RNA–Protein interactions for RNA: ENST00000373198.8

PTPRT-206, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,746 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-206ENST00000373198 ERBINQ96RT1 1412 aa10.14□□□□□ -0.79
PTPRT-206ENST00000373198 OATP04181 439 aa10.14□□□□□ -0.79
PTPRT-206ENST00000373198 ZNF853P0CG23 659 aa10.14□□□□□ -0.79
PTPRT-206ENST00000373198 EPB41P11171 864 aaKnown RBP10.14□□□□□ -0.79
PTPRT-206ENST00000373198 FYB2Q5VWT5 728 aa10.14□□□□□ -0.79
PTPRT-206ENST00000373198 PARP3Q9Y6F1 533 aa10.14□□□□□ -0.79
PTPRT-206ENST00000373198 CDR2Q01850 454 aa10.14□□□□□ -0.79
PTPRT-206ENST00000373198 USTQ9Y2C2 406 aa10.14□□□□□ -0.79
PTPRT-206ENST00000373198 PAXBP1Q9Y5B6 917 aa10.14□□□□□ -0.79
PTPRT-206ENST00000373198 BICDL2A1A5D9 508 aa10.14□□□□□ -0.79
PTPRT-206ENST00000373198 GOLGA6CA6NDK9 693 aa10.14□□□□□ -0.79
PTPRT-206ENST00000373198 GOLGA6BA6NDN3 693 aa10.14□□□□□ -0.79
PTPRT-206ENST00000373198 GOLGA6DP0CG33 693 aa10.14□□□□□ -0.79
PTPRT-206ENST00000373198 NECAB1Q8N987 351 aa10.14□□□□□ -0.79
PTPRT-206ENST00000373198 POMGNT1Q8WZA1 660 aa10.14□□□□□ -0.79
PTPRT-206ENST00000373198 KIFAP3Q92845 792 aa10.14□□□□□ -0.79
PTPRT-206ENST00000373198 GOLGA6AQ9NYA3 693 aa10.14□□□□□ -0.79
PTPRT-206ENST00000373198 SKAP1Q86WV1 359 aa10.14□□□□□ -0.79
PTPRT-206ENST00000373198 PPFIBP2Q8ND30 876 aa10.14□□□□□ -0.79
PTPRT-206ENST00000373198 NEK1Q96PY6 1258 aa10.14□□□□□ -0.79
PTPRT-206ENST00000373198 CALCOCO2Q13137 446 aa10.14□□□□□ -0.79
PTPRT-206ENST00000373198 CCDC122Q5T0U0 273 aa10.14□□□□□ -0.79
PTPRT-206ENST00000373198 SAP30BPQ9UHR5 308 aaKnown RBP10.14□□□□□ -0.79
PTPRT-206ENST00000373198 MTUS1Q9ULD2 1270 aa10.14□□□□□ -0.79
PTPRT-206ENST00000373198 TRAF1Q13077 416 aa10.14□□□□□ -0.79
PTPRT-206ENST00000373198 AFAP1Q8N556 730 aa10.14□□□□□ -0.79
PTPRT-206ENST00000373198 GPR161Q8N6U8 529 aaKnown RBP10.14□□□□□ -0.79
PTPRT-206ENST00000373198 LZTFL1Q9NQ48 299 aa10.14□□□□□ -0.79
PTPRT-206ENST00000373198 GBP1P32455 592 aa10.13□□□□□ -0.79
PTPRT-206ENST00000373198 ANKRD24Q8TF21 1146 aa10.13□□□□□ -0.79
PTPRT-206ENST00000373198 HAUS2Q9NVX0 235 aa10.13□□□□□ -0.79
PTPRT-206ENST00000373198 SPDYE2BA6NHP3 402 aa10.13□□□□□ -0.79
PTPRT-206ENST00000373198 FOXO3O43524 673 aa10.13□□□□□ -0.79
PTPRT-206ENST00000373198 SPDYE6P0CI01 402 aa10.13□□□□□ -0.79
PTPRT-206ENST00000373198 SETSIPP0DME0 302 aa10.13□□□□□ -0.79
PTPRT-206ENST00000373198 MAP7Q14244 749 aa10.13□□□□□ -0.79
PTPRT-206ENST00000373198 FCHSD1Q86WN1 690 aa10.13□□□□□ -0.79
PTPRT-206ENST00000373198 CACNA2D3Q8IZS8 1091 aa10.13□□□□□ -0.79
PTPRT-206ENST00000373198 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.13□□□□□ -0.79
PTPRT-206ENST00000373198 M0QZ92 97 aa10.13□□□□□ -0.79
PTPRT-206ENST00000373198 ANO6Q4KMQ2 910 aa10.13□□□□□ -0.79
PTPRT-206ENST00000373198 DCLK2Q8N568 766 aa10.13□□□□□ -0.79
PTPRT-206ENST00000373198 MED10Q9BTT4 135 aa10.13□□□□□ -0.79
PTPRT-206ENST00000373198 BZW2Q9Y6E2 419 aaKnown RBP10.13□□□□□ -0.79
PTPRT-206ENST00000373198 MAGEB6P1A0A0J9YX57 407 aa10.13□□□□□ -0.79
PTPRT-206ENST00000373198 IFRD2Q12894 506 aaPredicted RBP10.13□□□□□ -0.79
PTPRT-206ENST00000373198 XAB2Q9HCS7 855 aaKnown RBP10.13□□□□□ -0.79
PTPRT-206ENST00000373198 SFMBT1Q9UHJ3 866 aa10.13□□□□□ -0.79
PTPRT-206ENST00000373198 KRT19P08727 400 aa10.13□□□□□ -0.79
PTPRT-206ENST00000373198 MYCLP12524 364 aaPredicted RBP10.13□□□□□ -0.79
PTPRT-206ENST00000373198 SYT1P21579 422 aa10.13□□□□□ -0.79
PTPRT-206ENST00000373198 STX17P56962 302 aa10.13□□□□□ -0.79
PTPRT-206ENST00000373198 RNF169Q8NCN4 708 aa10.13□□□□□ -0.79
PTPRT-206ENST00000373198 MCUR1Q96AQ8 359 aa10.13□□□□□ -0.79
PTPRT-206ENST00000373198 IFT74Q96LB3 600 aa10.13□□□□□ -0.79
PTPRT-206ENST00000373198 KIF9Q9HAQ2 790 aa10.13□□□□□ -0.79
PTPRT-206ENST00000373198 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.13□□□□□ -0.79
PTPRT-206ENST00000373198 POGZQ7Z3K3 1410 aa10.13□□□□□ -0.79
PTPRT-206ENST00000373198 ZYXQ15942 572 aaKnown RBP10.13□□□□□ -0.79
PTPRT-206ENST00000373198 SMIM24O75264 130 aa10.13□□□□□ -0.79
PTPRT-206ENST00000373198 KRT2P35908 639 aa10.13□□□□□ -0.79
PTPRT-206ENST00000373198 SLC12A2P55011 1212 aa10.13□□□□□ -0.79
PTPRT-206ENST00000373198 ITKQ08881 620 aa10.13□□□□□ -0.79
PTPRT-206ENST00000373198 RBBP5Q15291 538 aaKnown RBP10.13□□□□□ -0.79
PTPRT-206ENST00000373198 AMOTQ4VCS5 1084 aa10.13□□□□□ -0.79
PTPRT-206ENST00000373198 GABPB2Q8TAK5 448 aaPredicted RBP10.13□□□□□ -0.79
PTPRT-206ENST00000373198 I3L4J1 428 aa10.13□□□□□ -0.79
PTPRT-206ENST00000373198 PRKG1Q13976 671 aa10.13□□□□□ -0.79
PTPRT-206ENST00000373198 KRT79Q5XKE5 535 aa10.13□□□□□ -0.79
PTPRT-206ENST00000373198 STRN3Q13033 797 aa10.13□□□□□ -0.79
PTPRT-206ENST00000373198 KRBA2Q6ZNG9 492 aa10.13□□□□□ -0.79
PTPRT-206ENST00000373198 CNGA1P29973 690 aa10.12□□□□□ -0.79
PTPRT-206ENST00000373198 MUM1L1Q5H9M0 696 aa10.12□□□□□ -0.79
PTPRT-206ENST00000373198 ANKRD50Q9ULJ7 1429 aa10.12□□□□□ -0.79
PTPRT-206ENST00000373198 MAGEB6Q8N7X4 407 aa10.12□□□□□ -0.79
PTPRT-206ENST00000373198 RNF217Q8TC41 542 aa10.12□□□□□ -0.79
PTPRT-206ENST00000373198 MRPL46Q9H2W6 279 aaKnown RBP10.12□□□□□ -0.79
PTPRT-206ENST00000373198 PPFIA2O75334 1257 aa10.12□□□□□ -0.79
PTPRT-206ENST00000373198 TFCP2L1Q9NZI6 479 aa10.12□□□□□ -0.79
PTPRT-206ENST00000373198 DDX39AO00148 427 aaKnown RBP10.12□□□□□ -0.79
PTPRT-206ENST00000373198 ZNF569Q5MCW4 686 aa10.12□□□□□ -0.79
PTPRT-206ENST00000373198 PTPDC1A2A3K4 754 aa10.12□□□□□ -0.79
PTPRT-206ENST00000373198 STMN1P16949 149 aa10.12□□□□□ -0.79
PTPRT-206ENST00000373198 NUDT16Q96DE0 195 aaKnown RBP10.12□□□□□ -0.79
PTPRT-206ENST00000373198 CSRNP2Q9H175 543 aa10.12□□□□□ -0.79
PTPRT-206ENST00000373198 ITM2BQ9Y287 266 aa10.12□□□□□ -0.79
PTPRT-206ENST00000373198 ATP5DP30049 168 aa10.12□□□□□ -0.79
PTPRT-206ENST00000373198 AOPEPQ8N6M6 819 aa10.12□□□□□ -0.79
PTPRT-206ENST00000373198 GPCPD1Q9NPB8 672 aa10.12□□□□□ -0.79
PTPRT-206ENST00000373198 CTNND2Q9UQB3 1225 aa10.12□□□□□ -0.79
PTPRT-206ENST00000373198 IVNS1ABPQ9Y6Y0 642 aa10.12□□□□□ -0.79
PTPRT-206ENST00000373198 SMTNP53814 917 aa10.12□□□□□ -0.79
PTPRT-206ENST00000373198 EAPPQ56P03 285 aaPredicted RBP10.12□□□□□ -0.79
PTPRT-206ENST00000373198 SORBS3O60504 671 aa10.12□□□□□ -0.79
PTPRT-206ENST00000373198 CXorf38Q8TB03 319 aa10.12□□□□□ -0.79
PTPRT-206ENST00000373198 KSR1Q8IVT5 923 aa10.12□□□□□ -0.79
PTPRT-206ENST00000373198 SCYL1Q96KG9 808 aa10.12□□□□□ -0.79
PTPRT-206ENST00000373198 VCXQ9H320 206 aa10.12□□□□□ -0.79
PTPRT-206ENST00000373198 MCM9Q9NXL9 1143 aa10.12□□□□□ -0.79
PTPRT-206ENST00000373198 HCLS1P14317 486 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms