RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 CPLX2Q6PUV4 134 aaKnown RBP16.62■□□□□ 0.25
CD48-201ENST00000368045 LRRC8AQ8IWT6 810 aa16.62■□□□□ 0.25
CD48-201ENST00000368045 CCDC144CPQ8IYA2 1237 aa16.62■□□□□ 0.25
CD48-201ENST00000368045 PIGBQ92521 554 aa16.62■□□□□ 0.25
CD48-201ENST00000368045 KIAA1468Q9P260 1216 aa16.62■□□□□ 0.25
CD48-201ENST00000368045 ANGEL1Q9UNK9 670 aaKnown RBP16.62■□□□□ 0.25
CD48-201ENST00000368045 ABCA3Q99758 1704 aa16.62■□□□□ 0.25
CD48-201ENST00000368045 CMA1P23946 247 aa16.61■□□□□ 0.25
CD48-201ENST00000368045 ALX1Q15699 326 aa16.61■□□□□ 0.25
CD48-201ENST00000368045 VGLL2Q8N8G2 317 aa16.61■□□□□ 0.25
CD48-201ENST00000368045 BCL2L12Q9HB09 334 aa16.61■□□□□ 0.25
CD48-201ENST00000368045 KCND1Q9NSA2 647 aa16.61■□□□□ 0.25
CD48-201ENST00000368045 SLAIN2Q9P270 581 aa16.61■□□□□ 0.25
CD48-201ENST00000368045 IMPACTQ9P2X3 320 aa16.61■□□□□ 0.25
CD48-201ENST00000368045 ZNF330Q9Y3S2 320 aaPredicted RBP16.61■□□□□ 0.25
CD48-201ENST00000368045 CLIC4Q9Y696 253 aa16.61■□□□□ 0.25
CD48-201ENST00000368045 ARID4AP29374 1257 aaPredicted RBP16.61■□□□□ 0.25
CD48-201ENST00000368045 NDUFA8P51970 172 aa16.61■□□□□ 0.25
CD48-201ENST00000368045 ANO1Q5XXA6 986 aa16.61■□□□□ 0.25
CD48-201ENST00000368045 AOPEPQ8N6M6 819 aa16.61■□□□□ 0.25
CD48-201ENST00000368045 TMEM87BQ96K49 555 aa16.61■□□□□ 0.25
CD48-201ENST00000368045 STRN4Q9NRL3 753 aa16.61■□□□□ 0.25
CD48-201ENST00000368045 CNNM1Q9NRU3 951 aa16.61■□□□□ 0.25
CD48-201ENST00000368045 ASAP1Q9ULH1 1129 aa16.61■□□□□ 0.25
CD48-201ENST00000368045 TBC1D2BQ9UPU7 963 aa16.61■□□□□ 0.25
CD48-201ENST00000368045 XIRP1Q702N8 1843 aaKnown RBP16.61■□□□□ 0.25
CD48-201ENST00000368045 SH2B2O14492 632 aaPredicted RBP16.6■□□□□ 0.25
CD48-201ENST00000368045 TNNT1P13805 278 aa16.6■□□□□ 0.25
CD48-201ENST00000368045 SLC9C2Q5TAH2 1124 aa16.6■□□□□ 0.25
CD48-201ENST00000368045 ANKRD7Q92527 254 aa16.6■□□□□ 0.25
CD48-201ENST00000368045 AK7Q96M32 723 aa16.6■□□□□ 0.25
CD48-201ENST00000368045 TIGD1Q96MW7 591 aa16.6■□□□□ 0.25
CD48-201ENST00000368045 GREM2Q9H772 168 aa16.6■□□□□ 0.25
CD48-201ENST00000368045 A0A1B0GVL5 298 aa16.59■□□□□ 0.25
CD48-201ENST00000368045 ERVV-1B6SEH8 477 aa16.59■□□□□ 0.25
CD48-201ENST00000368045 TPM4P67936 248 aa16.59■□□□□ 0.25
CD48-201ENST00000368045 SLC39A14Q15043 492 aa16.59■□□□□ 0.25
CD48-201ENST00000368045 TPD52L1Q16890 204 aaPredicted RBP16.59■□□□□ 0.25
CD48-201ENST00000368045 OTUD7BQ6GQQ9 843 aa16.59■□□□□ 0.25
CD48-201ENST00000368045 PI16Q6UXB8 463 aa16.59■□□□□ 0.25
CD48-201ENST00000368045 JMYQ8N9B5 988 aa16.59■□□□□ 0.25
CD48-201ENST00000368045 CCDC85AQ96PX6 553 aaPredicted RBP16.59■□□□□ 0.25
CD48-201ENST00000368045 IRS4O14654 1257 aaPredicted RBP16.59■□□□□ 0.25
CD48-201ENST00000368045 PDE8AO60658 829 aa16.59■□□□□ 0.25
CD48-201ENST00000368045 PDE8BO95263 885 aa16.59■□□□□ 0.25
CD48-201ENST00000368045 POLR3DP05423 398 aaPredicted RBP16.59■□□□□ 0.25
CD48-201ENST00000368045 SLC3A2P08195 630 aaKnown RBP16.59■□□□□ 0.25
CD48-201ENST00000368045 METAP2P50579 478 aaKnown RBP eCLIP16.59■□□□□ 0.25
CD48-201ENST00000368045 NLRP12P59046 1061 aa16.59■□□□□ 0.25
CD48-201ENST00000368045 AXDND1Q5T1B0 1012 aaPredicted RBP16.59■□□□□ 0.25
CD48-201ENST00000368045 NBPF3Q9H094 633 aa16.59■□□□□ 0.25
CD48-201ENST00000368045 OSBPL5Q9H0X9 879 aaPredicted RBP16.59■□□□□ 0.25
CD48-201ENST00000368045 LRP6O75581 1613 aa16.58■□□□□ 0.24
CD48-201ENST00000368045 PPFIA3O75145 1194 aa16.58■□□□□ 0.24
CD48-201ENST00000368045 PPP6R2O75170 966 aa16.58■□□□□ 0.24
CD48-201ENST00000368045 CYP19A1P11511 503 aaPredicted RBP16.58■□□□□ 0.24
CD48-201ENST00000368045 PDE6AP16499 860 aa16.58■□□□□ 0.24
CD48-201ENST00000368045 TBC1D10CQ8IV04 446 aa16.58■□□□□ 0.24
CD48-201ENST00000368045 C16orf45Q96MC5 204 aaPredicted RBP16.58■□□□□ 0.24
CD48-201ENST00000368045 PIH1D3Q9NQM4 214 aaKnown RBP16.58■□□□□ 0.24
CD48-201ENST00000368045 MYH7P12883 1935 aa16.58■□□□□ 0.24
CD48-201ENST00000368045 LRP5O75197 1615 aa16.58■□□□□ 0.24
CD48-201ENST00000368045 NEDD4P46934 1319 aa16.58■□□□□ 0.24
CD48-201ENST00000368045 MROH5Q6ZUA9 1318 aa16.58■□□□□ 0.24
CD48-201ENST00000368045 FAM237AA0A1B0GTK4 181 aa16.57■□□□□ 0.24
CD48-201ENST00000368045 KIF28PB7ZC32 967 aa16.57■□□□□ 0.24
CD48-201ENST00000368045 ZNF202O95125 648 aa16.57■□□□□ 0.24
CD48-201ENST00000368045 PUM3Q15397 648 aaKnown RBP16.57■□□□□ 0.24
CD48-201ENST00000368045 HLFQ16534 295 aa16.57■□□□□ 0.24
CD48-201ENST00000368045 SGMS1Q86VZ5 419 aa16.57■□□□□ 0.24
CD48-201ENST00000368045 LPIN2Q92539 896 aa16.57■□□□□ 0.24
CD48-201ENST00000368045 TSC1Q92574 1164 aa16.57■□□□□ 0.24
CD48-201ENST00000368045 ALG1Q9BT22 464 aa16.57■□□□□ 0.24
CD48-201ENST00000368045 STK36Q9NRP7 1315 aa16.57■□□□□ 0.24
CD48-201ENST00000368045 TCRBV5S4A2TA0A5A2 114 aa16.56■□□□□ 0.24
CD48-201ENST00000368045 CCDC69A6NI79 296 aa16.56■□□□□ 0.24
CD48-201ENST00000368045 KIF2AO00139 706 aaPredicted RBP16.56■□□□□ 0.24
CD48-201ENST00000368045 SKILP12757 684 aa16.56■□□□□ 0.24
CD48-201ENST00000368045 CCDC102BQ68D86 513 aa16.56■□□□□ 0.24
CD48-201ENST00000368045 APOA5Q6Q788 366 aa16.56■□□□□ 0.24
CD48-201ENST00000368045 CCDC150Q8NCX0 1101 aa16.56■□□□□ 0.24
CD48-201ENST00000368045 TRMT112Q9UI30 125 aaKnown RBP16.56■□□□□ 0.24
CD48-201ENST00000368045 BCL9O00512 1426 aa16.56■□□□□ 0.24
CD48-201ENST00000368045 ZNF532Q9HCE3 1301 aa16.56■□□□□ 0.24
CD48-201ENST00000368045 C4AP0C0L4 1744 aa16.56■□□□□ 0.24
CD48-201ENST00000368045 C4BP0C0L5 1744 aa16.56■□□□□ 0.24
CD48-201ENST00000368045 IKBKBO14920 756 aa16.56■□□□□ 0.24
CD48-201ENST00000368045 IDH1O75874 414 aaKnown RBP16.56■□□□□ 0.24
CD48-201ENST00000368045 PFKFB1P16118 471 aa16.56■□□□□ 0.24
CD48-201ENST00000368045 FGFR2P21802 821 aa16.56■□□□□ 0.24
CD48-201ENST00000368045 GPTP24298 496 aa16.56■□□□□ 0.24
CD48-201ENST00000368045 LIFRP42702 1097 aa16.56■□□□□ 0.24
CD48-201ENST00000368045 CCZ1BP86790 482 aa16.56■□□□□ 0.24
CD48-201ENST00000368045 CCZ1P86791 482 aaPredicted RBP16.56■□□□□ 0.24
CD48-201ENST00000368045 CYB5R4Q7L1T6 521 aa16.56■□□□□ 0.24
CD48-201ENST00000368045 PDCL2Q8N4E4 241 aa16.56■□□□□ 0.24
CD48-201ENST00000368045 CCDC112Q8NEF3 446 aa16.56■□□□□ 0.24
CD48-201ENST00000368045 STRBPQ96SI9 672 aaKnown RBP16.56■□□□□ 0.24
CD48-201ENST00000368045 NID2Q14112 1375 aa16.55■□□□□ 0.24
CD48-201ENST00000368045 AKAP11Q9UKA4 1901 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms