RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 RAI14Q9P0K7 980 aa13.06□□□□□ -0.32
SMAD9-202ENST00000379826 LRP2BPQ9P2M1 347 aa13.06□□□□□ -0.32
SMAD9-202ENST00000379826 MAGEC2Q9UBF1 373 aaPredicted RBP13.06□□□□□ -0.32
SMAD9-202ENST00000379826 PARP3Q9Y6F1 533 aa13.06□□□□□ -0.32
SMAD9-202ENST00000379826 SLC9C2Q5TAH2 1124 aa13.06□□□□□ -0.32
SMAD9-202ENST00000379826 ZKSCAN3Q9BRR0 538 aa13.06□□□□□ -0.32
SMAD9-202ENST00000379826 ZNF652Q9Y2D9 606 aa13.06□□□□□ -0.32
SMAD9-202ENST00000379826 ZBTB43O43298 467 aa13.06□□□□□ -0.32
SMAD9-202ENST00000379826 EIF3JO75822 258 aaKnown RBP13.06□□□□□ -0.32
SMAD9-202ENST00000379826 JAKMIP3Q5VZ66 844 aa13.06□□□□□ -0.32
SMAD9-202ENST00000379826 RUFY1Q96T51 708 aa13.06□□□□□ -0.32
SMAD9-202ENST00000379826 TAF6LQ9Y6J9 622 aa13.06□□□□□ -0.32
SMAD9-202ENST00000379826 LDHAL6AQ6ZMR3 332 aa13.06□□□□□ -0.32
SMAD9-202ENST00000379826 EVCP57679 992 aa13.05□□□□□ -0.32
SMAD9-202ENST00000379826 PLA2G4DQ86XP0 818 aa13.05□□□□□ -0.32
SMAD9-202ENST00000379826 MPHOSPH8Q99549 860 aa13.05□□□□□ -0.32
SMAD9-202ENST00000379826 ABCF2Q9UG63 623 aa13.05□□□□□ -0.32
SMAD9-202ENST00000379826 CEP131Q9UPN4 1083 aa13.05□□□□□ -0.32
SMAD9-202ENST00000379826 NRKQ7Z2Y5 1582 aa13.05□□□□□ -0.32
SMAD9-202ENST00000379826 PDE4CQ08493 712 aa13.05□□□□□ -0.32
SMAD9-202ENST00000379826 SLC4A8Q2Y0W8 1093 aa13.05□□□□□ -0.32
SMAD9-202ENST00000379826 NSUN7Q8NE18 718 aaKnown RBP13.05□□□□□ -0.32
SMAD9-202ENST00000379826 PPP1R13BQ96KQ4 1090 aa13.05□□□□□ -0.32
SMAD9-202ENST00000379826 ORAI2Q96SN7 254 aa13.05□□□□□ -0.32
SMAD9-202ENST00000379826 TCEAL9Q9UHQ7 104 aa13.05□□□□□ -0.32
SMAD9-202ENST00000379826 MCM6Q14566 821 aa13.05□□□□□ -0.32
SMAD9-202ENST00000379826 CDC25BP30305 580 aa13.05□□□□□ -0.32
SMAD9-202ENST00000379826 DPCR1Q3MIW9 517 aa13.05□□□□□ -0.32
SMAD9-202ENST00000379826 MRFAP1L1Q96HT8 127 aa13.05□□□□□ -0.32
SMAD9-202ENST00000379826 UTP14CQ5TAP6 766 aaKnown RBP13.05□□□□□ -0.32
SMAD9-202ENST00000379826 BRAPQ7Z569 592 aa13.05□□□□□ -0.32
SMAD9-202ENST00000379826 BBXQ8WY36 941 aaPredicted RBP13.05□□□□□ -0.32
SMAD9-202ENST00000379826 ZNF496Q96IT1 587 aaPredicted RBP13.05□□□□□ -0.32
SMAD9-202ENST00000379826 SLC52A2Q9HAB3 445 aa13.05□□□□□ -0.32
SMAD9-202ENST00000379826 DHX58Q96C10 678 aa13.04□□□□□ -0.32
SMAD9-202ENST00000379826 DLC1Q96QB1 1528 aa13.04□□□□□ -0.32
SMAD9-202ENST00000379826 PFKFB1P16118 471 aa13.04□□□□□ -0.32
SMAD9-202ENST00000379826 MYL5Q02045 173 aa13.04□□□□□ -0.32
SMAD9-202ENST00000379826 CCDC47Q96A33 483 aaKnown RBP13.04□□□□□ -0.32
SMAD9-202ENST00000379826 B4E1Z4 1266 aa13.04□□□□□ -0.32
SMAD9-202ENST00000379826 HSPD1P10809 573 aaKnown RBP13.04□□□□□ -0.32
SMAD9-202ENST00000379826 PDIA3P30101 505 aaKnown RBP13.04□□□□□ -0.32
SMAD9-202ENST00000379826 GABPB1Q06547 395 aaPredicted RBP13.04□□□□□ -0.32
SMAD9-202ENST00000379826 BAG1Q99933 345 aaPredicted RBP13.04□□□□□ -0.32
SMAD9-202ENST00000379826 KIAA1468Q9P260 1216 aa13.04□□□□□ -0.32
SMAD9-202ENST00000379826 M0R2C6 588 aa13.04□□□□□ -0.32
SMAD9-202ENST00000379826 TRMT112Q9UI30 125 aaKnown RBP13.04□□□□□ -0.32
SMAD9-202ENST00000379826 CLTCQ00610 1675 aaKnown RBP13.03□□□□□ -0.32
SMAD9-202ENST00000379826 STARD3NLO95772 234 aa13.03□□□□□ -0.32
SMAD9-202ENST00000379826 ILDR1Q86SU0 546 aaPredicted RBP13.03□□□□□ -0.32
SMAD9-202ENST00000379826 KIAA1328Q86T90 577 aa13.03□□□□□ -0.32
SMAD9-202ENST00000379826 HAUS7Q99871 368 aa13.03□□□□□ -0.32
SMAD9-202ENST00000379826 BTG4Q9NY30 223 aa13.03□□□□□ -0.32
SMAD9-202ENST00000379826 PREX1Q8TCU6 1659 aa13.03□□□□□ -0.32
SMAD9-202ENST00000379826 ANKRD18BA2A2Z9 1011 aa13.03□□□□□ -0.32
SMAD9-202ENST00000379826 PPP2R3AQ06190 1150 aa13.03□□□□□ -0.32
SMAD9-202ENST00000379826 MTX1Q13505 466 aa13.03□□□□□ -0.32
SMAD9-202ENST00000379826 LRRC24Q50LG9 513 aa13.03□□□□□ -0.32
SMAD9-202ENST00000379826 TRMT44Q8IYL2 757 aaKnown RBP13.03□□□□□ -0.32
SMAD9-202ENST00000379826 IMPACTQ9P2X3 320 aa13.03□□□□□ -0.32
SMAD9-202ENST00000379826 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.03□□□□□ -0.32
SMAD9-202ENST00000379826 EPHA10Q5JZY3 1008 aa13.03□□□□□ -0.32
SMAD9-202ENST00000379826 ATL3Q6DD88 541 aa13.03□□□□□ -0.32
SMAD9-202ENST00000379826 ADALQ6DHV7 355 aa13.03□□□□□ -0.32
SMAD9-202ENST00000379826 XAGE2Q96GT9 111 aa13.03□□□□□ -0.32
SMAD9-202ENST00000379826 SEC31AO94979 1220 aaKnown RBP13.03□□□□□ -0.32
SMAD9-202ENST00000379826 TXLNAP40222 546 aa13.03□□□□□ -0.32
SMAD9-202ENST00000379826 MFSD6Q6ZSS7 791 aa13.03□□□□□ -0.32
SMAD9-202ENST00000379826 RPGRQ92834 1020 aaKnown RBP13.03□□□□□ -0.32
SMAD9-202ENST00000379826 CLIC6Q96NY7 704 aa13.03□□□□□ -0.32
SMAD9-202ENST00000379826 ARFGAP3Q9NP61 516 aa13.03□□□□□ -0.32
SMAD9-202ENST00000379826 TBX22Q9Y458 520 aa13.03□□□□□ -0.32
SMAD9-202ENST00000379826 SALL3Q9BXA9 1300 aa13.03□□□□□ -0.32
SMAD9-202ENST00000379826 ZNF335Q9H4Z2 1342 aaPredicted RBP13.03□□□□□ -0.32
SMAD9-202ENST00000379826 RHOXF2BP0C7M4 288 aa13.02□□□□□ -0.32
SMAD9-202ENST00000379826 ADKP55263 362 aaKnown RBP13.02□□□□□ -0.32
SMAD9-202ENST00000379826 HELBQ8NG08 1087 aaPredicted RBP13.02□□□□□ -0.32
SMAD9-202ENST00000379826 RHOXF2Q9BQY4 288 aa13.02□□□□□ -0.32
SMAD9-202ENST00000379826 RANBP6O60518 1105 aaKnown RBP13.02□□□□□ -0.32
SMAD9-202ENST00000379826 DDX17Q92841 729 aaKnown RBP13.02□□□□□ -0.32
SMAD9-202ENST00000379826 GPHNQ9NQX3 736 aaPredicted RBP13.02□□□□□ -0.33
SMAD9-202ENST00000379826 GJB4Q9NTQ9 266 aa13.02□□□□□ -0.33
SMAD9-202ENST00000379826 IQSEC3Q9UPP2 1182 aaPredicted RBP13.02□□□□□ -0.33
SMAD9-202ENST00000379826 CARMIL3Q8ND23 1372 aa13.02□□□□□ -0.33
SMAD9-202ENST00000379826 DSCC1Q9BVC3 393 aa13.02□□□□□ -0.33
SMAD9-202ENST00000379826 VPS18Q9P253 973 aa13.02□□□□□ -0.33
SMAD9-202ENST00000379826 KRBA2Q6ZNG9 492 aa13.01□□□□□ -0.33
SMAD9-202ENST00000379826 GOLGA1Q92805 767 aa13.01□□□□□ -0.33
SMAD9-202ENST00000379826 CEP170BQ9Y4F5 1589 aaPredicted RBP13.01□□□□□ -0.33
SMAD9-202ENST00000379826 EYA2O00167 538 aa13.01□□□□□ -0.33
SMAD9-202ENST00000379826 ZAP70P43403 619 aa13.01□□□□□ -0.33
SMAD9-202ENST00000379826 MAP3K12Q12852 859 aa13.01□□□□□ -0.33
SMAD9-202ENST00000379826 CCDC148Q8NFR7 591 aa13.01□□□□□ -0.33
SMAD9-202ENST00000379826 PLBD2Q8NHP8 589 aa13.01□□□□□ -0.33
SMAD9-202ENST00000379826 TMOD2Q9NZR1 351 aa13.01□□□□□ -0.33
SMAD9-202ENST00000379826 KCNH3Q9ULD8 1083 aa13.01□□□□□ -0.33
SMAD9-202ENST00000379826 GOLGA6L9A6NEM1 432 aa13.01□□□□□ -0.33
SMAD9-202ENST00000379826 MYCNP04198 464 aaPredicted RBP13.01□□□□□ -0.33
SMAD9-202ENST00000379826 ZFYP08048 801 aaPredicted RBP13.01□□□□□ -0.33
SMAD9-202ENST00000379826 EIF5P55010 431 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms