RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 TAF1P21675 1872 aa17.46■□□□□ 0.39
PRNP-201ENST00000379440 AMIGO3Q86WK7 504 aa17.46■□□□□ 0.39
PRNP-201ENST00000379440 ANKRD18AQ8IVF6 992 aa17.46■□□□□ 0.39
PRNP-201ENST00000379440 CCDC24Q8N4L8 307 aa17.46■□□□□ 0.39
PRNP-201ENST00000379440 TRIM44Q96DX7 344 aaPredicted RBP17.46■□□□□ 0.39
PRNP-201ENST00000379440 KLF18A0A0U1RQI7 1052 aa17.45■□□□□ 0.38
PRNP-201ENST00000379440 GNPATO15228 680 aa17.45■□□□□ 0.38
PRNP-201ENST00000379440 EVCP57679 992 aa17.45■□□□□ 0.38
PRNP-201ENST00000379440 SF3B3Q15393 1217 aaKnown RBP17.45■□□□□ 0.38
PRNP-201ENST00000379440 SPATA32Q96LK8 384 aa17.45■□□□□ 0.38
PRNP-201ENST00000379440 ARMT1Q9H993 441 aa17.45■□□□□ 0.38
PRNP-201ENST00000379440 INCENPQ9NQS7 918 aa17.45■□□□□ 0.38
PRNP-201ENST00000379440 LAMB2P55268 1798 aa17.45■□□□□ 0.38
PRNP-201ENST00000379440 SALL1Q9NSC2 1324 aa17.45■□□□□ 0.38
PRNP-201ENST00000379440 MBD4O95243 580 aa17.45■□□□□ 0.38
PRNP-201ENST00000379440 HMGN5P82970 282 aaKnown RBP17.45■□□□□ 0.38
PRNP-201ENST00000379440 RPS6KA4O75676 772 aa17.44■□□□□ 0.38
PRNP-201ENST00000379440 GYG1P46976 350 aa17.44■□□□□ 0.38
PRNP-201ENST00000379440 GUCY1B3Q02153 619 aa17.44■□□□□ 0.38
PRNP-201ENST00000379440 CELF1Q92879 486 aaKnown RBP17.44■□□□□ 0.38
PRNP-201ENST00000379440 NARFQ9UHQ1 456 aa17.44■□□□□ 0.38
PRNP-201ENST00000379440 CCNL1Q9UK58 526 aaPredicted RBP17.44■□□□□ 0.38
PRNP-201ENST00000379440 ZNF831Q5JPB2 1677 aa17.44■□□□□ 0.38
PRNP-201ENST00000379440 FDPSP14324 419 aaKnown RBP17.44■□□□□ 0.38
PRNP-201ENST00000379440 GIMAP6Q6P9H5 292 aa17.44■□□□□ 0.38
PRNP-201ENST00000379440 CYB5R4Q7L1T6 521 aa17.44■□□□□ 0.38
PRNP-201ENST00000379440 LEO1Q8WVC0 666 aaPredicted RBP17.44■□□□□ 0.38
PRNP-201ENST00000379440 SCAND2PQ9GZW5 306 aaPredicted RBP17.44■□□□□ 0.38
PRNP-201ENST00000379440 EPB41L4AQ9HCS5 686 aaPredicted RBP17.44■□□□□ 0.38
PRNP-201ENST00000379440 HPS5Q9UPZ3 1129 aa17.44■□□□□ 0.38
PRNP-201ENST00000379440 ELP1O95163 1332 aa17.44■□□□□ 0.38
PRNP-201ENST00000379440 PRKAB2O43741 272 aa17.44■□□□□ 0.38
PRNP-201ENST00000379440 TRDNQ13061 729 aa17.44■□□□□ 0.38
PRNP-201ENST00000379440 GOLGA8BA8MQT2 603 aa17.43■□□□□ 0.38
PRNP-201ENST00000379440 PATL2C9JE40 543 aaKnown RBP17.43■□□□□ 0.38
PRNP-201ENST00000379440 LIG1P18858 919 aa17.43■□□□□ 0.38
PRNP-201ENST00000379440 IFNL3Q8IZI9 196 aa17.43■□□□□ 0.38
PRNP-201ENST00000379440 B4E1Z4 1266 aa17.43■□□□□ 0.38
PRNP-201ENST00000379440 RC3H1Q5TC82 1133 aaKnown RBP17.43■□□□□ 0.38
PRNP-201ENST00000379440 SETDB2Q96T68 719 aa17.43■□□□□ 0.38
PRNP-201ENST00000379440 ZSCAN16Q9H4T2 348 aaPredicted RBP17.43■□□□□ 0.38
PRNP-201ENST00000379440 LRP2BPQ9P2M1 347 aa17.43■□□□□ 0.38
PRNP-201ENST00000379440 MINPP1Q9UNW1 487 aa17.43■□□□□ 0.38
PRNP-201ENST00000379440 BTAF1O14981 1849 aa17.42■□□□□ 0.38
PRNP-201ENST00000379440 CEBPZQ03701 1054 aaKnown RBP17.42■□□□□ 0.38
PRNP-201ENST00000379440 NAA16Q6N069 864 aaPredicted RBP17.42■□□□□ 0.38
PRNP-201ENST00000379440 LCORLQ8N3X6 602 aa17.42■□□□□ 0.38
PRNP-201ENST00000379440 MIGA1Q8NAN2 632 aa17.42■□□□□ 0.38
PRNP-201ENST00000379440 BSDC1Q9NW68 430 aaPredicted RBP17.42■□□□□ 0.38
PRNP-201ENST00000379440 ZPR1O75312 459 aa17.42■□□□□ 0.38
PRNP-201ENST00000379440 CTDSPL2Q05D32 466 aa17.42■□□□□ 0.38
PRNP-201ENST00000379440 SLC10A5Q5PT55 438 aa17.42■□□□□ 0.38
PRNP-201ENST00000379440 NEDD4P46934 1319 aa17.41■□□□□ 0.38
PRNP-201ENST00000379440 CARMIL3Q8ND23 1372 aa17.41■□□□□ 0.38
PRNP-201ENST00000379440 GSG1L2A8MUP6 293 aa17.41■□□□□ 0.38
PRNP-201ENST00000379440 LETM1O95202 739 aaPredicted RBP17.41■□□□□ 0.38
PRNP-201ENST00000379440 NBPF5PQ86XG9 351 aaPredicted RBP17.41■□□□□ 0.38
PRNP-201ENST00000379440 NAPBQ9H115 298 aa17.41■□□□□ 0.38
PRNP-201ENST00000379440 SENP2Q9HC62 589 aa17.41■□□□□ 0.38
PRNP-201ENST00000379440 ABCF2Q9UG63 623 aa17.41■□□□□ 0.38
PRNP-201ENST00000379440 TACC3Q9Y6A5 838 aa17.41■□□□□ 0.38
PRNP-201ENST00000379440 DOCK2Q92608 1830 aa17.41■□□□□ 0.38
PRNP-201ENST00000379440 ADD1P35611 737 aaKnown RBP17.41■□□□□ 0.38
PRNP-201ENST00000379440 OTUD7BQ6GQQ9 843 aa17.41■□□□□ 0.38
PRNP-201ENST00000379440 ARHGEF1Q92888 912 aaKnown RBP17.41■□□□□ 0.38
PRNP-201ENST00000379440 PGBD1Q96JS3 809 aa17.41■□□□□ 0.38
PRNP-201ENST00000379440 FTOQ9C0B1 505 aaKnown RBP eCLIP17.41■□□□□ 0.38
PRNP-201ENST00000379440 RTCBQ9Y3I0 505 aaKnown RBP17.41■□□□□ 0.38
PRNP-201ENST00000379440 KIF3AQ9Y496 699 aa17.41■□□□□ 0.38
PRNP-201ENST00000379440 SPATA31A6Q5VVP1 1343 aa17.41■□□□□ 0.38
PRNP-201ENST00000379440 GOLGA6L4A6NEF3 574 aa17.4■□□□□ 0.38
PRNP-201ENST00000379440 ALX1Q15699 326 aa17.4■□□□□ 0.38
PRNP-201ENST00000379440 ESPNB1AK53 854 aa17.4■□□□□ 0.38
PRNP-201ENST00000379440 ADGRA1Q86SQ6 560 aa17.4■□□□□ 0.38
PRNP-201ENST00000379440 PDLIM2Q96JY6 352 aa17.4■□□□□ 0.38
PRNP-201ENST00000379440 SLC4A4Q9Y6R1 1079 aa17.4■□□□□ 0.38
PRNP-201ENST00000379440 WDR19Q8NEZ3 1342 aa17.4■□□□□ 0.38
PRNP-201ENST00000379440 RXRAP19793 462 aa17.39■□□□□ 0.37
PRNP-201ENST00000379440 UBE4AQ14139 1066 aa17.39■□□□□ 0.37
PRNP-201ENST00000379440 CAMK4Q16566 473 aa17.39■□□□□ 0.37
PRNP-201ENST00000379440 MEX3CQ5U5Q3 659 aaKnown RBP17.39■□□□□ 0.37
PRNP-201ENST00000379440 GJD4Q96KN9 370 aaPredicted RBP17.39■□□□□ 0.37
PRNP-201ENST00000379440 ANGEL1Q9UNK9 670 aaKnown RBP17.39■□□□□ 0.37
PRNP-201ENST00000379440 ZNF804BA4D1E1 1349 aa17.39■□□□□ 0.37
PRNP-201ENST00000379440 SCN7AQ01118 1682 aa17.39■□□□□ 0.37
PRNP-201ENST00000379440 STK11IPQ8N1F8 1099 aa17.39■□□□□ 0.37
PRNP-201ENST00000379440 NLRP3Q96P20 1036 aa17.39■□□□□ 0.37
PRNP-201ENST00000379440 FUCA2Q9BTY2 467 aa17.39■□□□□ 0.37
PRNP-201ENST00000379440 NYXQ9GZU5 481 aa17.39■□□□□ 0.37
PRNP-201ENST00000379440 SH2B2O14492 632 aaPredicted RBP17.38■□□□□ 0.37
PRNP-201ENST00000379440 CYP7A1P22680 504 aa17.38■□□□□ 0.37
PRNP-201ENST00000379440 KLRK1P26718 216 aa17.38■□□□□ 0.37
PRNP-201ENST00000379440 ILDR1Q86SU0 546 aaPredicted RBP17.38■□□□□ 0.37
PRNP-201ENST00000379440 SMAP1Q8IYB5 467 aaPredicted RBP17.38■□□□□ 0.37
PRNP-201ENST00000379440 FAM84BQ96KN1 310 aaPredicted RBP17.38■□□□□ 0.37
PRNP-201ENST00000379440 GJB4Q9NTQ9 266 aa17.38■□□□□ 0.37
PRNP-201ENST00000379440 DACT1Q9NYF0 836 aa17.38■□□□□ 0.37
PRNP-201ENST00000379440 THSD7AQ9UPZ6 1657 aa17.38■□□□□ 0.37
PRNP-201ENST00000379440 CASZ1Q86V15 1759 aa17.38■□□□□ 0.37
PRNP-201ENST00000379440 CPLX1O14810 134 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms