RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 EIF2AK4Q9P2K8 1649 aaKnown RBP11.15□□□□□ -0.63
TRERF1-204ENST00000372922 KIF5AQ12840 1032 aa11.14□□□□□ -0.63
TRERF1-204ENST00000372922 ZSCAN23Q3MJ62 389 aa11.14□□□□□ -0.63
TRERF1-204ENST00000372922 TEX11Q8IYF3 940 aa11.14□□□□□ -0.63
TRERF1-204ENST00000372922 RAB3GAP1Q15042 981 aa11.14□□□□□ -0.63
TRERF1-204ENST00000372922 BRAPQ7Z569 592 aa11.14□□□□□ -0.63
TRERF1-204ENST00000372922 MAK16Q9BXY0 300 aaKnown RBP11.14□□□□□ -0.63
TRERF1-204ENST00000372922 RSPH14Q9UHP6 348 aa11.14□□□□□ -0.63
TRERF1-204ENST00000372922 FRMD4BQ9Y2L6 1034 aa11.14□□□□□ -0.63
TRERF1-204ENST00000372922 ATP2A2P16615 1042 aaKnown RBP11.14□□□□□ -0.63
TRERF1-204ENST00000372922 ARID5AQ03989 594 aa11.14□□□□□ -0.63
TRERF1-204ENST00000372922 TXNDC16Q9P2K2 825 aa11.14□□□□□ -0.63
TRERF1-204ENST00000372922 KIF3CO14782 793 aa11.14□□□□□ -0.63
TRERF1-204ENST00000372922 KRT86O43790 486 aa11.14□□□□□ -0.63
TRERF1-204ENST00000372922 SLU7O95391 586 aaKnown RBP11.14□□□□□ -0.63
TRERF1-204ENST00000372922 CCDC63Q8NA47 563 aa11.14□□□□□ -0.63
TRERF1-204ENST00000372922 NOD1Q9Y239 953 aa11.14□□□□□ -0.63
TRERF1-204ENST00000372922 EIF4G3O43432 1585 aaKnown RBP11.14□□□□□ -0.63
TRERF1-204ENST00000372922 RNMTO43148 476 aaKnown RBP11.14□□□□□ -0.63
TRERF1-204ENST00000372922 TCEANC2Q96MN5 208 aa11.14□□□□□ -0.63
TRERF1-204ENST00000372922 NUP160Q12769 1436 aa11.14□□□□□ -0.63
TRERF1-204ENST00000372922 PTGS1P23219 599 aa11.14□□□□□ -0.63
TRERF1-204ENST00000372922 SLC8A3P57103 927 aa11.14□□□□□ -0.63
TRERF1-204ENST00000372922 SNX16P57768 344 aa11.14□□□□□ -0.63
TRERF1-204ENST00000372922 CTAGE9A4FU28 777 aa11.13□□□□□ -0.63
TRERF1-204ENST00000372922 GCP02774 474 aa11.13□□□□□ -0.63
TRERF1-204ENST00000372922 MXRA7P84157 204 aa11.13□□□□□ -0.63
TRERF1-204ENST00000372922 WDR44Q5JSH3 913 aa11.13□□□□□ -0.63
TRERF1-204ENST00000372922 LRCH2Q5VUJ6 765 aa11.13□□□□□ -0.63
TRERF1-204ENST00000372922 MIPOL1Q8TD10 442 aa11.13□□□□□ -0.63
TRERF1-204ENST00000372922 FBF1Q8TES7 1133 aa11.13□□□□□ -0.63
TRERF1-204ENST00000372922 ZSWIM4Q9H7M6 989 aa11.13□□□□□ -0.63
TRERF1-204ENST00000372922 GPHNQ9NQX3 736 aaPredicted RBP11.13□□□□□ -0.63
TRERF1-204ENST00000372922 HELLSQ9NRZ9 838 aa11.13□□□□□ -0.63
TRERF1-204ENST00000372922 BTG4Q9NY30 223 aa11.13□□□□□ -0.63
TRERF1-204ENST00000372922 UFL1O94874 794 aa11.13□□□□□ -0.63
TRERF1-204ENST00000372922 F13A1P00488 732 aa11.13□□□□□ -0.63
TRERF1-204ENST00000372922 EIF6P56537 245 aaKnown RBP11.13□□□□□ -0.63
TRERF1-204ENST00000372922 SEPT14Q6ZU15 432 aa11.13□□□□□ -0.63
TRERF1-204ENST00000372922 USP48Q86UV5 1035 aa11.13□□□□□ -0.63
TRERF1-204ENST00000372922 CCDC42Q96M95 316 aa11.13□□□□□ -0.63
TRERF1-204ENST00000372922 HCLS1P14317 486 aaPredicted RBP11.13□□□□□ -0.63
TRERF1-204ENST00000372922 SP4Q02446 784 aa11.13□□□□□ -0.63
TRERF1-204ENST00000372922 UBXN1Q04323 297 aa11.13□□□□□ -0.63
TRERF1-204ENST00000372922 AOPEPQ8N6M6 819 aa11.13□□□□□ -0.63
TRERF1-204ENST00000372922 CCNL1Q9UK58 526 aaPredicted RBP11.13□□□□□ -0.63
TRERF1-204ENST00000372922 ZFYVE9O95405 1425 aa11.13□□□□□ -0.63
TRERF1-204ENST00000372922 RFX1P22670 979 aa11.13□□□□□ -0.63
TRERF1-204ENST00000372922 PPP1R2P41236 205 aa11.13□□□□□ -0.63
TRERF1-204ENST00000372922 SMTNP53814 917 aa11.13□□□□□ -0.63
TRERF1-204ENST00000372922 AKNAD1Q5T1N1 836 aa11.13□□□□□ -0.63
TRERF1-204ENST00000372922 DHX32Q7L7V1 743 aaKnown RBP11.13□□□□□ -0.63
TRERF1-204ENST00000372922 ODF2LQ9ULJ1 636 aa11.13□□□□□ -0.63
TRERF1-204ENST00000372922 STK24Q9Y6E0 443 aa11.13□□□□□ -0.63
TRERF1-204ENST00000372922 NPATQ14207 1427 aa11.13□□□□□ -0.63
TRERF1-204ENST00000372922 THOC2Q8NI27 1593 aaKnown RBP11.13□□□□□ -0.63
TRERF1-204ENST00000372922 RAD50Q92878 1312 aa11.13□□□□□ -0.63
TRERF1-204ENST00000372922 NCKAP5LQ9HCH0 1330 aa11.13□□□□□ -0.63
TRERF1-204ENST00000372922 DKC1O60832 514 aaKnown RBP eCLIP11.13□□□□□ -0.63
TRERF1-204ENST00000372922 CREB3L3Q68CJ9 461 aa11.13□□□□□ -0.63
TRERF1-204ENST00000372922 GBP6Q6ZN66 633 aa11.13□□□□□ -0.63
TRERF1-204ENST00000372922 SV2BQ7L1I2 683 aa11.13□□□□□ -0.63
TRERF1-204ENST00000372922 KIFAP3Q92845 792 aa11.13□□□□□ -0.63
TRERF1-204ENST00000372922 FNBP1Q96RU3 617 aa11.13□□□□□ -0.63
TRERF1-204ENST00000372922 GLT8D2Q9H1C3 349 aa11.13□□□□□ -0.63
TRERF1-204ENST00000372922 IQUBQ8NA54 791 aa11.12□□□□□ -0.63
TRERF1-204ENST00000372922 GGA1Q9UJY5 639 aa11.12□□□□□ -0.63
TRERF1-204ENST00000372922 OPA1O60313 960 aa11.12□□□□□ -0.63
TRERF1-204ENST00000372922 TUBB4AP04350 444 aa11.12□□□□□ -0.63
TRERF1-204ENST00000372922 APOBRQ0VD83 1088 aa11.12□□□□□ -0.63
TRERF1-204ENST00000372922 HSP90AA4PQ58FG1 418 aa11.12□□□□□ -0.63
TRERF1-204ENST00000372922 SKAP1Q86WV1 359 aa11.12□□□□□ -0.63
TRERF1-204ENST00000372922 SUPT20HQ8NEM7 779 aa11.12□□□□□ -0.63
TRERF1-204ENST00000372922 FAM200AQ8TCP9 573 aa11.12□□□□□ -0.63
TRERF1-204ENST00000372922 IP6K1Q92551 441 aa11.12□□□□□ -0.63
TRERF1-204ENST00000372922 JAKMIP2Q96AA8 810 aa11.12□□□□□ -0.63
TRERF1-204ENST00000372922 TTC14Q96N46 770 aa11.12□□□□□ -0.63
TRERF1-204ENST00000372922 SAP30BPQ9UHR5 308 aaKnown RBP11.12□□□□□ -0.63
TRERF1-204ENST00000372922 ATP6V0A2Q9Y487 856 aa11.12□□□□□ -0.63
TRERF1-204ENST00000372922 FAM169AQ9Y6X4 670 aa11.12□□□□□ -0.63
TRERF1-204ENST00000372922 EPB41P11171 864 aaKnown RBP11.12□□□□□ -0.63
TRERF1-204ENST00000372922 HIBADHP31937 336 aaKnown RBP11.12□□□□□ -0.63
TRERF1-204ENST00000372922 CWF19L2Q2TBE0 894 aaKnown RBP11.12□□□□□ -0.63
TRERF1-204ENST00000372922 BICC1Q9H694 974 aaKnown RBP11.12□□□□□ -0.63
TRERF1-204ENST00000372922 GPATCH8Q9UKJ3 1502 aaKnown RBP11.12□□□□□ -0.63
TRERF1-204ENST00000372922 YTHDC2Q9H6S0 1430 aaKnown RBP11.12□□□□□ -0.63
TRERF1-204ENST00000372922 IVNS1ABPQ9Y6Y0 642 aa11.12□□□□□ -0.63
TRERF1-204ENST00000372922 SYT1P21579 422 aa11.11□□□□□ -0.63
TRERF1-204ENST00000372922 CFAP58Q5T655 872 aa11.11□□□□□ -0.63
TRERF1-204ENST00000372922 SKILP12757 684 aa11.11□□□□□ -0.63
TRERF1-204ENST00000372922 TUBB4BP68371 445 aa11.11□□□□□ -0.63
TRERF1-204ENST00000372922 PUM3Q15397 648 aaKnown RBP11.11□□□□□ -0.63
TRERF1-204ENST00000372922 IFT74Q96LB3 600 aa11.11□□□□□ -0.63
TRERF1-204ENST00000372922 TSGA10Q9BZW7 698 aa11.11□□□□□ -0.63
TRERF1-204ENST00000372922 DACT1Q9NYF0 836 aa11.11□□□□□ -0.63
TRERF1-204ENST00000372922 POLKQ9UBT6 870 aa11.11□□□□□ -0.63
TRERF1-204ENST00000372922 H0YIN7 160 aa11.11□□□□□ -0.63
TRERF1-204ENST00000372922 DIXDC1Q155Q3 683 aa11.11□□□□□ -0.63
TRERF1-204ENST00000372922 CHST3Q7LGC8 479 aa11.11□□□□□ -0.63
TRERF1-204ENST00000372922 STX10O60499 249 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms