RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 AKNAD1Q5T1N1 836 aa10.7□□□□□ -0.7
PTPRA-204ENST00000380393 CAPRIN2Q6IMN6 1127 aaKnown RBP10.7□□□□□ -0.7
PTPRA-204ENST00000380393 TCP11Q8WWU5 503 aa10.7□□□□□ -0.7
PTPRA-204ENST00000380393 ERLIN1O75477 346 aa10.69□□□□□ -0.7
PTPRA-204ENST00000380393 CAPN15O75808 1086 aa10.69□□□□□ -0.7
PTPRA-204ENST00000380393 OR8K1Q8NGG5 319 aa10.69□□□□□ -0.7
PTPRA-204ENST00000380393 GOLGA1Q92805 767 aa10.69□□□□□ -0.7
PTPRA-204ENST00000380393 A0A1W2PP64 1363 aa10.69□□□□□ -0.7
PTPRA-204ENST00000380393 EPB41L2O43491 1005 aaKnown RBP10.69□□□□□ -0.7
PTPRA-204ENST00000380393 NAT1P18440 290 aa10.69□□□□□ -0.7
PTPRA-204ENST00000380393 MYBPC2Q14324 1141 aa10.69□□□□□ -0.7
PTPRA-204ENST00000380393 SLC30A9Q6PML9 568 aa10.69□□□□□ -0.7
PTPRA-204ENST00000380393 SMARCC1Q92922 1105 aaPredicted RBP10.69□□□□□ -0.7
PTPRA-204ENST00000380393 CCDC114Q96M63 670 aa10.69□□□□□ -0.7
PTPRA-204ENST00000380393 FMNL2Q96PY5 1086 aa10.69□□□□□ -0.7
PTPRA-204ENST00000380393 EPAS1Q99814 870 aa10.69□□□□□ -0.7
PTPRA-204ENST00000380393 RTEL1Q9NZ71 1219 aa10.69□□□□□ -0.7
PTPRA-204ENST00000380393 RGL1Q9NZL6 768 aa10.69□□□□□ -0.7
PTPRA-204ENST00000380393 SBNO2Q9Y2G9 1366 aa10.69□□□□□ -0.7
PTPRA-204ENST00000380393 CAVIN2O95810 425 aa10.69□□□□□ -0.7
PTPRA-204ENST00000380393 GSDMDP57764 484 aa10.69□□□□□ -0.7
PTPRA-204ENST00000380393 RASA3Q14644 834 aa10.69□□□□□ -0.7
PTPRA-204ENST00000380393 BEND6Q5SZJ8 279 aaPredicted RBP10.69□□□□□ -0.7
PTPRA-204ENST00000380393 TLDC1Q6P9B6 456 aa10.69□□□□□ -0.7
PTPRA-204ENST00000380393 PROSER2Q86WR7 435 aaPredicted RBP10.69□□□□□ -0.7
PTPRA-204ENST00000380393 SUGCTQ9HAC7 445 aa10.69□□□□□ -0.7
PTPRA-204ENST00000380393 ATP6V1DQ9Y5K8 247 aa10.69□□□□□ -0.7
PTPRA-204ENST00000380393 PARP3Q9Y6F1 533 aa10.69□□□□□ -0.7
PTPRA-204ENST00000380393 ZEB2O60315 1214 aa10.68□□□□□ -0.7
PTPRA-204ENST00000380393 RNF40O75150 1001 aa10.68□□□□□ -0.7
PTPRA-204ENST00000380393 FSBPO95073 299 aa10.68□□□□□ -0.7
PTPRA-204ENST00000380393 GNAI3P08754 354 aa10.68□□□□□ -0.7
PTPRA-204ENST00000380393 ZSCAN22P10073 491 aaPredicted RBP10.68□□□□□ -0.7
PTPRA-204ENST00000380393 TXLNAP40222 546 aa10.68□□□□□ -0.7
PTPRA-204ENST00000380393 ZBED6P86452 979 aa10.68□□□□□ -0.7
PTPRA-204ENST00000380393 SCLT1Q96NL6 688 aa10.68□□□□□ -0.7
PTPRA-204ENST00000380393 ATP6V0A4Q9HBG4 840 aa10.68□□□□□ -0.7
PTPRA-204ENST00000380393 FAM177A1Q8N128 213 aaPredicted RBP10.68□□□□□ -0.7
PTPRA-204ENST00000380393 FAM81AQ8TBF8 368 aa10.68□□□□□ -0.7
PTPRA-204ENST00000380393 BCAS4Q8TDM0 211 aa10.68□□□□□ -0.7
PTPRA-204ENST00000380393 SNCBQ16143 134 aa10.67□□□□□ -0.7
PTPRA-204ENST00000380393 RSRC2Q7L4I2 434 aaKnown RBP10.67□□□□□ -0.7
PTPRA-204ENST00000380393 XAGE2Q96GT9 111 aa10.67□□□□□ -0.7
PTPRA-204ENST00000380393 MMADHCQ9H3L0 296 aaPredicted RBP10.67□□□□□ -0.7
PTPRA-204ENST00000380393 BATF3Q9NR55 127 aa10.67□□□□□ -0.7
PTPRA-204ENST00000380393 KDM5AP29375 1690 aaKnown RBP10.67□□□□□ -0.7
PTPRA-204ENST00000380393 MYOM1P52179 1685 aa10.67□□□□□ -0.7
PTPRA-204ENST00000380393 KIF4AO95239 1232 aa10.67□□□□□ -0.7
PTPRA-204ENST00000380393 IQCB1Q15051 598 aa10.67□□□□□ -0.7
PTPRA-204ENST00000380393 MAB21L3Q8N8X9 362 aa10.67□□□□□ -0.7
PTPRA-204ENST00000380393 FAM163AQ96GL9 167 aaPredicted RBP10.67□□□□□ -0.7
PTPRA-204ENST00000380393 TRIM4Q9C037 500 aa10.67□□□□□ -0.7
PTPRA-204ENST00000380393 NAT10Q9H0A0 1025 aaKnown RBP10.67□□□□□ -0.7
PTPRA-204ENST00000380393 ZSWIM4Q9H7M6 989 aa10.67□□□□□ -0.7
PTPRA-204ENST00000380393 TRIM35Q9UPQ4 493 aa10.67□□□□□ -0.7
PTPRA-204ENST00000380393 SAMM50Q9Y512 469 aa10.67□□□□□ -0.7
PTPRA-204ENST00000380393 ZNF335Q9H4Z2 1342 aaPredicted RBP10.67□□□□□ -0.7
PTPRA-204ENST00000380393 SPDYE3A6NKU9 549 aa10.67□□□□□ -0.7
PTPRA-204ENST00000380393 ZBTB7BO15156 539 aaPredicted RBP10.67□□□□□ -0.7
PTPRA-204ENST00000380393 MAGEA10P43363 369 aaPredicted RBP10.67□□□□□ -0.7
PTPRA-204ENST00000380393 CCDC15Q0P6D6 951 aa10.67□□□□□ -0.7
PTPRA-204ENST00000380393 PLEKHM2Q8IWE5 1019 aa10.67□□□□□ -0.7
PTPRA-204ENST00000380393 DDX17Q92841 729 aaKnown RBP10.67□□□□□ -0.7
PTPRA-204ENST00000380393 TPCN1Q9ULQ1 816 aa10.67□□□□□ -0.7
PTPRA-204ENST00000380393 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.67□□□□□ -0.7
PTPRA-204ENST00000380393 CASP8Q14790 479 aa10.66□□□□□ -0.7
PTPRA-204ENST00000380393 ARHGAP22Q7Z5H3 698 aa10.66□□□□□ -0.7
PTPRA-204ENST00000380393 NME9Q86XW9 330 aa10.66□□□□□ -0.7
PTPRA-204ENST00000380393 SIRT2Q8IXJ6 389 aa10.66□□□□□ -0.7
PTPRA-204ENST00000380393 SLX1AQ9BQ83 275 aa10.66□□□□□ -0.7
PTPRA-204ENST00000380393 LARP6Q9BRS8 491 aaKnown RBP10.66□□□□□ -0.7
PTPRA-204ENST00000380393 UPF3BQ9BZI7 483 aaKnown RBP10.66□□□□□ -0.7
PTPRA-204ENST00000380393 SSBP05455 408 aaKnown RBP eCLIP10.66□□□□□ -0.7
PTPRA-204ENST00000380393 PDHBP11177 359 aa10.66□□□□□ -0.7
PTPRA-204ENST00000380393 SCNN1BP51168 640 aa10.66□□□□□ -0.7
PTPRA-204ENST00000380393 DNM1Q05193 864 aaKnown RBP10.66□□□□□ -0.7
PTPRA-204ENST00000380393 CCDC40Q4G0X9 1142 aa10.66□□□□□ -0.7
PTPRA-204ENST00000380393 ACBD5Q5T8D3 534 aaPredicted RBP10.66□□□□□ -0.7
PTPRA-204ENST00000380393 TSHZ3Q63HK5 1081 aa10.66□□□□□ -0.7
PTPRA-204ENST00000380393 SARM1Q6SZW1 724 aa10.66□□□□□ -0.7
PTPRA-204ENST00000380393 CCDC61Q9Y6R9 512 aa10.66□□□□□ -0.7
PTPRA-204ENST00000380393 LMTK3Q96Q04 1460 aa10.66□□□□□ -0.7
PTPRA-204ENST00000380393 AHCYL1O43865 530 aa10.66□□□□□ -0.7
PTPRA-204ENST00000380393 ATP6V1G1O75348 118 aa10.66□□□□□ -0.7
PTPRA-204ENST00000380393 SDSP20132 328 aa10.66□□□□□ -0.7
PTPRA-204ENST00000380393 ALDH1B1P30837 517 aa10.66□□□□□ -0.7
PTPRA-204ENST00000380393 LRRC23Q53EV4 343 aaPredicted RBP10.66□□□□□ -0.7
PTPRA-204ENST00000380393 MFN1Q8IWA4 741 aa10.66□□□□□ -0.7
PTPRA-204ENST00000380393 ABCB6Q9NP58 842 aa10.66□□□□□ -0.7
PTPRA-204ENST00000380393 SUN2Q9UH99 717 aa10.66□□□□□ -0.7
PTPRA-204ENST00000380393 PPIP5K1Q6PFW1 1433 aa10.66□□□□□ -0.7
PTPRA-204ENST00000380393 BECN2A8MW95 431 aa10.65□□□□□ -0.7
PTPRA-204ENST00000380393 H7C1W4 665 aa10.65□□□□□ -0.7
PTPRA-204ENST00000380393 F13A1P00488 732 aa10.65□□□□□ -0.7
PTPRA-204ENST00000380393 CWF19L1Q69YN2 538 aaKnown RBP10.65□□□□□ -0.7
PTPRA-204ENST00000380393 ARMC9Q7Z3E5 817 aa10.65□□□□□ -0.7
PTPRA-204ENST00000380393 TSPYL6Q8N831 410 aa10.65□□□□□ -0.7
PTPRA-204ENST00000380393 HNRNPLLQ8WVV9 542 aaKnown RBP10.65□□□□□ -0.7
PTPRA-204ENST00000380393 RBM17Q96I25 401 aaKnown RBP10.65□□□□□ -0.7
PTPRA-204ENST00000380393 ORAI2Q96SN7 254 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms