RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 SPATA5Q8NB90 893 aa11.74□□□□□ -0.53
PRPF38B-203ENST00000370025 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.74□□□□□ -0.53
PRPF38B-203ENST00000370025 SMC3Q9UQE7 1217 aa11.74□□□□□ -0.53
PRPF38B-203ENST00000370025 V9GYY5 206 aaPredicted RBP11.74□□□□□ -0.53
PRPF38B-203ENST00000370025 ARAP2Q8WZ64 1704 aa11.74□□□□□ -0.53
PRPF38B-203ENST00000370025 C3orf67Q6ZVT6 689 aa11.74□□□□□ -0.53
PRPF38B-203ENST00000370025 TAF6LQ9Y6J9 622 aa11.74□□□□□ -0.53
PRPF38B-203ENST00000370025 ADD2P35612 726 aa11.73□□□□□ -0.53
PRPF38B-203ENST00000370025 ZFP91Q96JP5 570 aaPredicted RBP11.73□□□□□ -0.53
PRPF38B-203ENST00000370025 LRRC4BQ9NT99 713 aa11.73□□□□□ -0.53
PRPF38B-203ENST00000370025 SNAP23O00161 211 aa11.73□□□□□ -0.53
PRPF38B-203ENST00000370025 UBE3CQ15386 1083 aa11.73□□□□□ -0.53
PRPF38B-203ENST00000370025 PIBF1Q8WXW3 757 aa11.73□□□□□ -0.53
PRPF38B-203ENST00000370025 PRIMPOLQ96LW4 560 aa11.73□□□□□ -0.53
PRPF38B-203ENST00000370025 PIH1D3Q9NQM4 214 aaKnown RBP11.73□□□□□ -0.53
PRPF38B-203ENST00000370025 TRIM37O94972 964 aa11.73□□□□□ -0.53
PRPF38B-203ENST00000370025 AMIGO3Q86WK7 504 aa11.73□□□□□ -0.53
PRPF38B-203ENST00000370025 CCDC83Q8IWF9 413 aa11.73□□□□□ -0.53
PRPF38B-203ENST00000370025 RPS8P62241 208 aaKnown RBP11.72□□□□□ -0.53
PRPF38B-203ENST00000370025 MAP3K12Q12852 859 aa11.72□□□□□ -0.53
PRPF38B-203ENST00000370025 UBE4AQ14139 1066 aa11.72□□□□□ -0.53
PRPF38B-203ENST00000370025 PUS7LQ9H0K6 701 aaKnown RBP11.72□□□□□ -0.53
PRPF38B-203ENST00000370025 GNL3LQ9NVN8 582 aaKnown RBP11.72□□□□□ -0.53
PRPF38B-203ENST00000370025 BRD1O95696 1058 aa11.72□□□□□ -0.53
PRPF38B-203ENST00000370025 BCAMP50895 628 aa11.72□□□□□ -0.53
PRPF38B-203ENST00000370025 FOSBP53539 338 aa11.72□□□□□ -0.53
PRPF38B-203ENST00000370025 RASGRF1Q13972 1273 aa11.72□□□□□ -0.53
PRPF38B-203ENST00000370025 ZNF772Q68DY9 489 aaPredicted RBP11.72□□□□□ -0.53
PRPF38B-203ENST00000370025 C16orf45Q96MC5 204 aaPredicted RBP11.72□□□□□ -0.53
PRPF38B-203ENST00000370025 TCEANC2Q96MN5 208 aa11.72□□□□□ -0.53
PRPF38B-203ENST00000370025 COL24A1Q17RW2 1714 aa11.72□□□□□ -0.53
PRPF38B-203ENST00000370025 WDR33Q9C0J8 1336 aaKnown RBP11.72□□□□□ -0.53
PRPF38B-203ENST00000370025 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.72□□□□□ -0.53
PRPF38B-203ENST00000370025 GPAA1O43292 621 aa11.72□□□□□ -0.53
PRPF38B-203ENST00000370025 LARGE1O95461 756 aa11.72□□□□□ -0.53
PRPF38B-203ENST00000370025 ME3Q16798 604 aa11.72□□□□□ -0.53
PRPF38B-203ENST00000370025 IMMTQ16891 758 aaKnown RBP11.72□□□□□ -0.53
PRPF38B-203ENST00000370025 TPCN1Q9ULQ1 816 aa11.72□□□□□ -0.53
PRPF38B-203ENST00000370025 PYCARDQ9ULZ3 195 aa11.72□□□□□ -0.53
PRPF38B-203ENST00000370025 MINPP1Q9UNW1 487 aa11.72□□□□□ -0.53
PRPF38B-203ENST00000370025 CARMIL3Q8ND23 1372 aa11.71□□□□□ -0.53
PRPF38B-203ENST00000370025 IPO4Q8TEX9 1081 aaKnown RBP11.71□□□□□ -0.53
PRPF38B-203ENST00000370025 CELF1Q92879 486 aaKnown RBP11.71□□□□□ -0.53
PRPF38B-203ENST00000370025 BRWD3Q6RI45 1802 aa11.71□□□□□ -0.53
PRPF38B-203ENST00000370025 PDE6AP16499 860 aa11.71□□□□□ -0.53
PRPF38B-203ENST00000370025 RBM6P78332 1123 aaKnown RBP11.71□□□□□ -0.53
PRPF38B-203ENST00000370025 CAVIN4Q5BKX8 364 aa11.71□□□□□ -0.53
PRPF38B-203ENST00000370025 ZNF532Q9HCE3 1301 aa11.71□□□□□ -0.54
PRPF38B-203ENST00000370025 NFIXQ14938 502 aa11.71□□□□□ -0.54
PRPF38B-203ENST00000370025 DHX32Q7L7V1 743 aaKnown RBP11.71□□□□□ -0.54
PRPF38B-203ENST00000370025 CCDC24Q8N4L8 307 aa11.71□□□□□ -0.54
PRPF38B-203ENST00000370025 C4AP0C0L4 1744 aa11.7□□□□□ -0.54
PRPF38B-203ENST00000370025 IRX5P78411 483 aaPredicted RBP11.7□□□□□ -0.54
PRPF38B-203ENST00000370025 TOB2Q14106 344 aaPredicted RBP11.7□□□□□ -0.54
PRPF38B-203ENST00000370025 VPS37DQ86XT2 251 aa11.7□□□□□ -0.54
PRPF38B-203ENST00000370025 ANKRD2Q9GZV1 360 aa11.7□□□□□ -0.54
PRPF38B-203ENST00000370025 CASZ1Q86V15 1759 aa11.7□□□□□ -0.54
PRPF38B-203ENST00000370025 E7EWF7 191 aa11.7□□□□□ -0.54
PRPF38B-203ENST00000370025 Q6ZUG5 572 aa11.7□□□□□ -0.54
PRPF38B-203ENST00000370025 CNBD1Q8NA66 436 aa11.7□□□□□ -0.54
PRPF38B-203ENST00000370025 TAF1P21675 1872 aa11.7□□□□□ -0.54
PRPF38B-203ENST00000370025 FGAP02671 866 aa11.7□□□□□ -0.54
PRPF38B-203ENST00000370025 STOX1Q6ZVD7 989 aa11.7□□□□□ -0.54
PRPF38B-203ENST00000370025 NECAB1Q8N987 351 aa11.7□□□□□ -0.54
PRPF38B-203ENST00000370025 AIDAQ96BJ3 306 aa11.7□□□□□ -0.54
PRPF38B-203ENST00000370025 WWC3Q9ULE0 1092 aa11.7□□□□□ -0.54
PRPF38B-203ENST00000370025 GJB2P29033 226 aa11.69□□□□□ -0.54
PRPF38B-203ENST00000370025 COL9A3Q14050 684 aaPredicted RBP11.69□□□□□ -0.54
PRPF38B-203ENST00000370025 TTLL5Q6EMB2 1281 aa11.69□□□□□ -0.54
PRPF38B-203ENST00000370025 DRC7Q8IY82 874 aa11.69□□□□□ -0.54
PRPF38B-203ENST00000370025 APPP05067 770 aa11.69□□□□□ -0.54
PRPF38B-203ENST00000370025 MAGEB6Q8N7X4 407 aa11.69□□□□□ -0.54
PRPF38B-203ENST00000370025 LRP2BPQ9P2M1 347 aa11.69□□□□□ -0.54
PRPF38B-203ENST00000370025 MYO5AQ9Y4I1 1855 aaKnown RBP11.69□□□□□ -0.54
PRPF38B-203ENST00000370025 ZNF213O14771 459 aa11.68□□□□□ -0.54
PRPF38B-203ENST00000370025 STX6O43752 255 aa11.68□□□□□ -0.54
PRPF38B-203ENST00000370025 GYG1P46976 350 aa11.68□□□□□ -0.54
PRPF38B-203ENST00000370025 TCRBV5S4A2TA0A5A2 114 aa11.68□□□□□ -0.54
PRPF38B-203ENST00000370025 GIMAP6Q6P9H5 292 aa11.68□□□□□ -0.54
PRPF38B-203ENST00000370025 FBXW7Q969H0 707 aa11.68□□□□□ -0.54
PRPF38B-203ENST00000370025 ST7Q9NRC1 585 aa11.68□□□□□ -0.54
PRPF38B-203ENST00000370025 UBR3Q6ZT12 1888 aa11.68□□□□□ -0.54
PRPF38B-203ENST00000370025 COL4A1P02462 1669 aa11.68□□□□□ -0.54
PRPF38B-203ENST00000370025 ZNF804BA4D1E1 1349 aa11.67□□□□□ -0.54
PRPF38B-203ENST00000370025 SYT1P21579 422 aa11.67□□□□□ -0.54
PRPF38B-203ENST00000370025 HAND2P61296 217 aa11.67□□□□□ -0.54
PRPF38B-203ENST00000370025 STK3Q13188 491 aa11.67□□□□□ -0.54
PRPF38B-203ENST00000370025 TXNRD1Q16881 649 aa11.67□□□□□ -0.54
PRPF38B-203ENST00000370025 BRF1Q92994 677 aa11.67□□□□□ -0.54
PRPF38B-203ENST00000370025 DENND2AQ9ULE3 1009 aa11.67□□□□□ -0.54
PRPF38B-203ENST00000370025 FOXP2O15409 715 aa11.67□□□□□ -0.54
PRPF38B-203ENST00000370025 PPFIA3O75145 1194 aa11.67□□□□□ -0.54
PRPF38B-203ENST00000370025 MBD3O95983 291 aa11.67□□□□□ -0.54
PRPF38B-203ENST00000370025 GYS1P13807 737 aa11.67□□□□□ -0.54
PRPF38B-203ENST00000370025 EXOSC10Q01780 885 aaKnown RBP11.67□□□□□ -0.54
PRPF38B-203ENST00000370025 IQSEC3Q9UPP2 1182 aaPredicted RBP11.67□□□□□ -0.54
PRPF38B-203ENST00000370025 LAMA4Q16363 1823 aa11.67□□□□□ -0.54
PRPF38B-203ENST00000370025 A0A0G2JLW4 131 aa11.67□□□□□ -0.54
PRPF38B-203ENST00000370025 FIBPO43427 364 aa11.67□□□□□ -0.54
PRPF38B-203ENST00000370025 ZSCAN22P10073 491 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms