RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 CNBD1Q8NA66 436 aa13.55□□□□□ -0.24
PCDHA9-201ENST00000378122 ZBTB40Q9NUA8 1239 aa13.55□□□□□ -0.24
PCDHA9-201ENST00000378122 CTTNBP2Q8WZ74 1663 aa13.55□□□□□ -0.24
PCDHA9-201ENST00000378122 SMIM23A6NLE4 172 aa13.55□□□□□ -0.24
PCDHA9-201ENST00000378122 GJC1P36383 396 aa13.55□□□□□ -0.24
PCDHA9-201ENST00000378122 CCDC6Q16204 474 aa13.55□□□□□ -0.24
PCDHA9-201ENST00000378122 ZNF772Q68DY9 489 aaPredicted RBP13.55□□□□□ -0.24
PCDHA9-201ENST00000378122 ZMYM4Q5VZL5 1548 aa13.55□□□□□ -0.24
PCDHA9-201ENST00000378122 NIM1KQ8IY84 436 aa13.55□□□□□ -0.24
PCDHA9-201ENST00000378122 C17orf53Q8N3J3 647 aaPredicted RBP13.55□□□□□ -0.24
PCDHA9-201ENST00000378122 ANKS4BQ8N8V4 417 aa13.55□□□□□ -0.24
PCDHA9-201ENST00000378122 IFT81Q8WYA0 676 aa13.55□□□□□ -0.24
PCDHA9-201ENST00000378122 GRIN2AQ12879 1464 aa13.55□□□□□ -0.24
PCDHA9-201ENST00000378122 KRT83P78385 493 aa13.54□□□□□ -0.24
PCDHA9-201ENST00000378122 PPP2R3AQ06190 1150 aa13.54□□□□□ -0.24
PCDHA9-201ENST00000378122 KRT24Q2M2I5 525 aa13.54□□□□□ -0.24
PCDHA9-201ENST00000378122 HDXQ7Z353 690 aa13.54□□□□□ -0.24
PCDHA9-201ENST00000378122 ZEB2O60315 1214 aa13.54□□□□□ -0.24
PCDHA9-201ENST00000378122 ZFYP08048 801 aaPredicted RBP13.54□□□□□ -0.24
PCDHA9-201ENST00000378122 TTC41PQ6P2S7 1318 aa13.54□□□□□ -0.24
PCDHA9-201ENST00000378122 PABPN1LA6NDY0 278 aaKnown RBP13.54□□□□□ -0.24
PCDHA9-201ENST00000378122 COPS6Q7L5N1 327 aa13.54□□□□□ -0.24
PCDHA9-201ENST00000378122 RASSF4Q9H2L5 321 aa13.54□□□□□ -0.24
PCDHA9-201ENST00000378122 H7C1D1 291 aa13.54□□□□□ -0.24
PCDHA9-201ENST00000378122 EBAG9O00559 213 aa13.54□□□□□ -0.24
PCDHA9-201ENST00000378122 MCM7P33993 719 aa13.54□□□□□ -0.24
PCDHA9-201ENST00000378122 TFCP2Q12800 502 aa13.54□□□□□ -0.24
PCDHA9-201ENST00000378122 FBF1Q8TES7 1133 aa13.54□□□□□ -0.24
PCDHA9-201ENST00000378122 EYA3Q99504 573 aa13.54□□□□□ -0.24
PCDHA9-201ENST00000378122 SPAG5Q96R06 1193 aa13.54□□□□□ -0.24
PCDHA9-201ENST00000378122 CTNND2Q9UQB3 1225 aa13.54□□□□□ -0.24
PCDHA9-201ENST00000378122 POLR3AO14802 1390 aaPredicted RBP13.54□□□□□ -0.24
PCDHA9-201ENST00000378122 PSMA7O14818 248 aa13.53□□□□□ -0.24
PCDHA9-201ENST00000378122 BMP15O95972 392 aa13.53□□□□□ -0.24
PCDHA9-201ENST00000378122 PPP1R14CQ8TAE6 165 aa13.53□□□□□ -0.24
PCDHA9-201ENST00000378122 IKBKGQ9Y6K9 419 aa13.53□□□□□ -0.24
PCDHA9-201ENST00000378122 NCBP1Q09161 790 aaKnown RBP13.53□□□□□ -0.24
PCDHA9-201ENST00000378122 ESR2Q92731 530 aa13.53□□□□□ -0.24
PCDHA9-201ENST00000378122 PLIN2Q99541 437 aa13.53□□□□□ -0.24
PCDHA9-201ENST00000378122 GSTO1P78417 241 aa13.53□□□□□ -0.24
PCDHA9-201ENST00000378122 KDM5BQ9UGL1 1544 aa13.53□□□□□ -0.24
PCDHA9-201ENST00000378122 A0A1B0GVL5 298 aa13.53□□□□□ -0.24
PCDHA9-201ENST00000378122 RNF113AO15541 343 aaKnown RBP13.53□□□□□ -0.24
PCDHA9-201ENST00000378122 SPAG1Q07617 926 aa13.53□□□□□ -0.24
PCDHA9-201ENST00000378122 EIF4A2Q14240 407 aaKnown RBP13.53□□□□□ -0.24
PCDHA9-201ENST00000378122 SLC9C2Q5TAH2 1124 aa13.53□□□□□ -0.24
PCDHA9-201ENST00000378122 KRT86O43790 486 aa13.53□□□□□ -0.24
PCDHA9-201ENST00000378122 CCDC172P0C7W6 258 aa13.53□□□□□ -0.24
PCDHA9-201ENST00000378122 MXRA7P84157 204 aa13.53□□□□□ -0.24
PCDHA9-201ENST00000378122 MRVI1Q9Y6F6 885 aa13.53□□□□□ -0.24
PCDHA9-201ENST00000378122 VAMP4O75379 141 aa13.53□□□□□ -0.24
PCDHA9-201ENST00000378122 NBPF7P0C2Y1 421 aaPredicted RBP13.53□□□□□ -0.24
PCDHA9-201ENST00000378122 KIF5AQ12840 1032 aa13.53□□□□□ -0.24
PCDHA9-201ENST00000378122 MTHFSDQ2M296 383 aaKnown RBP13.53□□□□□ -0.24
PCDHA9-201ENST00000378122 FAM76AQ8TAV0 307 aa13.53□□□□□ -0.24
PCDHA9-201ENST00000378122 INTS4Q96HW7 963 aaKnown RBP13.53□□□□□ -0.24
PCDHA9-201ENST00000378122 LMBR1LQ6UX01 489 aa13.52□□□□□ -0.24
PCDHA9-201ENST00000378122 TTC21AQ8NDW8 1320 aa13.52□□□□□ -0.24
PCDHA9-201ENST00000378122 UHRF1BP1Q6BDS2 1440 aa13.52□□□□□ -0.24
PCDHA9-201ENST00000378122 FANCAO15360 1455 aa13.52□□□□□ -0.24
PCDHA9-201ENST00000378122 NAPAP54920 295 aa13.52□□□□□ -0.24
PCDHA9-201ENST00000378122 EVCP57679 992 aa13.52□□□□□ -0.24
PCDHA9-201ENST00000378122 KSR2Q6VAB6 950 aa13.52□□□□□ -0.24
PCDHA9-201ENST00000378122 CFAP43Q8NDM7 1665 aa13.52□□□□□ -0.24
PCDHA9-201ENST00000378122 ERO1AQ96HE7 468 aa13.52□□□□□ -0.24
PCDHA9-201ENST00000378122 PSDA5PKW4 1024 aaPredicted RBP13.52□□□□□ -0.25
PCDHA9-201ENST00000378122 TMTC2Q8N394 836 aa13.52□□□□□ -0.25
PCDHA9-201ENST00000378122 NOP9Q86U38 636 aaKnown RBP13.52□□□□□ -0.25
PCDHA9-201ENST00000378122 BAG1Q99933 345 aaPredicted RBP13.52□□□□□ -0.25
PCDHA9-201ENST00000378122 GPATCH8Q9UKJ3 1502 aaKnown RBP13.52□□□□□ -0.25
PCDHA9-201ENST00000378122 CWF19L2Q2TBE0 894 aaKnown RBP13.51□□□□□ -0.25
PCDHA9-201ENST00000378122 PPM1EQ8WY54 764 aa13.51□□□□□ -0.25
PCDHA9-201ENST00000378122 DUOX2Q9NRD8 1548 aa13.51□□□□□ -0.25
PCDHA9-201ENST00000378122 A0A1B0GUL7 405 aa13.51□□□□□ -0.25
PCDHA9-201ENST00000378122 ALDH1L1O75891 902 aa13.51□□□□□ -0.25
PCDHA9-201ENST00000378122 CCDC174Q6PII3 467 aa13.51□□□□□ -0.25
PCDHA9-201ENST00000378122 SYNCQ9H7C4 482 aa13.51□□□□□ -0.25
PCDHA9-201ENST00000378122 RTL9Q8NET4 1388 aa13.51□□□□□ -0.25
PCDHA9-201ENST00000378122 MAGEB6P1A0A0J9YX57 407 aa13.51□□□□□ -0.25
PCDHA9-201ENST00000378122 SPATA24Q86W54 205 aa13.51□□□□□ -0.25
PCDHA9-201ENST00000378122 MYRIPQ8NFW9 859 aa13.51□□□□□ -0.25
PCDHA9-201ENST00000378122 DCPSQ96C86 337 aaKnown RBP13.51□□□□□ -0.25
PCDHA9-201ENST00000378122 SAP30BPQ9UHR5 308 aaKnown RBP13.51□□□□□ -0.25
PCDHA9-201ENST00000378122 UFL1O94874 794 aa13.51□□□□□ -0.25
PCDHA9-201ENST00000378122 CCT6AP40227 531 aaKnown RBP13.51□□□□□ -0.25
PCDHA9-201ENST00000378122 GSTA5Q7RTV2 222 aa13.51□□□□□ -0.25
PCDHA9-201ENST00000378122 HELBQ8NG08 1087 aaPredicted RBP13.51□□□□□ -0.25
PCDHA9-201ENST00000378122 CCDC114Q96M63 670 aa13.51□□□□□ -0.25
PCDHA9-201ENST00000378122 PAGR1Q9BTK6 254 aa13.51□□□□□ -0.25
PCDHA9-201ENST00000378122 C19orf44Q9H6X5 657 aa13.51□□□□□ -0.25
PCDHA9-201ENST00000378122 TRIM75PA6NK02 468 aa13.51□□□□□ -0.25
PCDHA9-201ENST00000378122 ZBTB24O43167 697 aaPredicted RBP13.51□□□□□ -0.25
PCDHA9-201ENST00000378122 ERMNQ8TAM6 284 aa13.51□□□□□ -0.25
PCDHA9-201ENST00000378122 ABCC1P33527 1531 aa13.51□□□□□ -0.25
PCDHA9-201ENST00000378122 MAGEB6Q8N7X4 407 aa13.5□□□□□ -0.25
PCDHA9-201ENST00000378122 NEK11Q8NG66 645 aa13.5□□□□□ -0.25
PCDHA9-201ENST00000378122 NUP160Q12769 1436 aa13.5□□□□□ -0.25
PCDHA9-201ENST00000378122 CCDC42Q96M95 316 aa13.5□□□□□ -0.25
PCDHA9-201ENST00000378122 TCHPQ9BT92 498 aa13.5□□□□□ -0.25
PCDHA9-201ENST00000378122 STMN4Q9H169 189 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms