RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 RRP9O43818 475 aaKnown RBP12.52□□□□□ -0.4
PHACTR4-202ENST00000373839 TUBBP07437 444 aa12.52□□□□□ -0.4
PHACTR4-202ENST00000373839 ATP2A2P16615 1042 aaKnown RBP12.52□□□□□ -0.4
PHACTR4-202ENST00000373839 LRRC2Q9BYS8 371 aa12.52□□□□□ -0.4
PHACTR4-202ENST00000373839 ARHGEF12Q9NZN5 1544 aa12.52□□□□□ -0.4
PHACTR4-202ENST00000373839 A0A1W2PRG0 241 aa12.52□□□□□ -0.41
PHACTR4-202ENST00000373839 JAKMIP2Q96AA8 810 aa12.52□□□□□ -0.41
PHACTR4-202ENST00000373839 PRIMPOLQ96LW4 560 aa12.52□□□□□ -0.41
PHACTR4-202ENST00000373839 CEP63Q96MT8 703 aa12.52□□□□□ -0.41
PHACTR4-202ENST00000373839 BIN2Q9UBW5 565 aaPredicted RBP12.52□□□□□ -0.41
PHACTR4-202ENST00000373839 MBD4O95243 580 aa12.52□□□□□ -0.41
PHACTR4-202ENST00000373839 CWF19L2Q2TBE0 894 aaKnown RBP12.52□□□□□ -0.41
PHACTR4-202ENST00000373839 VWA3BQ502W6 1294 aa12.52□□□□□ -0.41
PHACTR4-202ENST00000373839 ZNF710Q8N1W2 664 aa12.52□□□□□ -0.41
PHACTR4-202ENST00000373839 GPHNQ9NQX3 736 aaPredicted RBP12.52□□□□□ -0.41
PHACTR4-202ENST00000373839 DEXIO95424 95 aa12.52□□□□□ -0.41
PHACTR4-202ENST00000373839 IGHDP01880 384 aa12.52□□□□□ -0.41
PHACTR4-202ENST00000373839 ALDH1B1P30837 517 aa12.52□□□□□ -0.41
PHACTR4-202ENST00000373839 SV2BQ7L1I2 683 aa12.52□□□□□ -0.41
PHACTR4-202ENST00000373839 PNMA2Q9UL42 364 aa12.52□□□□□ -0.41
PHACTR4-202ENST00000373839 BMS1Q14692 1282 aaKnown RBP12.51□□□□□ -0.41
PHACTR4-202ENST00000373839 RAB3IL1Q8TBN0 382 aa12.51□□□□□ -0.41
PHACTR4-202ENST00000373839 FRMD4BQ9Y2L6 1034 aa12.51□□□□□ -0.41
PHACTR4-202ENST00000373839 ATP10AO60312 1499 aa12.51□□□□□ -0.41
PHACTR4-202ENST00000373839 DPP8Q6V1X1 898 aaPredicted RBP12.51□□□□□ -0.41
PHACTR4-202ENST00000373839 BEGAINQ9BUH8 593 aa12.51□□□□□ -0.41
PHACTR4-202ENST00000373839 PTPDC1A2A3K4 754 aa12.51□□□□□ -0.41
PHACTR4-202ENST00000373839 WDR44Q5JSH3 913 aa12.51□□□□□ -0.41
PHACTR4-202ENST00000373839 CEP128Q6ZU80 1094 aa12.51□□□□□ -0.41
PHACTR4-202ENST00000373839 HELBQ8NG08 1087 aaPredicted RBP12.51□□□□□ -0.41
PHACTR4-202ENST00000373839 A0A1W2PP64 1363 aa12.51□□□□□ -0.41
PHACTR4-202ENST00000373839 ABCC2Q92887 1545 aa12.51□□□□□ -0.41
PHACTR4-202ENST00000373839 ITGA6P23229 1130 aa12.51□□□□□ -0.41
PHACTR4-202ENST00000373839 HSPA2P54652 639 aa12.51□□□□□ -0.41
PHACTR4-202ENST00000373839 CEP135Q66GS9 1140 aa12.51□□□□□ -0.41
PHACTR4-202ENST00000373839 KIFAP3Q92845 792 aa12.51□□□□□ -0.41
PHACTR4-202ENST00000373839 IFT74Q96LB3 600 aa12.51□□□□□ -0.41
PHACTR4-202ENST00000373839 CDAN1Q8IWY9 1227 aa12.51□□□□□ -0.41
PHACTR4-202ENST00000373839 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.51□□□□□ -0.41
PHACTR4-202ENST00000373839 NDC80O14777 642 aa12.5□□□□□ -0.41
PHACTR4-202ENST00000373839 EEF2P13639 858 aaKnown RBP12.5□□□□□ -0.41
PHACTR4-202ENST00000373839 LARGE2Q8N3Y3 721 aa12.5□□□□□ -0.41
PHACTR4-202ENST00000373839 APPBP2Q92624 585 aa12.5□□□□□ -0.41
PHACTR4-202ENST00000373839 RUFY3Q7L099 469 aa12.5□□□□□ -0.41
PHACTR4-202ENST00000373839 FNBP1Q96RU3 617 aa12.5□□□□□ -0.41
PHACTR4-202ENST00000373839 MROH5Q6ZUA9 1318 aa12.5□□□□□ -0.41
PHACTR4-202ENST00000373839 MARCKSP29966 332 aaPredicted RBP12.5□□□□□ -0.41
PHACTR4-202ENST00000373839 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.5□□□□□ -0.41
PHACTR4-202ENST00000373839 CSRNP2Q9H175 543 aa12.5□□□□□ -0.41
PHACTR4-202ENST00000373839 BICC1Q9H694 974 aaKnown RBP12.5□□□□□ -0.41
PHACTR4-202ENST00000373839 DACT1Q9NYF0 836 aa12.5□□□□□ -0.41
PHACTR4-202ENST00000373839 MTUS1Q9ULD2 1270 aa12.5□□□□□ -0.41
PHACTR4-202ENST00000373839 GJA3Q9Y6H8 435 aa12.5□□□□□ -0.41
PHACTR4-202ENST00000373839 NPC1L1Q9UHC9 1359 aa12.5□□□□□ -0.41
PHACTR4-202ENST00000373839 ZBED4O75132 1171 aa12.5□□□□□ -0.41
PHACTR4-202ENST00000373839 LPIN2Q92539 896 aa12.5□□□□□ -0.41
PHACTR4-202ENST00000373839 EPB41P11171 864 aaKnown RBP12.5□□□□□ -0.41
PHACTR4-202ENST00000373839 TNFAIP1Q13829 316 aa12.5□□□□□ -0.41
PHACTR4-202ENST00000373839 MCTP2Q6DN12 878 aa12.5□□□□□ -0.41
PHACTR4-202ENST00000373839 ISM2Q6H9L7 571 aa12.5□□□□□ -0.41
PHACTR4-202ENST00000373839 OTUD6BQ8N6M0 293 aa12.5□□□□□ -0.41
PHACTR4-202ENST00000373839 GABPB2Q8TAK5 448 aaPredicted RBP12.5□□□□□ -0.41
PHACTR4-202ENST00000373839 ATP6V0A2Q9Y487 856 aa12.5□□□□□ -0.41
PHACTR4-202ENST00000373839 TCOF1Q13428 1488 aaKnown RBP12.5□□□□□ -0.41
PHACTR4-202ENST00000373839 OPA1O60313 960 aa12.49□□□□□ -0.41
PHACTR4-202ENST00000373839 HCLS1P14317 486 aaPredicted RBP12.49□□□□□ -0.41
PHACTR4-202ENST00000373839 ANO6Q4KMQ2 910 aa12.49□□□□□ -0.41
PHACTR4-202ENST00000373839 STX10O60499 249 aa12.49□□□□□ -0.41
PHACTR4-202ENST00000373839 GAS8O95995 478 aa12.49□□□□□ -0.41
PHACTR4-202ENST00000373839 FBLN1P23142 703 aa12.49□□□□□ -0.41
PHACTR4-202ENST00000373839 NOX5Q96PH1 765 aa12.49□□□□□ -0.41
PHACTR4-202ENST00000373839 LLPHQ9BRT6 129 aaKnown RBP12.49□□□□□ -0.41
PHACTR4-202ENST00000373839 A0A1B0GUL7 405 aa12.49□□□□□ -0.41
PHACTR4-202ENST00000373839 SLU7O95391 586 aaKnown RBP12.49□□□□□ -0.41
PHACTR4-202ENST00000373839 TXNDC16Q9P2K2 825 aa12.49□□□□□ -0.41
PHACTR4-202ENST00000373839 IBTKQ9P2D0 1353 aaPredicted RBP12.49□□□□□ -0.41
PHACTR4-202ENST00000373839 MCM7P33993 719 aa12.49□□□□□ -0.41
PHACTR4-202ENST00000373839 ZSCAN23Q3MJ62 389 aa12.49□□□□□ -0.41
PHACTR4-202ENST00000373839 GSTA5Q7RTV2 222 aa12.49□□□□□ -0.41
PHACTR4-202ENST00000373839 TCEANC2Q96MN5 208 aa12.49□□□□□ -0.41
PHACTR4-202ENST00000373839 SLC5A4Q9NY91 659 aa12.49□□□□□ -0.41
PHACTR4-202ENST00000373839 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.49□□□□□ -0.41
PHACTR4-202ENST00000373839 RAB3GAP1Q15042 981 aa12.49□□□□□ -0.41
PHACTR4-202ENST00000373839 RNF187Q5TA31 235 aaPredicted RBP12.49□□□□□ -0.41
PHACTR4-202ENST00000373839 GIMAP6Q6P9H5 292 aa12.49□□□□□ -0.41
PHACTR4-202ENST00000373839 CNGA4Q8IV77 575 aa12.49□□□□□ -0.41
PHACTR4-202ENST00000373839 NIM1KQ8IY84 436 aa12.49□□□□□ -0.41
PHACTR4-202ENST00000373839 TSGA10Q9BZW7 698 aa12.49□□□□□ -0.41
PHACTR4-202ENST00000373839 SLC52A2Q9HAB3 445 aa12.49□□□□□ -0.41
PHACTR4-202ENST00000373839 PCDHB15Q9Y5E8 787 aa12.49□□□□□ -0.41
PHACTR4-202ENST00000373839 SBNO2Q9Y2G9 1366 aa12.49□□□□□ -0.41
PHACTR4-202ENST00000373839 RGS22Q8NE09 1264 aa12.48□□□□□ -0.41
PHACTR4-202ENST00000373839 MTRF1LQ9UGC7 380 aaKnown RBP12.48□□□□□ -0.41
PHACTR4-202ENST00000373839 ELP1O95163 1332 aa12.48□□□□□ -0.41
PHACTR4-202ENST00000373839 SKILP12757 684 aa12.48□□□□□ -0.41
PHACTR4-202ENST00000373839 PLCB3Q01970 1234 aa12.48□□□□□ -0.41
PHACTR4-202ENST00000373839 TRIM14Q14142 442 aa12.48□□□□□ -0.41
PHACTR4-202ENST00000373839 SMC5Q8IY18 1101 aa12.48□□□□□ -0.41
PHACTR4-202ENST00000373839 FAM212AQ96EL1 285 aa12.48□□□□□ -0.41
PHACTR4-202ENST00000373839 CNPY2Q9Y2B0 182 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms