RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 FBXO9Q9UK97 447 aaPredicted RBP6.49□□□□□ -1.37
RFC1-202ENST00000381897 TBC1D2BQ9UPU7 963 aa6.49□□□□□ -1.37
RFC1-202ENST00000381897 PCDHB9Q9Y5E1 797 aa6.49□□□□□ -1.37
RFC1-202ENST00000381897 PIK3R4Q99570 1358 aa6.48□□□□□ -1.37
RFC1-202ENST00000381897 MNAT1P51948 309 aa6.48□□□□□ -1.37
RFC1-202ENST00000381897 EVCP57679 992 aa6.48□□□□□ -1.37
RFC1-202ENST00000381897 RAD51AP2Q09MP3 1159 aa6.48□□□□□ -1.37
RFC1-202ENST00000381897 SMC1AQ14683 1233 aaKnown RBP6.48□□□□□ -1.37
RFC1-202ENST00000381897 FILIP1LQ4L180 1135 aa6.48□□□□□ -1.37
RFC1-202ENST00000381897 FBXO38Q6PIJ6 1188 aa6.48□□□□□ -1.37
RFC1-202ENST00000381897 CFAP65Q6ZU64 1925 aaKnown RBP6.48□□□□□ -1.37
RFC1-202ENST00000381897 IQGAP1P46940 1657 aa6.48□□□□□ -1.37
RFC1-202ENST00000381897 MYO5CQ9NQX4 1742 aa6.48□□□□□ -1.37
RFC1-202ENST00000381897 MYO1BO43795 1136 aa6.48□□□□□ -1.37
RFC1-202ENST00000381897 PRMT3O60678 531 aa6.48□□□□□ -1.37
RFC1-202ENST00000381897 DDAH1O94760 285 aa6.48□□□□□ -1.37
RFC1-202ENST00000381897 PIP4K2AP48426 406 aaPredicted RBP6.48□□□□□ -1.37
RFC1-202ENST00000381897 PRPF40BQ6NWY9 871 aaKnown RBP6.48□□□□□ -1.37
RFC1-202ENST00000381897 CNNM4Q6P4Q7 775 aa6.48□□□□□ -1.37
RFC1-202ENST00000381897 PPFIBP1Q86W92 1011 aa6.48□□□□□ -1.37
RFC1-202ENST00000381897 POTEDQ86YR6 584 aa6.48□□□□□ -1.37
RFC1-202ENST00000381897 CCDC148Q8NFR7 591 aa6.48□□□□□ -1.37
RFC1-202ENST00000381897 SMARCC1Q92922 1105 aaPredicted RBP6.48□□□□□ -1.37
RFC1-202ENST00000381897 GPR101Q96P66 508 aaPredicted RBP6.48□□□□□ -1.37
RFC1-202ENST00000381897 CRACR2AQ9BSW2 395 aa6.48□□□□□ -1.37
RFC1-202ENST00000381897 SPC25Q9HBM1 224 aa6.48□□□□□ -1.37
RFC1-202ENST00000381897 GEMIN8Q9NWZ8 242 aaKnown RBP6.48□□□□□ -1.37
RFC1-202ENST00000381897 CHPF2Q9P2E5 772 aa6.48□□□□□ -1.37
RFC1-202ENST00000381897 PHLPP2Q6ZVD8 1323 aa6.48□□□□□ -1.37
RFC1-202ENST00000381897 EIF5P55010 431 aaKnown RBP6.48□□□□□ -1.37
RFC1-202ENST00000381897 RRP15Q9Y3B9 282 aaKnown RBP6.48□□□□□ -1.37
RFC1-202ENST00000381897 CDC42BPAQ5VT25 1732 aa6.48□□□□□ -1.37
RFC1-202ENST00000381897 A6NNZ2 444 aa6.48□□□□□ -1.37
RFC1-202ENST00000381897 HNRNPCL1O60812 293 aaKnown RBP6.48□□□□□ -1.37
RFC1-202ENST00000381897 G3BP1Q13283 466 aaKnown RBP eCLIP6.48□□□□□ -1.372e-11■■■■□ 21.6
RFC1-202ENST00000381897 DCTN1Q14203 1278 aa6.48□□□□□ -1.37
RFC1-202ENST00000381897 TUBB8Q3ZCM7 444 aa6.48□□□□□ -1.37
RFC1-202ENST00000381897 SARM1Q6SZW1 724 aa6.48□□□□□ -1.37
RFC1-202ENST00000381897 RNF34Q969K3 372 aa6.48□□□□□ -1.37
RFC1-202ENST00000381897 NLRP2Q9NX02 1062 aa6.48□□□□□ -1.37
RFC1-202ENST00000381897 TPD52P55327 224 aaPredicted RBP6.47□□□□□ -1.37
RFC1-202ENST00000381897 GNG11P61952 73 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 FAPQ12884 760 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 PDAP1Q13442 181 aaKnown RBP6.47□□□□□ -1.37
RFC1-202ENST00000381897 DIXDC1Q155Q3 683 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 KMT5BQ4FZB7 885 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 DSTYKQ6XUX3 929 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 RSRC2Q7L4I2 434 aaKnown RBP6.47□□□□□ -1.37
RFC1-202ENST00000381897 VPS18Q9P253 973 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 MED14O60244 1454 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 PLA2R1Q13018 1463 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 DIAPH2O60879 1101 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 FMNL1O95466 1100 aaPredicted RBP6.47□□□□□ -1.37
RFC1-202ENST00000381897 SSTR3P32745 418 aaPredicted RBP6.47□□□□□ -1.37
RFC1-202ENST00000381897 SLC9A5Q14940 896 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 FCHSD1Q86WN1 690 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 CPXCR1Q8N123 301 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 FSIP1Q8NA03 581 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 PROCA1Q8NCQ7 364 aaPredicted RBP6.47□□□□□ -1.37
RFC1-202ENST00000381897 FMNL2Q96PY5 1086 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 CDC6Q99741 560 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 NUDT16L1Q9BRJ7 211 aaKnown RBP6.47□□□□□ -1.37
RFC1-202ENST00000381897 PCDHB8Q9UN66 801 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 PCDHB13Q9Y5F0 798 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 COL4A3BPQ9Y5P4 624 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 SHROOM2Q13796 1616 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 TTC41PQ6P2S7 1318 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 A6NJR5 290 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 ACTN2P35609 894 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 LRMPQ12912 555 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 DNAJC21Q5F1R6 531 aaKnown RBP6.47□□□□□ -1.37
RFC1-202ENST00000381897 PLA2G4DQ86XP0 818 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 CCDC144CPQ8IYA2 1237 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 NEK11Q8NG66 645 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 FAM161BQ96MY7 647 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 GBP5Q96PP8 586 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 PLEKHF1Q96S99 279 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 DDX23Q9BUQ8 820 aaKnown RBP6.47□□□□□ -1.37
RFC1-202ENST00000381897 TM6SF1Q9BZW5 370 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 ASXL2Q76L83 1435 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 RTL1A6NKG5 1358 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 GOLGA6L7A0A1B0GV03 622 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 CPLX1O14810 134 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 PNMA6AP0CW24 399 aaPredicted RBP6.47□□□□□ -1.37
RFC1-202ENST00000381897 PLIN5Q00G26 463 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 PPP2R3AQ06190 1150 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 EFCAB13Q8IY85 973 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 AOPEPQ8N6M6 819 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 FBXO18Q8NFZ0 1043 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 CAGE1Q8TC20 777 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 EVI5LQ96CN4 794 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 KCNF1Q9H3M0 494 aa6.47□□□□□ -1.37
RFC1-202ENST00000381897 MSH6P52701 1360 aa6.46□□□□□ -1.37
RFC1-202ENST00000381897 MYO1CO00159 1063 aa6.46□□□□□ -1.37
RFC1-202ENST00000381897 SRGAP3O43295 1099 aa6.46□□□□□ -1.37
RFC1-202ENST00000381897 NF2P35240 595 aa6.46□□□□□ -1.37
RFC1-202ENST00000381897 MAGEA9P43362 315 aa6.46□□□□□ -1.37
RFC1-202ENST00000381897 BLVRAP53004 296 aa6.46□□□□□ -1.37
RFC1-202ENST00000381897 ATP8B2P98198 1209 aa6.46□□□□□ -1.37
RFC1-202ENST00000381897 CEBPZQ03701 1054 aaKnown RBP6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms