RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 COL1A1P02452 1464 aaPredicted RBP22.72■■□□□ 1.23
GMDS-201ENST00000380805 SALL1Q9NSC2 1324 aa22.72■■□□□ 1.23
GMDS-201ENST00000380805 MCM5P33992 734 aa22.71■■□□□ 1.23
GMDS-201ENST00000380805 TMEM63CQ9P1W3 806 aa22.71■■□□□ 1.23
GMDS-201ENST00000380805 CNPY2Q9Y2B0 182 aa22.71■■□□□ 1.23
GMDS-201ENST00000380805 PDS5AQ29RF7 1337 aaKnown RBP22.71■■□□□ 1.23
GMDS-201ENST00000380805 VPS37CA5D8V6 355 aaPredicted RBP22.71■■□□□ 1.23
GMDS-201ENST00000380805 APOBRQ0VD83 1088 aa22.71■■□□□ 1.23
GMDS-201ENST00000380805 CSPP1Q1MSJ5 1256 aa22.71■■□□□ 1.23
GMDS-201ENST00000380805 TRAPPC3LQ5T215 181 aa22.71■■□□□ 1.23
GMDS-201ENST00000380805 CDC37L1Q7L3B6 337 aa22.71■■□□□ 1.23
GMDS-201ENST00000380805 MAGEB6Q8N7X4 407 aa22.71■■□□□ 1.23
GMDS-201ENST00000380805 NSUN7Q8NE18 718 aaKnown RBP22.71■■□□□ 1.23
GMDS-201ENST00000380805 AIDAQ96BJ3 306 aa22.71■■□□□ 1.23
GMDS-201ENST00000380805 NCLP19338 710 aaKnown RBP22.7■■□□□ 1.22
GMDS-201ENST00000380805 PDIA3P30101 505 aaKnown RBP22.7■■□□□ 1.22
GMDS-201ENST00000380805 HAND2P61296 217 aa22.7■■□□□ 1.22
GMDS-201ENST00000380805 RPS8P62241 208 aaKnown RBP22.7■■□□□ 1.22
GMDS-201ENST00000380805 HMGN5P82970 282 aaKnown RBP22.7■■□□□ 1.22
GMDS-201ENST00000380805 AKT1S1Q96B36 256 aa22.7■■□□□ 1.22
GMDS-201ENST00000380805 GNL3LQ9NVN8 582 aaKnown RBP22.7■■□□□ 1.22
GMDS-201ENST00000380805 MAST2Q6P0Q8 1798 aa22.69■■□□□ 1.22
GMDS-201ENST00000380805 PATL2C9JE40 543 aaKnown RBP22.69■■□□□ 1.22
GMDS-201ENST00000380805 SOCS7O14512 581 aa22.69■■□□□ 1.22
GMDS-201ENST00000380805 SEMA3EO15041 775 aa22.69■■□□□ 1.22
GMDS-201ENST00000380805 JAK2O60674 1132 aa22.69■■□□□ 1.22
GMDS-201ENST00000380805 GNAT2P19087 354 aa22.69■■□□□ 1.22
GMDS-201ENST00000380805 TM4SF1P30408 202 aa22.69■■□□□ 1.22
GMDS-201ENST00000380805 ANTXR2P58335 489 aa22.69■■□□□ 1.22
GMDS-201ENST00000380805 CTDNEP1O95476 244 aa22.68■■□□□ 1.22
GMDS-201ENST00000380805 RFC4P35249 363 aa22.68■■□□□ 1.22
GMDS-201ENST00000380805 UBE2HP62256 183 aa22.68■■□□□ 1.22
GMDS-201ENST00000380805 ANKRD2Q9GZV1 360 aa22.68■■□□□ 1.22
GMDS-201ENST00000380805 GDPD2Q9HCC8 539 aa22.68■■□□□ 1.22
GMDS-201ENST00000380805 BRPF3Q9ULD4 1205 aa22.68■■□□□ 1.22
GMDS-201ENST00000380805 KIAA1551Q9HCM1 1747 aa22.68■■□□□ 1.22
GMDS-201ENST00000380805 PRC1O43663 620 aa22.68■■□□□ 1.22
GMDS-201ENST00000380805 GADD45BO75293 160 aaPredicted RBP22.68■■□□□ 1.22
GMDS-201ENST00000380805 RALYLQ86SE5 291 aaKnown RBP22.68■■□□□ 1.22
GMDS-201ENST00000380805 KLHL34Q8N239 644 aa22.68■■□□□ 1.22
GMDS-201ENST00000380805 EPB41L4AQ9HCS5 686 aaPredicted RBP22.68■■□□□ 1.22
GMDS-201ENST00000380805 MBD4O95243 580 aa22.67■■□□□ 1.22
GMDS-201ENST00000380805 CAVIN4Q5BKX8 364 aa22.67■■□□□ 1.22
GMDS-201ENST00000380805 FBXO33Q7Z6M2 555 aa22.67■■□□□ 1.22
GMDS-201ENST00000380805 TBC1D10CQ8IV04 446 aa22.67■■□□□ 1.22
GMDS-201ENST00000380805 SYAP1Q96A49 352 aaPredicted RBP22.67■■□□□ 1.22
GMDS-201ENST00000380805 RBM27Q9P2N5 1060 aaKnown RBP22.67■■□□□ 1.22
GMDS-201ENST00000380805 ELP1O95163 1332 aa22.67■■□□□ 1.22
GMDS-201ENST00000380805 DTNBO60941 627 aa22.66■■□□□ 1.22
GMDS-201ENST00000380805 DNM1Q05193 864 aaKnown RBP22.66■■□□□ 1.22
GMDS-201ENST00000380805 FAM84BQ96KN1 310 aaPredicted RBP22.66■■□□□ 1.22
GMDS-201ENST00000380805 DENND2AQ9ULE3 1009 aa22.66■■□□□ 1.22
GMDS-201ENST00000380805 KIF3AQ9Y496 699 aa22.66■■□□□ 1.22
GMDS-201ENST00000380805 GYG1P46976 350 aa22.65■■□□□ 1.22
GMDS-201ENST00000380805 NFIXQ14938 502 aa22.65■■□□□ 1.22
GMDS-201ENST00000380805 SLC15A2Q16348 729 aa22.65■■□□□ 1.22
GMDS-201ENST00000380805 FOXD4L6Q3SYB3 417 aaPredicted RBP22.65■■□□□ 1.22
GMDS-201ENST00000380805 NAA16Q6N069 864 aaPredicted RBP22.65■■□□□ 1.22
GMDS-201ENST00000380805 FOXD4L3Q6VB84 417 aaPredicted RBP22.65■■□□□ 1.22
GMDS-201ENST00000380805 IFNL3Q8IZI9 196 aa22.65■■□□□ 1.22
GMDS-201ENST00000380805 PTPDC1A2A3K4 754 aa22.65■■□□□ 1.22
GMDS-201ENST00000380805 GSG1L2A8MUP6 293 aa22.65■■□□□ 1.22
GMDS-201ENST00000380805 TRDNQ13061 729 aa22.65■■□□□ 1.22
GMDS-201ENST00000380805 CHST3Q7LGC8 479 aa22.65■■□□□ 1.22
GMDS-201ENST00000380805 IRS2Q9Y4H2 1338 aa22.65■■□□□ 1.22
GMDS-201ENST00000380805 PHF14O94880 888 aa22.64■■□□□ 1.21
GMDS-201ENST00000380805 KRT85P78386 507 aa22.64■■□□□ 1.21
GMDS-201ENST00000380805 LRSAM1Q6UWE0 723 aa22.64■■□□□ 1.21
GMDS-201ENST00000380805 TFCP2L1Q9NZI6 479 aa22.64■■□□□ 1.21
GMDS-201ENST00000380805 LRP2BPQ9P2M1 347 aa22.64■■□□□ 1.21
GMDS-201ENST00000380805 RESTQ13127 1097 aa22.63■■□□□ 1.21
GMDS-201ENST00000380805 TMED8Q6PL24 325 aaPredicted RBP22.63■■□□□ 1.21
GMDS-201ENST00000380805 RGS22Q8NE09 1264 aa22.63■■□□□ 1.21
GMDS-201ENST00000380805 PANK2Q9BZ23 570 aa22.63■■□□□ 1.21
GMDS-201ENST00000380805 ZSCAN16Q9H4T2 348 aaPredicted RBP22.63■■□□□ 1.21
GMDS-201ENST00000380805 ARMT1Q9H993 441 aa22.63■■□□□ 1.21
GMDS-201ENST00000380805 STK32BQ9NY57 414 aa22.63■■□□□ 1.21
GMDS-201ENST00000380805 FIBPO43427 364 aa22.62■■□□□ 1.21
GMDS-201ENST00000380805 APPP05067 770 aa22.62■■□□□ 1.21
GMDS-201ENST00000380805 HMGB2P26583 209 aaKnown RBP22.62■■□□□ 1.21
GMDS-201ENST00000380805 LCORLQ8N3X6 602 aa22.62■■□□□ 1.21
GMDS-201ENST00000380805 FAM184AQ8NB25 1140 aa22.62■■□□□ 1.21
GMDS-201ENST00000380805 NAPBQ9H115 298 aa22.62■■□□□ 1.21
GMDS-201ENST00000380805 HPS5Q9UPZ3 1129 aa22.62■■□□□ 1.21
GMDS-201ENST00000380805 CCDC88AQ3V6T2 1871 aa22.62■■□□□ 1.21
GMDS-201ENST00000380805 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.62■■□□□ 1.21
GMDS-201ENST00000380805 WTIPA6NIX2 430 aaPredicted RBP22.62■■□□□ 1.21
GMDS-201ENST00000380805 IGSF3O75054 1194 aa22.62■■□□□ 1.21
GMDS-201ENST00000380805 TMEM87BQ96K49 555 aa22.62■■□□□ 1.21
GMDS-201ENST00000380805 GPHNQ9NQX3 736 aaPredicted RBP22.62■■□□□ 1.21
GMDS-201ENST00000380805 DHX16O60231 1041 aaKnown RBP22.61■■□□□ 1.21
GMDS-201ENST00000380805 CCT2P78371 535 aaKnown RBP22.61■■□□□ 1.21
GMDS-201ENST00000380805 NACAP1Q9BZK3 213 aa22.61■■□□□ 1.21
GMDS-201ENST00000380805 ANGEL1Q9UNK9 670 aaKnown RBP22.61■■□□□ 1.21
GMDS-201ENST00000380805 SH2B2O14492 632 aaPredicted RBP22.6■■□□□ 1.21
GMDS-201ENST00000380805 FERMT3Q86UX7 667 aa22.6■■□□□ 1.21
GMDS-201ENST00000380805 CNBD1Q8NA66 436 aa22.6■■□□□ 1.21
GMDS-201ENST00000380805 DDX11Q96FC9 970 aa22.6■■□□□ 1.21
GMDS-201ENST00000380805 MTA3Q9BTC8 594 aa22.6■■□□□ 1.21
GMDS-201ENST00000380805 SCAND2PQ9GZW5 306 aaPredicted RBP22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms