RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 MCM5P33992 734 aa14.16□□□□□ -0.14
USP3-202ENST00000380324 SLC10A5Q5PT55 438 aa14.16□□□□□ -0.14
USP3-202ENST00000380324 TRAPPC3LQ5T215 181 aa14.16□□□□□ -0.14
USP3-202ENST00000380324 RAB11FIP4Q86YS3 637 aa14.16□□□□□ -0.14
USP3-202ENST00000380324 NSUN7Q8NE18 718 aaKnown RBP14.16□□□□□ -0.14
USP3-202ENST00000380324 QTRT2Q9H974 415 aaKnown RBP14.16□□□□□ -0.14
USP3-202ENST00000380324 UBR3Q6ZT12 1888 aa14.16□□□□□ -0.14
USP3-202ENST00000380324 ONECUT3O60422 494 aaPredicted RBP14.15□□□□□ -0.14
USP3-202ENST00000380324 KLRK1P26718 216 aa14.15□□□□□ -0.14
USP3-202ENST00000380324 PDIA3P30101 505 aaKnown RBP14.15□□□□□ -0.14
USP3-202ENST00000380324 ANTXR2P58335 489 aa14.15□□□□□ -0.14
USP3-202ENST00000380324 EPB41L4AQ9HCS5 686 aaPredicted RBP14.15□□□□□ -0.14
USP3-202ENST00000380324 ZNF804BA4D1E1 1349 aa14.15□□□□□ -0.14
USP3-202ENST00000380324 H3BQV1 296 aa14.15□□□□□ -0.14
USP3-202ENST00000380324 CTDNEP1O95476 244 aa14.15□□□□□ -0.14
USP3-202ENST00000380324 RPS8P62241 208 aaKnown RBP14.15□□□□□ -0.14
USP3-202ENST00000380324 TRDNQ13061 729 aa14.15□□□□□ -0.14
USP3-202ENST00000380324 UBE4AQ14139 1066 aa14.15□□□□□ -0.14
USP3-202ENST00000380324 IFFO2Q5TF58 517 aa14.15□□□□□ -0.14
USP3-202ENST00000380324 AEBP2Q6ZN18 517 aaPredicted RBP14.15□□□□□ -0.14
USP3-202ENST00000380324 LCORLQ8N3X6 602 aa14.15□□□□□ -0.14
USP3-202ENST00000380324 BCL11BQ9C0K0 894 aaPredicted RBP14.15□□□□□ -0.14
USP3-202ENST00000380324 NAPBQ9H115 298 aa14.15□□□□□ -0.14
USP3-202ENST00000380324 CARMIL3Q8ND23 1372 aa14.15□□□□□ -0.14
USP3-202ENST00000380324 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.14□□□□□ -0.15
USP3-202ENST00000380324 GOLGA8BA8MQT2 603 aa14.14□□□□□ -0.15
USP3-202ENST00000380324 CAVIN4Q5BKX8 364 aa14.14□□□□□ -0.15
USP3-202ENST00000380324 NKX2-3Q8TAU0 364 aa14.14□□□□□ -0.15
USP3-202ENST00000380324 GNL3LQ9NVN8 582 aaKnown RBP14.14□□□□□ -0.15
USP3-202ENST00000380324 NEDD4P46934 1319 aa14.14□□□□□ -0.15
USP3-202ENST00000380324 KLF18A0A0U1RQI7 1052 aa14.14□□□□□ -0.15
USP3-202ENST00000380324 PRKAB2O43741 272 aa14.14□□□□□ -0.15
USP3-202ENST00000380324 NFIXQ14938 502 aa14.14□□□□□ -0.15
USP3-202ENST00000380324 SLC51AQ86UW1 340 aa14.14□□□□□ -0.15
USP3-202ENST00000380324 SMARCC2Q8TAQ2 1214 aa14.14□□□□□ -0.15
USP3-202ENST00000380324 LLPHQ9BRT6 129 aaKnown RBP14.14□□□□□ -0.15
USP3-202ENST00000380324 RTN4Q9NQC3 1192 aaKnown RBP14.14□□□□□ -0.15
USP3-202ENST00000380324 RAI14Q9P0K7 980 aa14.14□□□□□ -0.15
USP3-202ENST00000380324 MYH15Q9Y2K3 1946 aa14.13□□□□□ -0.15
USP3-202ENST00000380324 B4E1Z4 1266 aa14.13□□□□□ -0.15
USP3-202ENST00000380324 NASPP49321 788 aaPredicted RBP14.13□□□□□ -0.15
USP3-202ENST00000380324 UBE2HP62256 183 aa14.13□□□□□ -0.15
USP3-202ENST00000380324 KRT85P78386 507 aa14.13□□□□□ -0.15
USP3-202ENST00000380324 ADGRA1Q86SQ6 560 aa14.13□□□□□ -0.15
USP3-202ENST00000380324 SYAP1Q96A49 352 aaPredicted RBP14.13□□□□□ -0.15
USP3-202ENST00000380324 CACNA1SQ13698 1873 aa14.13□□□□□ -0.15
USP3-202ENST00000380324 PDIA4P13667 645 aaKnown RBP14.13□□□□□ -0.15
USP3-202ENST00000380324 TDO2P48775 406 aa14.13□□□□□ -0.15
USP3-202ENST00000380324 IFNL3Q8IZI9 196 aa14.13□□□□□ -0.15
USP3-202ENST00000380324 CNBD1Q8NA66 436 aa14.13□□□□□ -0.15
USP3-202ENST00000380324 ZNF274Q96GC6 653 aaPredicted RBP14.13□□□□□ -0.15
USP3-202ENST00000380324 INCENPQ9NQS7 918 aa14.13□□□□□ -0.15
USP3-202ENST00000380324 SLC4A4Q9Y6R1 1079 aa14.13□□□□□ -0.15
USP3-202ENST00000380324 TRIM37O94972 964 aa14.12□□□□□ -0.15
USP3-202ENST00000380324 CYP7A1P22680 504 aa14.12□□□□□ -0.15
USP3-202ENST00000380324 HMGN5P82970 282 aaKnown RBP14.12□□□□□ -0.15
USP3-202ENST00000380324 CTDSPL2Q05D32 466 aa14.12□□□□□ -0.15
USP3-202ENST00000380324 CSPP1Q1MSJ5 1256 aa14.12□□□□□ -0.15
USP3-202ENST00000380324 STK11IPQ8N1F8 1099 aa14.12□□□□□ -0.15
USP3-202ENST00000380324 FAM84BQ96KN1 310 aaPredicted RBP14.12□□□□□ -0.15
USP3-202ENST00000380324 TFCP2L1Q9NZI6 479 aa14.12□□□□□ -0.15
USP3-202ENST00000380324 BAZ2AQ9UIF9 1905 aaKnown RBP14.12□□□□□ -0.15
USP3-202ENST00000380324 SALL1Q9NSC2 1324 aa14.12□□□□□ -0.15
USP3-202ENST00000380324 GSG1L2A8MUP6 293 aa14.12□□□□□ -0.15
USP3-202ENST00000380324 PATL2C9JE40 543 aaKnown RBP14.12□□□□□ -0.15
USP3-202ENST00000380324 LRSAM1Q6UWE0 723 aa14.12□□□□□ -0.15
USP3-202ENST00000380324 CYB5R4Q7L1T6 521 aa14.12□□□□□ -0.15
USP3-202ENST00000380324 GUCY1B3Q02153 619 aa14.11□□□□□ -0.15
USP3-202ENST00000380324 TTC6Q86TZ1 520 aa14.11□□□□□ -0.15
USP3-202ENST00000380324 FBXL16Q8N461 479 aa14.11□□□□□ -0.15
USP3-202ENST00000380324 TFIP11Q9UBB9 837 aaKnown RBP14.11□□□□□ -0.15
USP3-202ENST00000380324 TIAM2Q8IVF5 1701 aa14.11□□□□□ -0.15
USP3-202ENST00000380324 ZMYM6O95789 1325 aa14.11□□□□□ -0.15
USP3-202ENST00000380324 KRT27Q7Z3Y8 459 aa14.1□□□□□ -0.15
USP3-202ENST00000380324 SDR42E1Q8WUS8 393 aa14.1□□□□□ -0.15
USP3-202ENST00000380324 RBSNQ9H1K0 784 aa14.1□□□□□ -0.15
USP3-202ENST00000380324 JAG2Q9Y219 1238 aa14.1□□□□□ -0.15
USP3-202ENST00000380324 KIF3AQ9Y496 699 aa14.1□□□□□ -0.15
USP3-202ENST00000380324 PNPLA7Q6ZV29 1317 aa14.1□□□□□ -0.15
USP3-202ENST00000380324 RXRAP19793 462 aa14.1□□□□□ -0.15
USP3-202ENST00000380324 EVCP57679 992 aa14.1□□□□□ -0.15
USP3-202ENST00000380324 RESTQ13127 1097 aa14.1□□□□□ -0.15
USP3-202ENST00000380324 TOMM22Q9NS69 142 aa14.1□□□□□ -0.15
USP3-202ENST00000380324 ANGEL1Q9UNK9 670 aaKnown RBP14.1□□□□□ -0.15
USP3-202ENST00000380324 HPS5Q9UPZ3 1129 aa14.1□□□□□ -0.15
USP3-202ENST00000380324 TM4SF1P30408 202 aa14.09□□□□□ -0.15
USP3-202ENST00000380324 CHAF1AQ13111 956 aaPredicted RBP14.09□□□□□ -0.15
USP3-202ENST00000380324 RRP12Q5JTH9 1297 aaKnown RBP14.09□□□□□ -0.15
USP3-202ENST00000380324 NACAP1Q9BZK3 213 aa14.09□□□□□ -0.15
USP3-202ENST00000380324 WDR19Q8NEZ3 1342 aa14.09□□□□□ -0.15
USP3-202ENST00000380324 CPLX1O14810 134 aa14.09□□□□□ -0.15
USP3-202ENST00000380324 KDM4AO75164 1064 aa14.09□□□□□ -0.15
USP3-202ENST00000380324 GNAT2P19087 354 aa14.09□□□□□ -0.15
USP3-202ENST00000380324 ALX1Q15699 326 aa14.09□□□□□ -0.15
USP3-202ENST00000380324 RNF214Q8ND24 703 aa14.09□□□□□ -0.15
USP3-202ENST00000380324 SPATA32Q96LK8 384 aa14.09□□□□□ -0.15
USP3-202ENST00000380324 ANKRD2Q9GZV1 360 aa14.09□□□□□ -0.15
USP3-202ENST00000380324 SENP2Q9HC62 589 aa14.09□□□□□ -0.15
USP3-202ENST00000380324 ANKIB1Q9P2G1 1089 aa14.09□□□□□ -0.15
USP3-202ENST00000380324 GOLGB1Q14789 3259 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms