RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 MYSM1Q5VVJ2 828 aa20.85■□□□□ 0.93
PHF1-201ENST00000374512 CHST3Q7LGC8 479 aa20.85■□□□□ 0.93
PHF1-201ENST00000374512 ZBTB38Q8NAP3 1195 aaPredicted RBP20.85■□□□□ 0.93
PHF1-201ENST00000374512 FGAP02671 866 aa20.85■□□□□ 0.93
PHF1-201ENST00000374512 TUBB4AP04350 444 aa20.85■□□□□ 0.93
PHF1-201ENST00000374512 NDUFA8P51970 172 aa20.85■□□□□ 0.93
PHF1-201ENST00000374512 SYNE3Q6ZMZ3 975 aa20.85■□□□□ 0.93
PHF1-201ENST00000374512 PIGBQ92521 554 aa20.85■□□□□ 0.93
PHF1-201ENST00000374512 ORC3Q9UBD5 711 aaPredicted RBP20.85■□□□□ 0.93
PHF1-201ENST00000374512 KLF18A0A0U1RQI7 1052 aa20.84■□□□□ 0.93
PHF1-201ENST00000374512 STARD3NLO95772 234 aa20.84■□□□□ 0.93
PHF1-201ENST00000374512 CSF1RP07333 972 aa20.84■□□□□ 0.93
PHF1-201ENST00000374512 CBX1P83916 185 aa20.84■□□□□ 0.93
PHF1-201ENST00000374512 IFIT5Q13325 482 aaKnown RBP20.84■□□□□ 0.93
PHF1-201ENST00000374512 WASHC4Q2M389 1173 aa20.84■□□□□ 0.93
PHF1-201ENST00000374512 RALYLQ86SE5 291 aaKnown RBP20.84■□□□□ 0.93
PHF1-201ENST00000374512 DNAJC10Q8IXB1 793 aa20.84■□□□□ 0.93
PHF1-201ENST00000374512 CCDC150Q8NCX0 1101 aa20.84■□□□□ 0.93
PHF1-201ENST00000374512 FAM89AQ96GI7 184 aa20.84■□□□□ 0.93
PHF1-201ENST00000374512 OGFRQ9NZT2 677 aa20.84■□□□□ 0.93
PHF1-201ENST00000374512 HPS5Q9UPZ3 1129 aa20.84■□□□□ 0.93
PHF1-201ENST00000374512 DISP2A7MBM2 1401 aa20.84■□□□□ 0.93
PHF1-201ENST00000374512 A0A1B0GVL5 298 aa20.84■□□□□ 0.93
PHF1-201ENST00000374512 GOLGA8BA8MQT2 603 aa20.84■□□□□ 0.93
PHF1-201ENST00000374512 CPLX1O14810 134 aa20.84■□□□□ 0.93
PHF1-201ENST00000374512 FOXP2O15409 715 aa20.84■□□□□ 0.93
PHF1-201ENST00000374512 CMA1P23946 247 aa20.84■□□□□ 0.93
PHF1-201ENST00000374512 FILIP1Q7Z7B0 1213 aa20.84■□□□□ 0.93
PHF1-201ENST00000374512 CCAR2Q8N163 923 aaKnown RBP20.84■□□□□ 0.93
PHF1-201ENST00000374512 TIGD1Q96MW7 591 aa20.84■□□□□ 0.93
PHF1-201ENST00000374512 ASAP1Q9ULH1 1129 aa20.84■□□□□ 0.93
PHF1-201ENST00000374512 ADORA1P30542 326 aa20.83■□□□□ 0.93
PHF1-201ENST00000374512 CLIC4Q9Y696 253 aa20.83■□□□□ 0.93
PHF1-201ENST00000374512 MYH7P12883 1935 aa20.83■□□□□ 0.92
PHF1-201ENST00000374512 ZNF213O14771 459 aa20.82■□□□□ 0.92
PHF1-201ENST00000374512 SLC3A2P08195 630 aaKnown RBP20.82■□□□□ 0.92
PHF1-201ENST00000374512 NLRP12P59046 1061 aa20.82■□□□□ 0.92
PHF1-201ENST00000374512 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.82■□□□□ 0.927e-8■■■■□ 22.1
PHF1-201ENST00000374512 MAP3K15Q6ZN16 1313 aa20.82■□□□□ 0.92
PHF1-201ENST00000374512 NRDCO43847 1150 aa20.82■□□□□ 0.92
PHF1-201ENST00000374512 ANO1Q5XXA6 986 aa20.82■□□□□ 0.92
PHF1-201ENST00000374512 KIF18AQ8NI77 898 aa20.82■□□□□ 0.92
PHF1-201ENST00000374512 ARID5BQ14865 1188 aa20.81■□□□□ 0.92
PHF1-201ENST00000374512 GIGYF2Q6Y7W6 1299 aaKnown RBP20.81■□□□□ 0.92
PHF1-201ENST00000374512 NBPF11Q86T75 865 aa20.81■□□□□ 0.92
PHF1-201ENST00000374512 ZNF512BQ96KM6 892 aaPredicted RBP20.81■□□□□ 0.92
PHF1-201ENST00000374512 CCDC85AQ96PX6 553 aaPredicted RBP20.81■□□□□ 0.92
PHF1-201ENST00000374512 PLCH1Q4KWH8 1693 aa20.81■□□□□ 0.92
PHF1-201ENST00000374512 CDHR2Q9BYE9 1310 aa20.81■□□□□ 0.92
PHF1-201ENST00000374512 IKBKBO14920 756 aa20.81■□□□□ 0.92
PHF1-201ENST00000374512 CDKL5O76039 1030 aa20.81■□□□□ 0.92
PHF1-201ENST00000374512 ZNF202O95125 648 aa20.81■□□□□ 0.92
PHF1-201ENST00000374512 KIF23Q02241 960 aaPredicted RBP20.81■□□□□ 0.92
PHF1-201ENST00000374512 NEDD4P46934 1319 aa20.8■□□□□ 0.92
PHF1-201ENST00000374512 LRP6O75581 1613 aa20.8■□□□□ 0.92
PHF1-201ENST00000374512 U2AF2P26368 475 aaKnown RBP eCLIP20.8■□□□□ 0.923e-7■■■□□ 14.7
PHF1-201ENST00000374512 TRDNQ13061 729 aa20.8■□□□□ 0.92
PHF1-201ENST00000374512 COL22A1Q8NFW1 1626 aaPredicted RBP20.8■□□□□ 0.92
PHF1-201ENST00000374512 ROBO1Q9Y6N7 1651 aa20.8■□□□□ 0.92
PHF1-201ENST00000374512 PSDA5PKW4 1024 aaPredicted RBP20.8■□□□□ 0.92
PHF1-201ENST00000374512 POLR3DP05423 398 aaPredicted RBP20.8■□□□□ 0.92
PHF1-201ENST00000374512 ANTXR2P58335 489 aa20.8■□□□□ 0.92
PHF1-201ENST00000374512 SLC39A14Q15043 492 aa20.8■□□□□ 0.92
PHF1-201ENST00000374512 DPCR1Q3MIW9 517 aa20.8■□□□□ 0.92
PHF1-201ENST00000374512 HSP90AB3PQ58FF7 597 aa20.8■□□□□ 0.92
PHF1-201ENST00000374512 AXDND1Q5T1B0 1012 aaPredicted RBP20.8■□□□□ 0.92
PHF1-201ENST00000374512 JMYQ8N9B5 988 aa20.8■□□□□ 0.92
PHF1-201ENST00000374512 GPHNQ9NQX3 736 aaPredicted RBP20.8■□□□□ 0.92
PHF1-201ENST00000374512 USP27XA6NNY8 438 aa20.79■□□□□ 0.92
PHF1-201ENST00000374512 ZAP70P43403 619 aa20.79■□□□□ 0.92
PHF1-201ENST00000374512 HAND2P61296 217 aa20.79■□□□□ 0.92
PHF1-201ENST00000374512 ZNF592Q92610 1267 aa20.79■□□□□ 0.92
PHF1-201ENST00000374512 ERO1AQ96HE7 468 aa20.79■□□□□ 0.92
PHF1-201ENST00000374512 C4AP0C0L4 1744 aa20.79■□□□□ 0.92
PHF1-201ENST00000374512 C4BP0C0L5 1744 aa20.79■□□□□ 0.92
PHF1-201ENST00000374512 ATRNO75882 1429 aa20.79■□□□□ 0.92
PHF1-201ENST00000374512 KAT6BQ8WYB5 2073 aa20.78■□□□□ 0.92
PHF1-201ENST00000374512 GPAA1O43292 621 aa20.78■□□□□ 0.92
PHF1-201ENST00000374512 MYO1BO43795 1136 aa20.78■□□□□ 0.92
PHF1-201ENST00000374512 PPP6R2O75170 966 aa20.78■□□□□ 0.92
PHF1-201ENST00000374512 SCARF1Q14162 830 aa20.78■□□□□ 0.92
PHF1-201ENST00000374512 TTF1Q15361 905 aaPredicted RBP20.78■□□□□ 0.92
PHF1-201ENST00000374512 MYH3P11055 1940 aa20.78■□□□□ 0.92
PHF1-201ENST00000374512 ZMYM6O95789 1325 aa20.78■□□□□ 0.92
PHF1-201ENST00000374512 AHDC1Q5TGY3 1603 aaPredicted RBP20.78■□□□□ 0.92
PHF1-201ENST00000374512 BCL9O00512 1426 aa20.78■□□□□ 0.92
PHF1-201ENST00000374512 RIC1Q4ADV7 1423 aa20.78■□□□□ 0.92
PHF1-201ENST00000374512 METTL24Q5JXM2 366 aa20.78■□□□□ 0.92
PHF1-201ENST00000374512 CPLX2Q6PUV4 134 aaKnown RBP20.78■□□□□ 0.92
PHF1-201ENST00000374512 PUS7LQ9H0K6 701 aaKnown RBP20.78■□□□□ 0.92
PHF1-201ENST00000374512 ANGEL1Q9UNK9 670 aaKnown RBP20.78■□□□□ 0.92
PHF1-201ENST00000374512 ANKRD36CQ5JPF3 1778 aa20.77■□□□□ 0.92
PHF1-201ENST00000374512 OTUD7BQ6GQQ9 843 aa20.77■□□□□ 0.92
PHF1-201ENST00000374512 NLRP10Q86W26 655 aa20.77■□□□□ 0.92
PHF1-201ENST00000374512 RIPOR2Q9Y4F9 1068 aa20.77■□□□□ 0.92
PHF1-201ENST00000374512 COL16A1Q07092 1604 aaPredicted RBP20.77■□□□□ 0.92
PHF1-201ENST00000374512 FAM237AA0A1B0GTK4 181 aa20.77■□□□□ 0.91
PHF1-201ENST00000374512 CCP110O43303 1012 aa20.77■□□□□ 0.91
PHF1-201ENST00000374512 PPFIA3O75145 1194 aa20.77■□□□□ 0.91
PHF1-201ENST00000374512 PFKFB1P16118 471 aa20.77■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 1250.7 ms