RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 TMX1Q9H3N1 280 aa22.2■■□□□ 1.14
TGFBR1-201ENST00000374990 ZSWIM4Q9H7M6 989 aa22.2■■□□□ 1.14
TGFBR1-201ENST00000374990 IGSF1Q8N6C5 1336 aa22.2■■□□□ 1.14
TGFBR1-201ENST00000374990 CEP112Q8N8E3 955 aa22.2■■□□□ 1.14
TGFBR1-201ENST00000374990 EAF2Q96CJ1 260 aaPredicted RBP22.2■■□□□ 1.14
TGFBR1-201ENST00000374990 BICDL2A1A5D9 508 aa22.2■■□□□ 1.14
TGFBR1-201ENST00000374990 B4E1Z4 1266 aa22.2■■□□□ 1.14
TGFBR1-201ENST00000374990 LPIN2Q92539 896 aa22.19■■□□□ 1.14
TGFBR1-201ENST00000374990 MATR3P43243 847 aaKnown RBP eCLIP22.19■■□□□ 1.145e-6■■□□□ 12.5
TGFBR1-201ENST00000374990 PRDM10Q9NQV6 1147 aa22.19■■□□□ 1.14
TGFBR1-201ENST00000374990 ZRSR2Q15696 482 aaKnown RBP22.19■■□□□ 1.14
TGFBR1-201ENST00000374990 KRT79Q5XKE5 535 aa22.19■■□□□ 1.14
TGFBR1-201ENST00000374990 PPP4R3AQ6IN85 833 aa22.19■■□□□ 1.14
TGFBR1-201ENST00000374990 DTHD1Q6ZMT9 781 aa22.19■■□□□ 1.14
TGFBR1-201ENST00000374990 KRT86O43790 486 aa22.19■■□□□ 1.14
TGFBR1-201ENST00000374990 HLTFQ14527 1009 aaKnown RBP eCLIP22.18■■□□□ 1.14
TGFBR1-201ENST00000374990 RRAGDQ9NQL2 400 aaPredicted RBP22.18■■□□□ 1.14
TGFBR1-201ENST00000374990 PPP1R2P41236 205 aa22.18■■□□□ 1.14
TGFBR1-201ENST00000374990 NOP2P46087 812 aaKnown RBP22.18■■□□□ 1.14
TGFBR1-201ENST00000374990 CNGA4Q8IV77 575 aa22.18■■□□□ 1.14
TGFBR1-201ENST00000374990 CNKSR2Q8WXI2 1034 aa22.18■■□□□ 1.14
TGFBR1-201ENST00000374990 TAOK3Q9H2K8 898 aa22.18■■□□□ 1.14
TGFBR1-201ENST00000374990 TMCO5BA8MYB1 307 aa22.18■■□□□ 1.14
TGFBR1-201ENST00000374990 SSR1P43307 286 aaKnown RBP22.18■■□□□ 1.14
TGFBR1-201ENST00000374990 FEZ1Q99689 392 aa22.18■■□□□ 1.14
TGFBR1-201ENST00000374990 ERVV-2B6SEH9 535 aa22.18■■□□□ 1.14
TGFBR1-201ENST00000374990 RXRAP19793 462 aa22.18■■□□□ 1.14
TGFBR1-201ENST00000374990 DNA2P51530 1060 aa22.18■■□□□ 1.14
TGFBR1-201ENST00000374990 TOM1O60784 492 aa22.17■■□□□ 1.14
TGFBR1-201ENST00000374990 CUTAO60888 179 aa22.17■■□□□ 1.14
TGFBR1-201ENST00000374990 IFFO1Q0D2I5 559 aa22.17■■□□□ 1.14
TGFBR1-201ENST00000374990 NCOA5Q9HCD5 579 aaKnown RBP22.17■■□□□ 1.14
TGFBR1-201ENST00000374990 ZSWIM6Q9HCJ5 1215 aa22.17■■□□□ 1.14
TGFBR1-201ENST00000374990 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.17■■□□□ 1.14
TGFBR1-201ENST00000374990 KCNH3Q9ULD8 1083 aa22.17■■□□□ 1.14
TGFBR1-201ENST00000374990 RTCBQ9Y3I0 505 aaKnown RBP22.17■■□□□ 1.14
TGFBR1-201ENST00000374990 TACC1O75410 805 aa22.17■■□□□ 1.14
TGFBR1-201ENST00000374990 FBXO3Q9UK99 471 aa22.17■■□□□ 1.14
TGFBR1-201ENST00000374990 METP08581 1390 aa22.17■■□□□ 1.14
TGFBR1-201ENST00000374990 CTAGE9A4FU28 777 aa22.17■■□□□ 1.14
TGFBR1-201ENST00000374990 LDHBP07195 334 aaKnown RBP22.17■■□□□ 1.14
TGFBR1-201ENST00000374990 KIF5AQ12840 1032 aa22.16■■□□□ 1.14
TGFBR1-201ENST00000374990 SLC4A8Q2Y0W8 1093 aa22.16■■□□□ 1.14
TGFBR1-201ENST00000374990 SPECC1Q5M775 1068 aa22.16■■□□□ 1.14
TGFBR1-201ENST00000374990 GTF3C6Q969F1 213 aa22.16■■□□□ 1.14
TGFBR1-201ENST00000374990 RRP36Q96EU6 259 aaKnown RBP22.16■■□□□ 1.14
TGFBR1-201ENST00000374990 GADD45BO75293 160 aaPredicted RBP22.16■■□□□ 1.14
TGFBR1-201ENST00000374990 SPDYE4A6NLX3 237 aa22.16■■□□□ 1.14
TGFBR1-201ENST00000374990 ME3Q16798 604 aa22.16■■□□□ 1.14
TGFBR1-201ENST00000374990 CTR9Q6PD62 1173 aa22.16■■□□□ 1.14
TGFBR1-201ENST00000374990 DIS3L2Q8IYB7 885 aaKnown RBP22.16■■□□□ 1.14
TGFBR1-201ENST00000374990 ZNF594Q96JF6 807 aaPredicted RBP22.16■■□□□ 1.14
TGFBR1-201ENST00000374990 COPRSQ9NQ92 184 aa22.16■■□□□ 1.14
TGFBR1-201ENST00000374990 PALD1Q9ULE6 856 aa22.16■■□□□ 1.14
TGFBR1-201ENST00000374990 CDC37L1Q7L3B6 337 aa22.15■■□□□ 1.14
TGFBR1-201ENST00000374990 MLKLQ8NB16 471 aa22.15■■□□□ 1.14
TGFBR1-201ENST00000374990 ZNF274Q96GC6 653 aaPredicted RBP22.15■■□□□ 1.14
TGFBR1-201ENST00000374990 CBX8Q9HC52 389 aa22.15■■□□□ 1.14
TGFBR1-201ENST00000374990 LUC7L2Q9Y383 392 aaKnown RBP22.15■■□□□ 1.14
TGFBR1-201ENST00000374990 TCIRG1Q13488 830 aa22.15■■□□□ 1.14
TGFBR1-201ENST00000374990 CCDC42Q96M95 316 aa22.15■■□□□ 1.14
TGFBR1-201ENST00000374990 ZC3H12CQ9C0D7 883 aaKnown RBP22.15■■□□□ 1.14
TGFBR1-201ENST00000374990 UGGT1Q9NYU2 1555 aa22.15■■□□□ 1.14
TGFBR1-201ENST00000374990 EFCAB6Q5THR3 1501 aa22.15■■□□□ 1.14
TGFBR1-201ENST00000374990 RGS12O14924 1447 aa22.15■■□□□ 1.14
TGFBR1-201ENST00000374990 MYO1BO43795 1136 aa22.15■■□□□ 1.14
TGFBR1-201ENST00000374990 PHF23Q9BUL5 403 aaPredicted RBP22.15■■□□□ 1.14
TGFBR1-201ENST00000374990 NSFL1CQ9UNZ2 370 aaKnown RBP22.15■■□□□ 1.14
TGFBR1-201ENST00000374990 GOLGA1Q92805 767 aa22.14■■□□□ 1.14
TGFBR1-201ENST00000374990 BTG4Q9NY30 223 aa22.14■■□□□ 1.14
TGFBR1-201ENST00000374990 ZNF75DP51815 510 aa22.14■■□□□ 1.13
TGFBR1-201ENST00000374990 SYCP3Q8IZU3 236 aa22.14■■□□□ 1.13
TGFBR1-201ENST00000374990 STX17P56962 302 aa22.14■■□□□ 1.13
TGFBR1-201ENST00000374990 PLEKHG1Q9ULL1 1385 aa22.14■■□□□ 1.13
TGFBR1-201ENST00000374990 GBP2P32456 591 aaPredicted RBP22.13■■□□□ 1.13
TGFBR1-201ENST00000374990 IMPACTQ9P2X3 320 aa22.13■■□□□ 1.13
TGFBR1-201ENST00000374990 DNAJC10Q8IXB1 793 aa22.13■■□□□ 1.13
TGFBR1-201ENST00000374990 PHKG2P15735 406 aa22.13■■□□□ 1.13
TGFBR1-201ENST00000374990 PPP1R9BQ96SB3 815 aa22.13■■□□□ 1.13
TGFBR1-201ENST00000374990 KCNQ3O43525 872 aa22.13■■□□□ 1.13
TGFBR1-201ENST00000374990 MTMR6Q9Y217 621 aa22.13■■□□□ 1.13
TGFBR1-201ENST00000374990 E7EWF7 191 aa22.12■■□□□ 1.13
TGFBR1-201ENST00000374990 MICALCLQ6ZW33 695 aa22.12■■□□□ 1.13
TGFBR1-201ENST00000374990 TTC6Q86TZ1 520 aa22.12■■□□□ 1.13
TGFBR1-201ENST00000374990 DYDC1Q8WWB3 177 aa22.12■■□□□ 1.13
TGFBR1-201ENST00000374990 GTF2F1P35269 517 aaKnown RBP eCLIP22.12■■□□□ 1.136e-9■■■□□ 15
TGFBR1-201ENST00000374990 BAG1Q99933 345 aaPredicted RBP22.12■■□□□ 1.13
TGFBR1-201ENST00000374990 ZNF202O95125 648 aa22.12■■□□□ 1.13
TGFBR1-201ENST00000374990 PLCD1P51178 756 aa22.12■■□□□ 1.13
TGFBR1-201ENST00000374990 CERS3Q8IU89 383 aa22.12■■□□□ 1.13
TGFBR1-201ENST00000374990 MROH5Q6ZUA9 1318 aa22.12■■□□□ 1.13
TGFBR1-201ENST00000374990 JAK2O60674 1132 aa22.12■■□□□ 1.13
TGFBR1-201ENST00000374990 MCM7P33993 719 aa22.12■■□□□ 1.13
TGFBR1-201ENST00000374990 GSTTP1A0A1W2PQM5 241 aa22.11■■□□□ 1.13
TGFBR1-201ENST00000374990 KRT40Q6A162 431 aa22.11■■□□□ 1.13
TGFBR1-201ENST00000374990 SYT10Q6XYQ8 523 aa22.11■■□□□ 1.13
TGFBR1-201ENST00000374990 MMRN2Q9H8L6 949 aa22.11■■□□□ 1.13
TGFBR1-201ENST00000374990 USP37Q86T82 979 aa22.11■■□□□ 1.13
TGFBR1-201ENST00000374990 ERO1AQ96HE7 468 aa22.11■■□□□ 1.13
TGFBR1-201ENST00000374990 PLVAPQ9BX97 442 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms