RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 CCDC158Q5M9N0 1113 aa16.06■□□□□ 0.16
SF1-205ENST00000377394 TTC39AQ5SRH9 613 aa16.06■□□□□ 0.16
SF1-205ENST00000377394 MB21D2Q8IYB1 491 aaPredicted RBP16.06■□□□□ 0.16
SF1-205ENST00000377394 ANO10Q9NW15 660 aa16.06■□□□□ 0.16
SF1-205ENST00000377394 HPS5Q9UPZ3 1129 aa16.06■□□□□ 0.16
SF1-205ENST00000377394 PLA2G4AP47712 749 aa16.06■□□□□ 0.16
SF1-205ENST00000377394 CCDC57Q2TAC2 916 aa16.06■□□□□ 0.16
SF1-205ENST00000377394 ADALQ6DHV7 355 aa16.06■□□□□ 0.16
SF1-205ENST00000377394 OTUD7BQ6GQQ9 843 aa16.06■□□□□ 0.16
SF1-205ENST00000377394 CADPS2Q86UW7 1296 aa16.06■□□□□ 0.16
SF1-205ENST00000377394 ZFYP08048 801 aaPredicted RBP16.05■□□□□ 0.16
SF1-205ENST00000377394 CLCN6P51797 869 aa16.05■□□□□ 0.16
SF1-205ENST00000377394 TCIRG1Q13488 830 aa16.05■□□□□ 0.16
SF1-205ENST00000377394 BMS1Q14692 1282 aaKnown RBP16.05■□□□□ 0.16
SF1-205ENST00000377394 IMMTQ16891 758 aaKnown RBP16.05■□□□□ 0.16
SF1-205ENST00000377394 FILIP1Q7Z7B0 1213 aa16.05■□□□□ 0.16
SF1-205ENST00000377394 MRPS27Q92552 414 aaKnown RBP16.05■□□□□ 0.16
SF1-205ENST00000377394 FBXO3Q9UK99 471 aa16.05■□□□□ 0.16
SF1-205ENST00000377394 A0A1W2PQ27 194 aa16.05■□□□□ 0.16
SF1-205ENST00000377394 A0A1W2PQ64 194 aa16.05■□□□□ 0.16
SF1-205ENST00000377394 A0A1W2PQD8 194 aa16.05■□□□□ 0.16
SF1-205ENST00000377394 ANTXR2P58335 489 aa16.05■□□□□ 0.16
SF1-205ENST00000377394 WASHC4Q2M389 1173 aa16.05■□□□□ 0.16
SF1-205ENST00000377394 LRRFIP1Q32MZ4 808 aaKnown RBP16.05■□□□□ 0.16
SF1-205ENST00000377394 TOM1L2Q6ZVM7 507 aa16.05■□□□□ 0.16
SF1-205ENST00000377394 LINC00301Q8NCQ3 95 aa16.05■□□□□ 0.16
SF1-205ENST00000377394 ERCC4Q92889 916 aaPredicted RBP16.05■□□□□ 0.16
SF1-205ENST00000377394 PUS7LQ9H0K6 701 aaKnown RBP16.05■□□□□ 0.16
SF1-205ENST00000377394 AKAP2Q9Y2D5 859 aa16.05■□□□□ 0.16
SF1-205ENST00000377394 PRC1O43663 620 aa16.05■□□□□ 0.16
SF1-205ENST00000377394 H2AFXP16104 143 aaPredicted RBP16.05■□□□□ 0.16
SF1-205ENST00000377394 TMX1Q9H3N1 280 aa16.05■□□□□ 0.16
SF1-205ENST00000377394 PNMA6AP0CW24 399 aaPredicted RBP16.04■□□□□ 0.16
SF1-205ENST00000377394 ZAP70P43403 619 aa16.04■□□□□ 0.16
SF1-205ENST00000377394 GORABQ5T7V8 394 aa16.04■□□□□ 0.16
SF1-205ENST00000377394 CLIC4Q9Y696 253 aa16.04■□□□□ 0.16
SF1-205ENST00000377394 A0A1B0GVL5 298 aa16.04■□□□□ 0.16
SF1-205ENST00000377394 BECN2A8MW95 431 aa16.04■□□□□ 0.16
SF1-205ENST00000377394 TRIM28Q13263 835 aaKnown RBP16.04■□□□□ 0.16
SF1-205ENST00000377394 FBXO18Q8NFZ0 1043 aa16.04■□□□□ 0.16
SF1-205ENST00000377394 APPBP2Q92624 585 aa16.04■□□□□ 0.16
SF1-205ENST00000377394 NEDD4P46934 1319 aa16.03■□□□□ 0.16
SF1-205ENST00000377394 KLF18A0A0U1RQI7 1052 aa16.03■□□□□ 0.16
SF1-205ENST00000377394 CCDC69A6NI79 296 aa16.03■□□□□ 0.16
SF1-205ENST00000377394 CSF1RP07333 972 aa16.03■□□□□ 0.16
SF1-205ENST00000377394 NDUFA8P51970 172 aa16.03■□□□□ 0.16
SF1-205ENST00000377394 HSP90AB3PQ58FF7 597 aa16.03■□□□□ 0.16
SF1-205ENST00000377394 C8orf76Q96K31 380 aa16.03■□□□□ 0.16
SF1-205ENST00000377394 PLA2G12BQ9BX93 195 aa16.03■□□□□ 0.16
SF1-205ENST00000377394 RSPH14Q9UHP6 348 aa16.03■□□□□ 0.16
SF1-205ENST00000377394 ST5P78524 1137 aa16.03■□□□□ 0.16
SF1-205ENST00000377394 CCZ1BP86790 482 aa16.03■□□□□ 0.16
SF1-205ENST00000377394 CCZ1P86791 482 aaPredicted RBP16.03■□□□□ 0.16
SF1-205ENST00000377394 PI16Q6UXB8 463 aa16.03■□□□□ 0.16
SF1-205ENST00000377394 CEP57L1Q8IYX8 460 aa16.03■□□□□ 0.16
SF1-205ENST00000377394 CCAR2Q8N163 923 aaKnown RBP16.03■□□□□ 0.16
SF1-205ENST00000377394 CCDC85AQ96PX6 553 aaPredicted RBP16.03■□□□□ 0.16
SF1-205ENST00000377394 POLR3EQ9NVU0 708 aa16.03■□□□□ 0.16
SF1-205ENST00000377394 GOLGA8BA8MQT2 603 aa16.02■□□□□ 0.16
SF1-205ENST00000377394 TRIM66O15016 1216 aa16.02■□□□□ 0.16
SF1-205ENST00000377394 NEMFO60524 1076 aa16.02■□□□□ 0.16
SF1-205ENST00000377394 POLR3DP05423 398 aaPredicted RBP16.02■□□□□ 0.16
SF1-205ENST00000377394 SYT10Q6XYQ8 523 aa16.02■□□□□ 0.16
SF1-205ENST00000377394 FAM89AQ96GI7 184 aa16.02■□□□□ 0.16
SF1-205ENST00000377394 PRDM11Q9NQV5 511 aa16.02■□□□□ 0.16
SF1-205ENST00000377394 DDX60Q8IY21 1712 aaKnown RBP16.02■□□□□ 0.16
SF1-205ENST00000377394 ABCC12Q96J65 1359 aa16.02■□□□□ 0.16
SF1-205ENST00000377394 DHX16O60231 1041 aaKnown RBP16.02■□□□□ 0.15
SF1-205ENST00000377394 PCCAP05165 728 aaPredicted RBP16.02■□□□□ 0.15
SF1-205ENST00000377394 AOPEPQ8N6M6 819 aa16.02■□□□□ 0.15
SF1-205ENST00000377394 ZCCHC17Q9NP64 241 aaKnown RBP16.02■□□□□ 0.15
SF1-205ENST00000377394 GJB4Q9NTQ9 266 aa16.02■□□□□ 0.15
SF1-205ENST00000377394 ORC3Q9UBD5 711 aaPredicted RBP16.02■□□□□ 0.15
SF1-205ENST00000377394 LCMT1Q9UIC8 334 aa16.02■□□□□ 0.15
SF1-205ENST00000377394 COL5A2P05997 1499 aaPredicted RBP16.02■□□□□ 0.15
SF1-205ENST00000377394 YEATS4O95619 227 aa16.01■□□□□ 0.15
SF1-205ENST00000377394 STK38Q15208 465 aa16.01■□□□□ 0.15
SF1-205ENST00000377394 MYSM1Q5VVJ2 828 aa16.01■□□□□ 0.15
SF1-205ENST00000377394 NCOA7Q8NI08 942 aa16.01■□□□□ 0.15
SF1-205ENST00000377394 KCNG4Q8TDN1 519 aa16.01■□□□□ 0.15
SF1-205ENST00000377394 RIC1Q4ADV7 1423 aa16.01■□□□□ 0.15
SF1-205ENST00000377394 KIF28PB7ZC32 967 aa16.01■□□□□ 0.15
SF1-205ENST00000377394 GPAA1O43292 621 aa16.01■□□□□ 0.15
SF1-205ENST00000377394 IL2RBP14784 551 aa16.01■□□□□ 0.15
SF1-205ENST00000377394 TNNT3P45378 269 aaPredicted RBP16.01■□□□□ 0.15
SF1-205ENST00000377394 RAB11FIP4Q86YS3 637 aa16.01■□□□□ 0.15
SF1-205ENST00000377394 SDF4Q9BRK5 362 aa16.01■□□□□ 0.15
SF1-205ENST00000377394 TSPYL1Q9H0U9 437 aa16.01■□□□□ 0.15
SF1-205ENST00000377394 SHANK3Q9BYB0 1731 aa16.01■□□□□ 0.15
SF1-205ENST00000377394 WDR19Q8NEZ3 1342 aa16.01■□□□□ 0.15
SF1-205ENST00000377394 KRBA2Q6ZNG9 492 aa16.01■□□□□ 0.15
SF1-205ENST00000377394 BRAPQ7Z569 592 aa16.01■□□□□ 0.15
SF1-205ENST00000377394 NBPF3Q9H094 633 aa16.01■□□□□ 0.15
SF1-205ENST00000377394 NAT10Q9H0A0 1025 aaKnown RBP16.01■□□□□ 0.15
SF1-205ENST00000377394 KIAA1468Q9P260 1216 aa16.01■□□□□ 0.15
SF1-205ENST00000377394 SPTLC2O15270 562 aa16■□□□□ 0.15
SF1-205ENST00000377394 FAM193AP78312 1265 aa16■□□□□ 0.15
SF1-205ENST00000377394 IFIT5Q13325 482 aaKnown RBP16■□□□□ 0.15
SF1-205ENST00000377394 ARHGAP29Q52LW3 1261 aa16■□□□□ 0.15
SF1-205ENST00000377394 ZBTB38Q8NAP3 1195 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms