RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 CYP7A1P22680 504 aa7.16□□□□□ -1.26
PTPN3-202ENST00000374541 BCAMP50895 628 aa7.16□□□□□ -1.26
PTPN3-202ENST00000374541 MFSD14CQ5VZR4 134 aa7.16□□□□□ -1.26
PTPN3-202ENST00000374541 STXBP4Q6ZWJ1 553 aa7.16□□□□□ -1.26
PTPN3-202ENST00000374541 TTC6Q86TZ1 520 aa7.16□□□□□ -1.26
PTPN3-202ENST00000374541 IQCA1Q86XH1 822 aa7.16□□□□□ -1.26
PTPN3-202ENST00000374541 TEX11Q8IYF3 940 aa7.16□□□□□ -1.26
PTPN3-202ENST00000374541 KRT222Q8N1A0 295 aa7.16□□□□□ -1.26
PTPN3-202ENST00000374541 SLC52A2Q9HAB3 445 aa7.16□□□□□ -1.26
PTPN3-202ENST00000374541 ADAMTS8Q9UP79 889 aa7.16□□□□□ -1.26
PTPN3-202ENST00000374541 RAD50Q92878 1312 aa7.16□□□□□ -1.26
PTPN3-202ENST00000374541 CTCFP49711 727 aaPredicted RBP7.16□□□□□ -1.26
PTPN3-202ENST00000374541 BIRC2Q13490 618 aa7.16□□□□□ -1.26
PTPN3-202ENST00000374541 TTF1Q15361 905 aaPredicted RBP7.16□□□□□ -1.26
PTPN3-202ENST00000374541 CCDC155Q8N6L0 562 aa7.16□□□□□ -1.26
PTPN3-202ENST00000374541 FBF1Q8TES7 1133 aa7.16□□□□□ -1.26
PTPN3-202ENST00000374541 LRRC45Q96CN5 670 aa7.16□□□□□ -1.26
PTPN3-202ENST00000374541 HTATIP2Q9BUP3 242 aa7.16□□□□□ -1.26
PTPN3-202ENST00000374541 GINS2Q9Y248 185 aa7.16□□□□□ -1.26
PTPN3-202ENST00000374541 TNS3Q68CZ2 1445 aa7.16□□□□□ -1.26
PTPN3-202ENST00000374541 EPHX2P34913 555 aa7.16□□□□□ -1.26
PTPN3-202ENST00000374541 PRPHP41219 470 aa7.16□□□□□ -1.26
PTPN3-202ENST00000374541 STX1AQ16623 288 aa7.16□□□□□ -1.26
PTPN3-202ENST00000374541 DDX23Q9BUQ8 820 aaKnown RBP7.16□□□□□ -1.26
PTPN3-202ENST00000374541 LRFN2Q9ULH4 789 aa7.16□□□□□ -1.26
PTPN3-202ENST00000374541 KBTBD13C9JR72 458 aa7.16□□□□□ -1.26
PTPN3-202ENST00000374541 TNPO2O14787 897 aaKnown RBP7.16□□□□□ -1.26
PTPN3-202ENST00000374541 RPS6KA4O75676 772 aa7.16□□□□□ -1.26
PTPN3-202ENST00000374541 RPS8P62241 208 aaKnown RBP7.16□□□□□ -1.26
PTPN3-202ENST00000374541 TBC1D22AQ8WUA7 517 aa7.16□□□□□ -1.26
PTPN3-202ENST00000374541 EYA1Q99502 592 aa7.16□□□□□ -1.26
PTPN3-202ENST00000374541 SYCE3A1L190 88 aa7.16□□□□□ -1.26
PTPN3-202ENST00000374541 KIF4AO95239 1232 aa7.16□□□□□ -1.26
PTPN3-202ENST00000374541 AMPD3Q01432 767 aa7.16□□□□□ -1.26
PTPN3-202ENST00000374541 SP4Q02446 784 aa7.16□□□□□ -1.26
PTPN3-202ENST00000374541 STK3Q13188 491 aa7.16□□□□□ -1.26
PTPN3-202ENST00000374541 APOBEC3FQ8IUX4 373 aaKnown RBP7.16□□□□□ -1.26
PTPN3-202ENST00000374541 HOMER2Q9NSB8 354 aa7.16□□□□□ -1.26
PTPN3-202ENST00000374541 STX8Q9UNK0 236 aa7.16□□□□□ -1.26
PTPN3-202ENST00000374541 OPA1O60313 960 aa7.15□□□□□ -1.26
PTPN3-202ENST00000374541 HSF2BPO75031 334 aa7.15□□□□□ -1.26
PTPN3-202ENST00000374541 SCNN1DP51172 638 aa7.15□□□□□ -1.26
PTPN3-202ENST00000374541 MNAT1P51948 309 aa7.15□□□□□ -1.26
PTPN3-202ENST00000374541 SLC9C1Q4G0N8 1177 aa7.15□□□□□ -1.26
PTPN3-202ENST00000374541 ZNF790Q6PG37 636 aa7.15□□□□□ -1.26
PTPN3-202ENST00000374541 WDR66Q8TBY9 1149 aa7.15□□□□□ -1.26
PTPN3-202ENST00000374541 GTPBP4Q9BZE4 634 aaKnown RBP7.15□□□□□ -1.26
PTPN3-202ENST00000374541 RNF17Q9BXT8 1623 aaKnown RBP7.15□□□□□ -1.26
PTPN3-202ENST00000374541 ERVK-7P63135 1459 aa7.15□□□□□ -1.26
PTPN3-202ENST00000374541 GTPBP6O43824 516 aaPredicted RBP7.15□□□□□ -1.26
PTPN3-202ENST00000374541 KCNG4Q8TDN1 519 aa7.15□□□□□ -1.26
PTPN3-202ENST00000374541 FAM89AQ96GI7 184 aa7.15□□□□□ -1.26
PTPN3-202ENST00000374541 NOB1Q9ULX3 412 aaKnown RBP7.15□□□□□ -1.26
PTPN3-202ENST00000374541 PABPN1LA6NDY0 278 aaKnown RBP7.15□□□□□ -1.26
PTPN3-202ENST00000374541 BBOX1O75936 387 aa7.15□□□□□ -1.26
PTPN3-202ENST00000374541 EIF4A2Q14240 407 aaKnown RBP7.15□□□□□ -1.26
PTPN3-202ENST00000374541 CCDC77Q9BR77 488 aa7.15□□□□□ -1.26
PTPN3-202ENST00000374541 SPATA31A1Q5TZJ5 1347 aa7.15□□□□□ -1.27
PTPN3-202ENST00000374541 USP17L8P0C7I0 530 aa7.15□□□□□ -1.27
PTPN3-202ENST00000374541 GTF2F1P35269 517 aaKnown RBP eCLIP7.15□□□□□ -1.27
PTPN3-202ENST00000374541 CDC37L1Q7L3B6 337 aa7.15□□□□□ -1.27
PTPN3-202ENST00000374541 ADGRL2O95490 1459 aa7.15□□□□□ -1.27
PTPN3-202ENST00000374541 USP6P35125 1406 aa7.15□□□□□ -1.27
PTPN3-202ENST00000374541 PDE8AO60658 829 aa7.15□□□□□ -1.27
PTPN3-202ENST00000374541 SETSIPP0DME0 302 aa7.15□□□□□ -1.27
PTPN3-202ENST00000374541 TGFB2P61812 414 aa7.15□□□□□ -1.27
PTPN3-202ENST00000374541 CBX1P83916 185 aa7.15□□□□□ -1.27
PTPN3-202ENST00000374541 KCTD2Q14681 263 aa7.15□□□□□ -1.27
PTPN3-202ENST00000374541 GPR101Q96P66 508 aaPredicted RBP7.15□□□□□ -1.27
PTPN3-202ENST00000374541 PZPP20742 1482 aa7.15□□□□□ -1.27
PTPN3-202ENST00000374541 EIF4E1BA6NMX2 242 aaKnown RBP7.14□□□□□ -1.27
PTPN3-202ENST00000374541 NOL3O60936 208 aaKnown RBP7.14□□□□□ -1.27
PTPN3-202ENST00000374541 NUP88Q99567 741 aaPredicted RBP7.14□□□□□ -1.27
PTPN3-202ENST00000374541 GOPCQ9HD26 462 aa7.14□□□□□ -1.27
PTPN3-202ENST00000374541 ADGBQ8N7X0 1667 aa7.14□□□□□ -1.27
PTPN3-202ENST00000374541 ACTN2P35609 894 aa7.14□□□□□ -1.27
PTPN3-202ENST00000374541 IARSP41252 1262 aaKnown RBP7.14□□□□□ -1.27
PTPN3-202ENST00000374541 SNW1Q13573 536 aaKnown RBP7.14□□□□□ -1.27
PTPN3-202ENST00000374541 UBE4AQ14139 1066 aa7.14□□□□□ -1.27
PTPN3-202ENST00000374541 ATP2B3Q16720 1220 aa7.14□□□□□ -1.27
PTPN3-202ENST00000374541 CCDC12Q8WUD4 166 aaPredicted RBP7.14□□□□□ -1.27
PTPN3-202ENST00000374541 TRIM17Q9Y577 477 aa7.14□□□□□ -1.27
PTPN3-202ENST00000374541 CD2APQ9Y5K6 639 aa7.14□□□□□ -1.27
PTPN3-202ENST00000374541 IKBKGQ9Y6K9 419 aa7.14□□□□□ -1.27
PTPN3-202ENST00000374541 SPATA31A5Q5VU36 1347 aa7.14□□□□□ -1.27
PTPN3-202ENST00000374541 SPATA31A7Q8IWB4 1347 aa7.14□□□□□ -1.27
PTPN3-202ENST00000374541 DEPDC5O75140 1603 aa7.14□□□□□ -1.27
PTPN3-202ENST00000374541 SPAG1Q07617 926 aa7.14□□□□□ -1.27
PTPN3-202ENST00000374541 ARFGAP2Q8N6H7 521 aa7.14□□□□□ -1.27
PTPN3-202ENST00000374541 TSR2Q969E8 191 aaKnown RBP7.14□□□□□ -1.27
PTPN3-202ENST00000374541 CHPF2Q9P2E5 772 aa7.14□□□□□ -1.27
PTPN3-202ENST00000374541 RASAL2Q9UJF2 1139 aa7.14□□□□□ -1.27
PTPN3-202ENST00000374541 TLR3O15455 904 aaKnown RBP7.14□□□□□ -1.27
PTPN3-202ENST00000374541 NR1I2O75469 434 aa7.14□□□□□ -1.27
PTPN3-202ENST00000374541 CTNNA2P26232 953 aa7.14□□□□□ -1.27
PTPN3-202ENST00000374541 HLTFQ14527 1009 aaKnown RBP eCLIP7.14□□□□□ -1.27
PTPN3-202ENST00000374541 MFSD14BQ5SR56 506 aa7.14□□□□□ -1.27
PTPN3-202ENST00000374541 CHST3Q7LGC8 479 aa7.14□□□□□ -1.27
PTPN3-202ENST00000374541 CPXCR1Q8N123 301 aa7.14□□□□□ -1.27
PTPN3-202ENST00000374541 ANKS4BQ8N8V4 417 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms