RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 METP08581 1390 aa18.77■□□□□ 0.6
SCAF8-201ENST00000367178 GOLGA6L7A0A1B0GV03 622 aa18.77■□□□□ 0.6
SCAF8-201ENST00000367178 SKILP12757 684 aa18.77■□□□□ 0.6
SCAF8-201ENST00000367178 ATL3Q6DD88 541 aa18.77■□□□□ 0.6
SCAF8-201ENST00000367178 NDUFB9Q9Y6M9 179 aa18.77■□□□□ 0.6
SCAF8-201ENST00000367178 CCDC24Q8N4L8 307 aa18.77■□□□□ 0.59
SCAF8-201ENST00000367178 EHBP1Q8NDI1 1231 aa18.77■□□□□ 0.59
SCAF8-201ENST00000367178 EZRP15311 586 aaKnown RBP18.76■□□□□ 0.59
SCAF8-201ENST00000367178 CYLC1P35663 651 aaPredicted RBP18.76■□□□□ 0.59
SCAF8-201ENST00000367178 ADGBQ8N7X0 1667 aa18.76■□□□□ 0.59
SCAF8-201ENST00000367178 PRDM1O75626 825 aa18.76■□□□□ 0.59
SCAF8-201ENST00000367178 PLS1Q14651 629 aa18.76■□□□□ 0.59
SCAF8-201ENST00000367178 IQUBQ8NA54 791 aa18.76■□□□□ 0.59
SCAF8-201ENST00000367178 CCDC113Q9H0I3 377 aa18.76■□□□□ 0.59
SCAF8-201ENST00000367178 JADE2Q9NQC1 790 aa18.76■□□□□ 0.59
SCAF8-201ENST00000367178 USP21Q9UK80 565 aa18.76■□□□□ 0.59
SCAF8-201ENST00000367178 USP44Q9H0E7 712 aa18.76■□□□□ 0.59
SCAF8-201ENST00000367178 MROH5Q6ZUA9 1318 aa18.76■□□□□ 0.59
SCAF8-201ENST00000367178 HLTFQ14527 1009 aaKnown RBP eCLIP18.76■□□□□ 0.593e-7■■■■□ 22
SCAF8-201ENST00000367178 FERMT2Q96AC1 680 aa18.76■□□□□ 0.59
SCAF8-201ENST00000367178 GCC2Q8IWJ2 1684 aa18.76■□□□□ 0.59
SCAF8-201ENST00000367178 IFFO1Q0D2I5 559 aa18.75■□□□□ 0.59
SCAF8-201ENST00000367178 SPATA31E1Q6ZUB1 1445 aa18.75■□□□□ 0.59
SCAF8-201ENST00000367178 MYO5CQ9NQX4 1742 aa18.75■□□□□ 0.59
SCAF8-201ENST00000367178 ABCC4O15439 1325 aa18.75■□□□□ 0.59
SCAF8-201ENST00000367178 ABCA8O94911 1581 aa18.75■□□□□ 0.59
SCAF8-201ENST00000367178 XRCC6P12956 609 aaKnown RBP eCLIP18.75■□□□□ 0.596e-8■□□□□ 8.2
SCAF8-201ENST00000367178 B4DLN1 442 aa18.75■□□□□ 0.59
SCAF8-201ENST00000367178 ZAP70P43403 619 aa18.75■□□□□ 0.59
SCAF8-201ENST00000367178 MRPL12P52815 198 aaKnown RBP18.75■□□□□ 0.59
SCAF8-201ENST00000367178 CEP135Q66GS9 1140 aa18.75■□□□□ 0.59
SCAF8-201ENST00000367178 KIF24Q5T7B8 1368 aa18.75■□□□□ 0.59
SCAF8-201ENST00000367178 RILPL1Q5EBL4 403 aa18.74■□□□□ 0.59
SCAF8-201ENST00000367178 TBC1D5Q92609 795 aa18.74■□□□□ 0.59
SCAF8-201ENST00000367178 ZNF830Q96NB3 372 aaPredicted RBP18.74■□□□□ 0.59
SCAF8-201ENST00000367178 GOPCQ9HD26 462 aa18.74■□□□□ 0.59
SCAF8-201ENST00000367178 DEXIO95424 95 aa18.74■□□□□ 0.59
SCAF8-201ENST00000367178 HOOK3Q86VS8 718 aa18.74■□□□□ 0.59
SCAF8-201ENST00000367178 SPATA5Q8NB90 893 aa18.74■□□□□ 0.59
SCAF8-201ENST00000367178 STX17P56962 302 aa18.74■□□□□ 0.59
SCAF8-201ENST00000367178 IFI16Q16666 785 aaKnown RBP18.74■□□□□ 0.59
SCAF8-201ENST00000367178 DYDC1Q8WWB3 177 aa18.74■□□□□ 0.59
SCAF8-201ENST00000367178 DPP8Q6V1X1 898 aaPredicted RBP18.73■□□□□ 0.59
SCAF8-201ENST00000367178 LLPHQ9BRT6 129 aaKnown RBP18.73■□□□□ 0.59
SCAF8-201ENST00000367178 TAOK3Q9H2K8 898 aa18.73■□□□□ 0.59
SCAF8-201ENST00000367178 SH2D4AQ9H788 454 aa18.73■□□□□ 0.59
SCAF8-201ENST00000367178 NCOA5Q9HCD5 579 aaKnown RBP18.73■□□□□ 0.59
SCAF8-201ENST00000367178 POTEB2H3BUK9 544 aa18.73■□□□□ 0.59
SCAF8-201ENST00000367178 AATFQ9NY61 560 aaKnown RBP eCLIP18.73■□□□□ 0.59
SCAF8-201ENST00000367178 MAST3O60307 1309 aa18.73■□□□□ 0.59
SCAF8-201ENST00000367178 PLEKHG1Q9ULL1 1385 aa18.73■□□□□ 0.59
SCAF8-201ENST00000367178 EFCAB6Q5THR3 1501 aa18.73■□□□□ 0.59
SCAF8-201ENST00000367178 ATP5JP18859 108 aa18.73■□□□□ 0.59
SCAF8-201ENST00000367178 SSH3Q8TE77 659 aa18.73■□□□□ 0.59
SCAF8-201ENST00000367178 TCHPQ9BT92 498 aa18.73■□□□□ 0.59
SCAF8-201ENST00000367178 FAM135BQ49AJ0 1406 aa18.73■□□□□ 0.59
SCAF8-201ENST00000367178 CFAP74Q9C0B2 1584 aa18.73■□□□□ 0.59
SCAF8-201ENST00000367178 TMEM94Q12767 1356 aa18.73■□□□□ 0.59
SCAF8-201ENST00000367178 LETM2Q2VYF4 491 aa18.73■□□□□ 0.59
SCAF8-201ENST00000367178 GTPBP4Q9BZE4 634 aaKnown RBP18.73■□□□□ 0.59
SCAF8-201ENST00000367178 ZSWIM4Q9H7M6 989 aa18.73■□□□□ 0.59
SCAF8-201ENST00000367178 CGNQ9P2M7 1197 aaKnown RBP18.73■□□□□ 0.59
SCAF8-201ENST00000367178 HS2ST1Q7LGA3 356 aa18.72■□□□□ 0.59
SCAF8-201ENST00000367178 GPCPD1Q9NPB8 672 aa18.72■□□□□ 0.59
SCAF8-201ENST00000367178 KDM5AP29375 1690 aaKnown RBP18.72■□□□□ 0.59
SCAF8-201ENST00000367178 VWA3AA6NCI4 1184 aa18.72■□□□□ 0.59
SCAF8-201ENST00000367178 ZNF174Q15697 407 aa18.72■□□□□ 0.59
SCAF8-201ENST00000367178 SPECC1Q5M775 1068 aa18.72■□□□□ 0.59
SCAF8-201ENST00000367178 CERS3Q8IU89 383 aa18.72■□□□□ 0.59
SCAF8-201ENST00000367178 A0A1B0GVL5 298 aa18.72■□□□□ 0.59
SCAF8-201ENST00000367178 PHACTR2O75167 634 aa18.72■□□□□ 0.59
SCAF8-201ENST00000367178 FAM13AO94988 1023 aa18.72■□□□□ 0.59
SCAF8-201ENST00000367178 BICDL2A1A5D9 508 aa18.72■□□□□ 0.59
SCAF8-201ENST00000367178 PLIN2Q99541 437 aa18.72■□□□□ 0.59
SCAF8-201ENST00000367178 V9GY48 417 aaPredicted RBP18.72■□□□□ 0.59
SCAF8-201ENST00000367178 ZNF532Q9HCE3 1301 aa18.72■□□□□ 0.59
SCAF8-201ENST00000367178 PAXBP1Q9Y5B6 917 aa18.71■□□□□ 0.59
SCAF8-201ENST00000367178 MAGI2Q86UL8 1455 aa18.71■□□□□ 0.59
SCAF8-201ENST00000367178 RPS8P62241 208 aaKnown RBP18.71■□□□□ 0.59
SCAF8-201ENST00000367178 TTLL7Q6ZT98 887 aa18.71■□□□□ 0.59
SCAF8-201ENST00000367178 RNF123Q5XPI4 1314 aa18.71■□□□□ 0.59
SCAF8-201ENST00000367178 AATKQ6ZMQ8 1374 aa18.71■□□□□ 0.59
SCAF8-201ENST00000367178 H0YIN7 160 aa18.7■□□□□ 0.58
SCAF8-201ENST00000367178 PTGS1P23219 599 aa18.7■□□□□ 0.58
SCAF8-201ENST00000367178 EIF6P56537 245 aaKnown RBP18.7■□□□□ 0.58
SCAF8-201ENST00000367178 FAM160A1Q05DH4 1040 aa18.7■□□□□ 0.58
SCAF8-201ENST00000367178 KDRP35968 1356 aa18.7■□□□□ 0.58
SCAF8-201ENST00000367178 ERBB4Q15303 1308 aa18.7■□□□□ 0.58
SCAF8-201ENST00000367178 NAP1L4Q99733 375 aaKnown RBP18.7■□□□□ 0.58
SCAF8-201ENST00000367178 CTSWP56202 376 aa18.7■□□□□ 0.58
SCAF8-201ENST00000367178 ELP1O95163 1332 aa18.7■□□□□ 0.58
SCAF8-201ENST00000367178 GJA3Q9Y6H8 435 aa18.7■□□□□ 0.58
SCAF8-201ENST00000367178 IBTKQ9P2D0 1353 aaPredicted RBP18.69■□□□□ 0.58
SCAF8-201ENST00000367178 DIS3L2Q8IYB7 885 aaKnown RBP18.69■□□□□ 0.58
SCAF8-201ENST00000367178 ANO1Q5XXA6 986 aa18.69■□□□□ 0.58
SCAF8-201ENST00000367178 EDC3Q96F86 508 aaKnown RBP18.69■□□□□ 0.58
SCAF8-201ENST00000367178 DNAI1Q9UI46 699 aa18.69■□□□□ 0.58
SCAF8-201ENST00000367178 SAMD9LQ8IVG5 1584 aa18.69■□□□□ 0.58
SCAF8-201ENST00000367178 ERVK-7P63135 1459 aa18.69■□□□□ 0.58
SCAF8-201ENST00000367178 MLH3Q9UHC1 1453 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms