□ -0.74
GPNMB-202ENST00000381990 TBC1D9BQ66K14 1250 aa10.4□□□□□ -0.74
GPNMB-202ENST00000381990 PI16Q6UXB8 463 aa10.4□□□□□ -0.74
GPNMB-202ENST00000381990 APPBP2Q92624 585 aa10.4□□□□□ -0.74
GPNMB-202ENST00000381990 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.4□□□□□ -0.74
GPNMB-202ENST00000381990 FAM53CQ9NYF3 392 aa10.4□□□□□ -0.74
GPNMB-202ENST00000381990 ZPR1O75312 459 aa10.4□□□□□ -0.74
GPNMB-202ENST00000381990 GSDMDP57764 484 aa10.4□□□□□ -0.74
GPNMB-202ENST00000381990 TERF2Q15554 542 aa10.4□□□□□ -0.74
GPNMB-202ENST00000381990 OSBP2Q969R2 916 aa10.4□□□□□ -0.74
GPNMB-202ENST00000381990 NEK1Q96PY6 1258 aa10.4□□□□□ -0.74
GPNMB-202ENST00000381990 NYXQ9GZU5 481 aa10.4□□□□□ -0.74
GPNMB-202ENST00000381990 M0R2C6 588 aa10.39□□□□□ -0.75
GPNMB-202ENST00000381990 HSPD1P10809 573 aaKnown RBP10.39□□□□□ -0.75
GPNMB-202ENST00000381990 WASHC4Q2M389 1173 aa10.39□□□□□ -0.75
GPNMB-202ENST00000381990 CCDC144BQ3MJ40 725 aa10.39□□□□□ -0.75
GPNMB-202ENST00000381990 ATL3Q6DD88 541 aa10.39□□□□□ -0.75
GPNMB-202ENST00000381990 CCDC144CPQ8IYA2 1237 aa10.39□□□□□ -0.75
GPNMB-202ENST00000381990 PGBD1Q96JS3 809 aa10.39□□□□□ -0.75
GPNMB-202ENST00000381990 BCL11BQ9C0K0 894 aaPredicted RBP10.39□□□□□ -0.75
GPNMB-202ENST00000381990 SRP68Q9UHB9 627 aaKnown RBP10.39□□□□□ -0.75
GPNMB-202ENST00000381990 COL24A1Q17RW2 1714 aa10.39□□□□□ -0.75
GPNMB-202ENST00000381990 SKILP12757 684 aa10.39□□□□□ -0.75
GPNMB-202ENST00000381990 GTF2E1P29083 439 aaPredicted RBP10.39□□□□□ -0.75
GPNMB-202ENST00000381990 FAM173BQ6P4H8 233 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms