RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 ANKRD36CQ5JPF3 1778 aa8.7□□□□□ -1.02
GPCPD1-201ENST00000379019 GOLGA6L22H0YM25 854 aa8.7□□□□□ -1.02
GPCPD1-201ENST00000379019 NKRFO15226 690 aaKnown RBP eCLIP8.7□□□□□ -1.02
GPCPD1-201ENST00000379019 A1BGP04217 495 aa8.7□□□□□ -1.02
GPCPD1-201ENST00000379019 SCRN1Q12765 414 aa8.7□□□□□ -1.02
GPCPD1-201ENST00000379019 TTLL5Q6EMB2 1281 aa8.7□□□□□ -1.02
GPCPD1-201ENST00000379019 FOXP4Q8IVH2 680 aaPredicted RBP8.7□□□□□ -1.02
GPCPD1-201ENST00000379019 VPS33BQ9H267 617 aa8.7□□□□□ -1.02
GPCPD1-201ENST00000379019 SLC27A2O14975 620 aa8.7□□□□□ -1.02
GPCPD1-201ENST00000379019 DPCR1Q3MIW9 517 aa8.7□□□□□ -1.02
GPCPD1-201ENST00000379019 ZNF592Q92610 1267 aa8.7□□□□□ -1.02
GPCPD1-201ENST00000379019 SUCLG2Q96I99 432 aa8.7□□□□□ -1.02
GPCPD1-201ENST00000379019 BOLA2Q9H3K6 86 aa8.7□□□□□ -1.02
GPCPD1-201ENST00000379019 TMEM232C9JQI7 657 aa8.69□□□□□ -1.02
GPCPD1-201ENST00000379019 TRIM66O15016 1216 aa8.69□□□□□ -1.02
GPCPD1-201ENST00000379019 ZNF75DP51815 510 aa8.69□□□□□ -1.02
GPCPD1-201ENST00000379019 CREB3L3Q68CJ9 461 aa8.69□□□□□ -1.02
GPCPD1-201ENST00000379019 COL4A1P02462 1669 aa8.69□□□□□ -1.02
GPCPD1-201ENST00000379019 PTCD1O75127 700 aaKnown RBP8.69□□□□□ -1.02
GPCPD1-201ENST00000379019 CYP21A2P08686 494 aa8.69□□□□□ -1.02
GPCPD1-201ENST00000379019 TERF2Q15554 542 aa8.69□□□□□ -1.02
GPCPD1-201ENST00000379019 LRRC8AQ8IWT6 810 aa8.69□□□□□ -1.02
GPCPD1-201ENST00000379019 ATF5Q9Y2D1 282 aaPredicted RBP8.69□□□□□ -1.02
GPCPD1-201ENST00000379019 PTPRCP08575 1304 aa8.69□□□□□ -1.02
GPCPD1-201ENST00000379019 ADAMTS3O15072 1205 aa8.69□□□□□ -1.02
GPCPD1-201ENST00000379019 GRIN1Q05586 938 aa8.69□□□□□ -1.02
GPCPD1-201ENST00000379019 BRIP1Q9BX63 1249 aa8.69□□□□□ -1.02
GPCPD1-201ENST00000379019 FHDC1Q9C0D6 1143 aaPredicted RBP8.69□□□□□ -1.02
GPCPD1-201ENST00000379019 LIMCH1Q9UPQ0 1083 aa8.69□□□□□ -1.02
GPCPD1-201ENST00000379019 MROH7-TTC4A0A0A0MT08 1334 aa8.69□□□□□ -1.02
GPCPD1-201ENST00000379019 SHISA4Q96DD7 197 aa8.68□□□□□ -1.02
GPCPD1-201ENST00000379019 USP28Q96RU2 1077 aa8.68□□□□□ -1.02
GPCPD1-201ENST00000379019 LTBP3Q9NS15 1303 aa8.68□□□□□ -1.02
GPCPD1-201ENST00000379019 ENGASEQ8NFI3 743 aa8.68□□□□□ -1.02
GPCPD1-201ENST00000379019 MAP3K15Q6ZN16 1313 aa8.68□□□□□ -1.02
GPCPD1-201ENST00000379019 KIF28PB7ZC32 967 aa8.68□□□□□ -1.02
GPCPD1-201ENST00000379019 COBLO75128 1261 aa8.68□□□□□ -1.02
GPCPD1-201ENST00000379019 RESTQ13127 1097 aa8.68□□□□□ -1.02
GPCPD1-201ENST00000379019 NCAPHQ15003 741 aa8.68□□□□□ -1.02
GPCPD1-201ENST00000379019 KCNB2Q92953 911 aa8.68□□□□□ -1.02
GPCPD1-201ENST00000379019 MYH14Q7Z406 1995 aaKnown RBP8.68□□□□□ -1.02
GPCPD1-201ENST00000379019 LAMB2P55268 1798 aa8.68□□□□□ -1.02
GPCPD1-201ENST00000379019 POLRMTO00411 1230 aaKnown RBP8.68□□□□□ -1.02
GPCPD1-201ENST00000379019 SLC39A6Q13433 755 aa8.68□□□□□ -1.02
GPCPD1-201ENST00000379019 WWC2Q6AWC2 1192 aa8.68□□□□□ -1.02
GPCPD1-201ENST00000379019 NEK11Q8NG66 645 aa8.68□□□□□ -1.02
GPCPD1-201ENST00000379019 DDX21Q9NR30 783 aaKnown RBP eCLIP8.68□□□□□ -1.02
GPCPD1-201ENST00000379019 DBF4Q9UBU7 674 aaPredicted RBP8.68□□□□□ -1.02
GPCPD1-201ENST00000379019 CAMTA2O94983 1202 aa8.67□□□□□ -1.02
GPCPD1-201ENST00000379019 DDX58O95786 925 aaKnown RBP8.67□□□□□ -1.02
GPCPD1-201ENST00000379019 MMP10P09238 476 aa8.67□□□□□ -1.02
GPCPD1-201ENST00000379019 TNNT1P13805 278 aa8.67□□□□□ -1.02
GPCPD1-201ENST00000379019 PI16Q6UXB8 463 aa8.67□□□□□ -1.02
GPCPD1-201ENST00000379019 DZIP3Q86Y13 1208 aaKnown RBP8.67□□□□□ -1.02
GPCPD1-201ENST00000379019 MAP4K1Q92918 833 aa8.67□□□□□ -1.02
GPCPD1-201ENST00000379019 WDFY3Q8IZQ1 3526 aa8.67□□□□□ -1.02
GPCPD1-201ENST00000379019 RAB11FIP3O75154 756 aa8.67□□□□□ -1.02
GPCPD1-201ENST00000379019 TRIM65Q6PJ69 517 aa8.67□□□□□ -1.02
GPCPD1-201ENST00000379019 LRP10Q7Z4F1 713 aa8.67□□□□□ -1.02
GPCPD1-201ENST00000379019 FILIP1Q7Z7B0 1213 aa8.67□□□□□ -1.02
GPCPD1-201ENST00000379019 CNKSR1Q969H4 720 aa8.67□□□□□ -1.02
GPCPD1-201ENST00000379019 SETDB2Q96T68 719 aa8.67□□□□□ -1.02
GPCPD1-201ENST00000379019 BICC1Q9H694 974 aaKnown RBP8.67□□□□□ -1.02
GPCPD1-201ENST00000379019 MBD3O95983 291 aa8.67□□□□□ -1.02
GPCPD1-201ENST00000379019 MCM5P33992 734 aa8.67□□□□□ -1.02
GPCPD1-201ENST00000379019 BRCA1P38398 1863 aaKnown RBP8.67□□□□□ -1.02
GPCPD1-201ENST00000379019 CCDC30Q5VVM6 783 aa8.67□□□□□ -1.02
GPCPD1-201ENST00000379019 ZBTB1Q9Y2K1 713 aa8.67□□□□□ -1.02
GPCPD1-201ENST00000379019 KLRG2A4D1S0 409 aaPredicted RBP8.67□□□□□ -1.02
GPCPD1-201ENST00000379019 WDR33Q9C0J8 1336 aaKnown RBP8.67□□□□□ -1.02
GPCPD1-201ENST00000379019 CHD4Q14839 1912 aa8.67□□□□□ -1.02
GPCPD1-201ENST00000379019 REXO1L1PQ8IX06 675 aa8.67□□□□□ -1.02
GPCPD1-201ENST00000379019 DBNLQ9UJU6 430 aaKnown RBP8.67□□□□□ -1.02
GPCPD1-201ENST00000379019 TFR2Q9UP52 801 aa8.67□□□□□ -1.02
GPCPD1-201ENST00000379019 BIN1O00499 593 aa8.66□□□□□ -1.02
GPCPD1-201ENST00000379019 WNT7AO00755 349 aa8.66□□□□□ -1.02
GPCPD1-201ENST00000379019 N4BP1O75113 896 aaKnown RBP8.66□□□□□ -1.02
GPCPD1-201ENST00000379019 TRIM28Q13263 835 aaKnown RBP8.66□□□□□ -1.02
GPCPD1-201ENST00000379019 MTF1Q14872 753 aa8.66□□□□□ -1.02
GPCPD1-201ENST00000379019 CCDC93Q567U6 631 aa8.66□□□□□ -1.02
GPCPD1-201ENST00000379019 CHADLQ6NUI6 762 aa8.66□□□□□ -1.02
GPCPD1-201ENST00000379019 TPTE2Q6XPS3 522 aa8.66□□□□□ -1.02
GPCPD1-201ENST00000379019 PIM2Q9P1W9 311 aa8.66□□□□□ -1.02
GPCPD1-201ENST00000379019 MORC2Q9Y6X9 1032 aaPredicted RBP8.66□□□□□ -1.02
GPCPD1-201ENST00000379019 MED23Q9ULK4 1368 aa8.66□□□□□ -1.02
GPCPD1-201ENST00000379019 TMEM139Q8IV31 216 aa8.66□□□□□ -1.02
GPCPD1-201ENST00000379019 STK11IPQ8N1F8 1099 aa8.66□□□□□ -1.02
GPCPD1-201ENST00000379019 CCDC171Q6TFL3 1326 aa8.66□□□□□ -1.02
GPCPD1-201ENST00000379019 PHF14O94880 888 aa8.66□□□□□ -1.02
GPCPD1-201ENST00000379019 CCT2P78371 535 aaKnown RBP8.66□□□□□ -1.02
GPCPD1-201ENST00000379019 PDE4BQ07343 736 aa8.66□□□□□ -1.02
GPCPD1-201ENST00000379019 BRF1Q92994 677 aa8.66□□□□□ -1.02
GPCPD1-201ENST00000379019 A0A1B0GVL5 298 aa8.66□□□□□ -1.02
GPCPD1-201ENST00000379019 RNF225M0QZC1 329 aaPredicted RBP8.66□□□□□ -1.02
GPCPD1-201ENST00000379019 EVX2Q03828 476 aa8.66□□□□□ -1.02
GPCPD1-201ENST00000379019 PRIMPOLQ96LW4 560 aa8.66□□□□□ -1.02
GPCPD1-201ENST00000379019 PDRG1Q9NUG6 133 aa8.65□□□□□ -1.02
GPCPD1-201ENST00000379019 H3BQF6 201 aa8.65□□□□□ -1.02
GPCPD1-201ENST00000379019 CLCN6P51797 869 aa8.65□□□□□ -1.02
GPCPD1-201ENST00000379019 WDR24Q96S15 920 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms