RNA–Protein interactions for RNA: ENST00000373190.5

PTPRT-204, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRT, Length 12,559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-204ENST00000373190 ZNF853P0CG23 659 aa9.87□□□□□ -0.83
PTPRT-204ENST00000373190 PNMA8AQ86V59 439 aaPredicted RBP9.87□□□□□ -0.83
PTPRT-204ENST00000373190 CTNND2Q9UQB3 1225 aa9.87□□□□□ -0.83
PTPRT-204ENST00000373190 CASQ2O14958 399 aaPredicted RBP9.87□□□□□ -0.83
PTPRT-204ENST00000373190 PTPDC1A2A3K4 754 aa9.87□□□□□ -0.83
PTPRT-204ENST00000373190 PTCD1O75127 700 aaKnown RBP9.87□□□□□ -0.83
PTPRT-204ENST00000373190 GOLGA5Q8TBA6 731 aa9.87□□□□□ -0.83
PTPRT-204ENST00000373190 CBX8Q9HC52 389 aa9.87□□□□□ -0.83
PTPRT-204ENST00000373190 PLCB3Q01970 1234 aa9.87□□□□□ -0.83
PTPRT-204ENST00000373190 RGS22Q8NE09 1264 aa9.87□□□□□ -0.83
PTPRT-204ENST00000373190 CABS1Q96KC9 395 aa9.87□□□□□ -0.83
PTPRT-204ENST00000373190 CEP85Q6P2H3 762 aa9.87□□□□□ -0.83
PTPRT-204ENST00000373190 SPATS2Q86XZ4 545 aaKnown RBP9.87□□□□□ -0.83
PTPRT-204ENST00000373190 PSMD1Q99460 953 aa9.87□□□□□ -0.83
PTPRT-204ENST00000373190 PLCB1Q9NQ66 1216 aa9.87□□□□□ -0.83
PTPRT-204ENST00000373190 SNRKQ9NRH2 765 aa9.87□□□□□ -0.83
PTPRT-204ENST00000373190 ARL1P40616 181 aaPredicted RBP9.87□□□□□ -0.83
PTPRT-204ENST00000373190 MRPL50Q8N5N7 158 aaKnown RBP9.87□□□□□ -0.83
PTPRT-204ENST00000373190 RNF10Q8N5U6 811 aaKnown RBP9.87□□□□□ -0.83
PTPRT-204ENST00000373190 NOX5Q96PH1 765 aa9.87□□□□□ -0.83
PTPRT-204ENST00000373190 HDAC9Q9UKV0 1011 aa9.87□□□□□ -0.83
PTPRT-204ENST00000373190 CALM1P0DP23 149 aa9.87□□□□□ -0.83
PTPRT-204ENST00000373190 CALM2P0DP24 149 aa9.87□□□□□ -0.83
PTPRT-204ENST00000373190 CALM3P0DP25 149 aa9.87□□□□□ -0.83
PTPRT-204ENST00000373190 NMIQ13287 307 aaPredicted RBP9.87□□□□□ -0.83
PTPRT-204ENST00000373190 CRNKL1Q9BZJ0 848 aaKnown RBP9.87□□□□□ -0.83
PTPRT-204ENST00000373190 DMTNQ08495 405 aa9.87□□□□□ -0.83
PTPRT-204ENST00000373190 LDHAL6AQ6ZMR3 332 aa9.87□□□□□ -0.83
PTPRT-204ENST00000373190 ARHGEF2Q92974 986 aaKnown RBP9.87□□□□□ -0.83
PTPRT-204ENST00000373190 ZBTB40Q9NUA8 1239 aa9.87□□□□□ -0.83
PTPRT-204ENST00000373190 PAG1Q9NWQ8 432 aa9.87□□□□□ -0.83
PTPRT-204ENST00000373190 SOS1Q07889 1333 aaPredicted RBP9.86□□□□□ -0.83
PTPRT-204ENST00000373190 PPP1R2P41236 205 aa9.86□□□□□ -0.83
PTPRT-204ENST00000373190 RASSF2P50749 326 aa9.86□□□□□ -0.83
PTPRT-204ENST00000373190 BRD3Q15059 726 aa9.86□□□□□ -0.83
PTPRT-204ENST00000373190 ERCC6LQ2NKX8 1250 aa9.86□□□□□ -0.83
PTPRT-204ENST00000373190 RNF168Q8IYW5 571 aaPredicted RBP9.86□□□□□ -0.83
PTPRT-204ENST00000373190 GMNNO75496 209 aa9.86□□□□□ -0.83
PTPRT-204ENST00000373190 GKAP1Q5VSY0 366 aaPredicted RBP9.86□□□□□ -0.83
PTPRT-204ENST00000373190 ZPR1O75312 459 aa9.86□□□□□ -0.83
PTPRT-204ENST00000373190 ATP8B2P98198 1209 aa9.86□□□□□ -0.83
PTPRT-204ENST00000373190 RPGRIP1Q96KN7 1286 aa9.86□□□□□ -0.83
PTPRT-204ENST00000373190 CDC5LQ99459 802 aaKnown RBP9.86□□□□□ -0.83
PTPRT-204ENST00000373190 HEATR3Q7Z4Q2 680 aa9.86□□□□□ -0.83
PTPRT-204ENST00000373190 PROSER2Q86WR7 435 aaPredicted RBP9.86□□□□□ -0.83
PTPRT-204ENST00000373190 IMPG2Q9BZV3 1241 aa9.86□□□□□ -0.83
PTPRT-204ENST00000373190 CSRNP2Q9H175 543 aa9.86□□□□□ -0.83
PTPRT-204ENST00000373190 MED4Q9NPJ6 270 aa9.86□□□□□ -0.83
PTPRT-204ENST00000373190 E7EVH7 732 aa9.86□□□□□ -0.83
PTPRT-204ENST00000373190 LLPHQ9BRT6 129 aaKnown RBP9.86□□□□□ -0.83
PTPRT-204ENST00000373190 CLSTN2Q9H4D0 955 aa9.86□□□□□ -0.83
PTPRT-204ENST00000373190 ODF2LQ9ULJ1 636 aa9.86□□□□□ -0.83
PTPRT-204ENST00000373190 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.86□□□□□ -0.83
PTPRT-204ENST00000373190 USH1CQ9Y6N9 552 aa9.86□□□□□ -0.83
PTPRT-204ENST00000373190 SLC8A1P32418 973 aa9.86□□□□□ -0.83
PTPRT-204ENST00000373190 ZNF131P52739 623 aa9.86□□□□□ -0.83
PTPRT-204ENST00000373190 FANCCQ00597 558 aa9.86□□□□□ -0.83
PTPRT-204ENST00000373190 OSCARQ8IYS5 282 aa9.86□□□□□ -0.83
PTPRT-204ENST00000373190 CLUL1Q15846 466 aa9.86□□□□□ -0.83
PTPRT-204ENST00000373190 SEPT14Q6ZU15 432 aa9.86□□□□□ -0.83
PTPRT-204ENST00000373190 KIF21AQ7Z4S6 1674 aa9.86□□□□□ -0.83
PTPRT-204ENST00000373190 INF2Q27J81 1249 aa9.86□□□□□ -0.83
PTPRT-204ENST00000373190 CYB5RLQ6IPT4 315 aa9.86□□□□□ -0.83
PTPRT-204ENST00000373190 UBL4BQ8N7F7 174 aa9.86□□□□□ -0.83
PTPRT-204ENST00000373190 CHMLP26374 656 aa9.86□□□□□ -0.83
PTPRT-204ENST00000373190 NAPAP54920 295 aa9.86□□□□□ -0.83
PTPRT-204ENST00000373190 C16orf71Q8IYS4 520 aaPredicted RBP9.86□□□□□ -0.83
PTPRT-204ENST00000373190 SECISBP2LQ93073 1101 aaKnown RBP9.86□□□□□ -0.83
PTPRT-204ENST00000373190 FAM114A2Q9NRY5 505 aa9.86□□□□□ -0.83
PTPRT-204ENST00000373190 GJC1P36383 396 aa9.85□□□□□ -0.83
PTPRT-204ENST00000373190 ATP6V1AP38606 617 aa9.85□□□□□ -0.83
PTPRT-204ENST00000373190 VWA3BQ502W6 1294 aa9.85□□□□□ -0.83
PTPRT-204ENST00000373190 USHBP1Q8N6Y0 703 aa9.85□□□□□ -0.83
PTPRT-204ENST00000373190 GCKP35557 465 aa9.85□□□□□ -0.83
PTPRT-204ENST00000373190 BIVM-ERCC5R4GMW8 1640 aa9.85□□□□□ -0.83
PTPRT-204ENST00000373190 UQCRFS1P1P0C7P4 283 aa9.85□□□□□ -0.83
PTPRT-204ENST00000373190 POLR3AO14802 1390 aaPredicted RBP9.85□□□□□ -0.83
PTPRT-204ENST00000373190 PIK3C2GO75747 1445 aa9.85□□□□□ -0.83
PTPRT-204ENST00000373190 GRM8O00222 908 aa9.85□□□□□ -0.83
PTPRT-204ENST00000373190 GBP7Q8N8V2 638 aaPredicted RBP9.85□□□□□ -0.83
PTPRT-204ENST00000373190 TSKSQ9UJT2 592 aa9.85□□□□□ -0.83
PTPRT-204ENST00000373190 GNAT2P19087 354 aa9.85□□□□□ -0.83
PTPRT-204ENST00000373190 NUP58Q9BVL2 599 aa9.85□□□□□ -0.83
PTPRT-204ENST00000373190 RPL13P26373 211 aaKnown RBP9.85□□□□□ -0.83
PTPRT-204ENST00000373190 MTMR3Q13615 1198 aa9.85□□□□□ -0.83
PTPRT-204ENST00000373190 LRCH2Q5VUJ6 765 aa9.85□□□□□ -0.83
PTPRT-204ENST00000373190 RAB3IPQ96QF0 476 aaPredicted RBP9.85□□□□□ -0.83
PTPRT-204ENST00000373190 CAPN7Q9Y6W3 813 aa9.85□□□□□ -0.83
PTPRT-204ENST00000373190 MSH6P52701 1360 aa9.85□□□□□ -0.83
PTPRT-204ENST00000373190 APOBRQ0VD83 1088 aa9.85□□□□□ -0.83
PTPRT-204ENST00000373190 PAK2Q13177 524 aa9.85□□□□□ -0.83
PTPRT-204ENST00000373190 MICAL1Q8TDZ2 1067 aa9.85□□□□□ -0.83
PTPRT-204ENST00000373190 DTHD1Q6ZMT9 781 aa9.85□□□□□ -0.83
PTPRT-204ENST00000373190 TMTC1Q8IUR5 882 aa9.85□□□□□ -0.83
PTPRT-204ENST00000373190 MCM7P33993 719 aa9.85□□□□□ -0.83
PTPRT-204ENST00000373190 NUP160Q12769 1436 aa9.84□□□□□ -0.83
PTPRT-204ENST00000373190 HS2ST1Q7LGA3 356 aa9.84□□□□□ -0.83
PTPRT-204ENST00000373190 NDC80O14777 642 aa9.84□□□□□ -0.83
PTPRT-204ENST00000373190 KRT79Q5XKE5 535 aa9.84□□□□□ -0.83
PTPRT-204ENST00000373190 KCNH3Q9ULD8 1083 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms