RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 HELLSQ9NRZ9 838 aa10.69□□□□□ -0.7
CALD1-202ENST00000361901 TAF6LQ9Y6J9 622 aa10.69□□□□□ -0.7
CALD1-202ENST00000361901 PRC1O43663 620 aa10.69□□□□□ -0.7
CALD1-202ENST00000361901 PRDM1O75626 825 aa10.69□□□□□ -0.7
CALD1-202ENST00000361901 RPS6KB1P23443 525 aa10.69□□□□□ -0.7
CALD1-202ENST00000361901 NCOA7Q8NI08 942 aa10.69□□□□□ -0.7
CALD1-202ENST00000361901 DEF6Q9H4E7 631 aa10.69□□□□□ -0.7
CALD1-202ENST00000361901 SALL3Q9BXA9 1300 aa10.68□□□□□ -0.7
CALD1-202ENST00000361901 B4E1Z4 1266 aa10.68□□□□□ -0.7
CALD1-202ENST00000361901 M0R2C6 588 aa10.68□□□□□ -0.7
CALD1-202ENST00000361901 CIAO1O76071 339 aa10.68□□□□□ -0.7
CALD1-202ENST00000361901 ATP2B2Q01814 1243 aa10.68□□□□□ -0.7
CALD1-202ENST00000361901 LRP10Q7Z4F1 713 aa10.68□□□□□ -0.7
CALD1-202ENST00000361901 CELF1Q92879 486 aaKnown RBP10.68□□□□□ -0.7
CALD1-202ENST00000361901 MROH5Q6ZUA9 1318 aa10.68□□□□□ -0.7
CALD1-202ENST00000361901 JAK2O60674 1132 aa10.68□□□□□ -0.7
CALD1-202ENST00000361901 TRIM28Q13263 835 aaKnown RBP10.68□□□□□ -0.7
CALD1-202ENST00000361901 OGFRQ9NZT2 677 aa10.68□□□□□ -0.7
CALD1-202ENST00000361901 RSPH14Q9UHP6 348 aa10.68□□□□□ -0.7
CALD1-202ENST00000361901 TPCN1Q9ULQ1 816 aa10.68□□□□□ -0.7
CALD1-202ENST00000361901 CAMTA2O94983 1202 aa10.68□□□□□ -0.7
CALD1-202ENST00000361901 FGAP02671 866 aa10.68□□□□□ -0.7
CALD1-202ENST00000361901 DNM1Q05193 864 aaKnown RBP10.68□□□□□ -0.7
CALD1-202ENST00000361901 CTDSPL2Q05D32 466 aa10.68□□□□□ -0.7
CALD1-202ENST00000361901 DHX32Q7L7V1 743 aaKnown RBP10.68□□□□□ -0.7
CALD1-202ENST00000361901 MAST3O60307 1309 aa10.67□□□□□ -0.7
CALD1-202ENST00000361901 RGPD1P0DJD0 1748 aa10.67□□□□□ -0.7
CALD1-202ENST00000361901 CASP7P55210 303 aa10.67□□□□□ -0.7
CALD1-202ENST00000361901 KRT85P78386 507 aa10.67□□□□□ -0.7
CALD1-202ENST00000361901 CAMK4Q16566 473 aa10.67□□□□□ -0.7
CALD1-202ENST00000361901 TMEM67Q5HYA8 995 aa10.67□□□□□ -0.7
CALD1-202ENST00000361901 POLR3DP05423 398 aaPredicted RBP10.67□□□□□ -0.7
CALD1-202ENST00000361901 HMGB1P09429 215 aaKnown RBP10.67□□□□□ -0.7
CALD1-202ENST00000361901 PDE6AP16499 860 aa10.67□□□□□ -0.7
CALD1-202ENST00000361901 MFSD6Q6ZSS7 791 aa10.67□□□□□ -0.7
CALD1-202ENST00000361901 BARGINQ6ZT62 677 aa10.67□□□□□ -0.7
CALD1-202ENST00000361901 FEZ1Q99689 392 aa10.67□□□□□ -0.7
CALD1-202ENST00000361901 BCL2L12Q9HB09 334 aa10.67□□□□□ -0.7
CALD1-202ENST00000361901 BCL9O00512 1426 aa10.67□□□□□ -0.7
CALD1-202ENST00000361901 LOC102724159A0A0B4J2E5 919 aa10.67□□□□□ -0.7
CALD1-202ENST00000361901 RPS6KA4O75676 772 aa10.67□□□□□ -0.7
CALD1-202ENST00000361901 HIBADHP31937 336 aaKnown RBP10.67□□□□□ -0.7
CALD1-202ENST00000361901 GABPB1Q06547 395 aaPredicted RBP10.67□□□□□ -0.7
CALD1-202ENST00000361901 PWP2Q15269 919 aaKnown RBP10.67□□□□□ -0.7
CALD1-202ENST00000361901 NOM1Q5C9Z4 860 aaKnown RBP10.67□□□□□ -0.7
CALD1-202ENST00000361901 SDR42E1Q8WUS8 393 aa10.67□□□□□ -0.7
CALD1-202ENST00000361901 SPATA32Q96LK8 384 aa10.67□□□□□ -0.7
CALD1-202ENST00000361901 MYL10Q9BUA6 226 aa10.67□□□□□ -0.7
CALD1-202ENST00000361901 PIH1D3Q9NQM4 214 aaKnown RBP10.67□□□□□ -0.7
CALD1-202ENST00000361901 E7EWF7 191 aa10.66□□□□□ -0.7
CALD1-202ENST00000361901 ZSCAN22P10073 491 aaPredicted RBP10.66□□□□□ -0.7
CALD1-202ENST00000361901 GPS2Q13227 327 aa10.66□□□□□ -0.7
CALD1-202ENST00000361901 RASGRF1Q13972 1273 aa10.66□□□□□ -0.7
CALD1-202ENST00000361901 ZNF34Q8IZ26 560 aa10.66□□□□□ -0.7
CALD1-202ENST00000361901 GPHNQ9NQX3 736 aaPredicted RBP10.66□□□□□ -0.7
CALD1-202ENST00000361901 NOLC1Q14978 699 aaKnown RBP eCLIP10.66□□□□□ -0.7
CALD1-202ENST00000361901 NECTIN1Q15223 517 aa10.66□□□□□ -0.7
CALD1-202ENST00000361901 OTUD7BQ6GQQ9 843 aa10.66□□□□□ -0.7
CALD1-202ENST00000361901 RIPOR2Q9Y4F9 1068 aa10.66□□□□□ -0.7
CALD1-202ENST00000361901 A0A0G2JLW4 131 aa10.66□□□□□ -0.7
CALD1-202ENST00000361901 MAGEB6P1A0A0J9YX57 407 aa10.66□□□□□ -0.7
CALD1-202ENST00000361901 UFL1O94874 794 aa10.66□□□□□ -0.7
CALD1-202ENST00000361901 ME1P48163 572 aa10.66□□□□□ -0.7
CALD1-202ENST00000361901 C10orf67Q8IYJ2 551 aa10.66□□□□□ -0.7
CALD1-202ENST00000361901 AATFQ9NY61 560 aaKnown RBP eCLIP10.66□□□□□ -0.7
CALD1-202ENST00000361901 PRKAB2O43741 272 aa10.65□□□□□ -0.7
CALD1-202ENST00000361901 CYP2E1P05181 493 aaPredicted RBP10.65□□□□□ -0.7
CALD1-202ENST00000361901 ZMYM1Q5SVZ6 1142 aa10.65□□□□□ -0.7
CALD1-202ENST00000361901 USP48Q86UV5 1035 aa10.65□□□□□ -0.7
CALD1-202ENST00000361901 ZSWIM6Q9HCJ5 1215 aa10.65□□□□□ -0.7
CALD1-202ENST00000361901 GPR108Q9NPR9 543 aa10.65□□□□□ -0.7
CALD1-202ENST00000361901 INCENPQ9NQS7 918 aa10.65□□□□□ -0.7
CALD1-202ENST00000361901 ORC3Q9UBD5 711 aaPredicted RBP10.65□□□□□ -0.7
CALD1-202ENST00000361901 SLC12A7Q9Y666 1083 aa10.65□□□□□ -0.7
CALD1-202ENST00000361901 STRCP1A6NGW2 1772 aa10.65□□□□□ -0.7
CALD1-202ENST00000361901 WTIPA6NIX2 430 aaPredicted RBP10.65□□□□□ -0.7
CALD1-202ENST00000361901 MBD3O95983 291 aa10.65□□□□□ -0.7
CALD1-202ENST00000361901 KRT222Q8N1A0 295 aa10.65□□□□□ -0.7
CALD1-202ENST00000361901 CWC15Q9P013 229 aaKnown RBP10.65□□□□□ -0.7
CALD1-202ENST00000361901 ZSCAN29Q8IWY8 852 aaPredicted RBP10.65□□□□□ -0.71
CALD1-202ENST00000361901 C8orf76Q96K31 380 aa10.65□□□□□ -0.71
CALD1-202ENST00000361901 RASSF4Q9H2L5 321 aa10.65□□□□□ -0.71
CALD1-202ENST00000361901 MKNK2Q9HBH9 465 aa10.65□□□□□ -0.71
CALD1-202ENST00000361901 NARFQ9UHQ1 456 aa10.65□□□□□ -0.71
CALD1-202ENST00000361901 GOLGA8AA7E2F4 631 aa10.64□□□□□ -0.71
CALD1-202ENST00000361901 CSF1RP07333 972 aa10.64□□□□□ -0.71
CALD1-202ENST00000361901 STK38Q15208 465 aa10.64□□□□□ -0.71
CALD1-202ENST00000361901 INTS4Q96HW7 963 aaKnown RBP10.64□□□□□ -0.71
CALD1-202ENST00000361901 F13A1P00488 732 aa10.64□□□□□ -0.71
CALD1-202ENST00000361901 SERPINB2P05120 415 aa10.64□□□□□ -0.71
CALD1-202ENST00000361901 METAP2P50579 478 aaKnown RBP eCLIP10.64□□□□□ -0.71
CALD1-202ENST00000361901 SAFBQ15424 915 aaKnown RBP eCLIP10.64□□□□□ -0.71
CALD1-202ENST00000361901 KLHL40Q2TBA0 621 aa10.64□□□□□ -0.71
CALD1-202ENST00000361901 SLC3A2P08195 630 aaKnown RBP10.63□□□□□ -0.71
CALD1-202ENST00000361901 RASSF8Q8NHQ8 419 aa10.63□□□□□ -0.71
CALD1-202ENST00000361901 MYCBPQ99417 103 aaPredicted RBP10.63□□□□□ -0.71
CALD1-202ENST00000361901 CDHR2Q9BYE9 1310 aa10.63□□□□□ -0.71
CALD1-202ENST00000361901 PTPDC1A2A3K4 754 aa10.63□□□□□ -0.71
CALD1-202ENST00000361901 PICALMQ13492 652 aa10.63□□□□□ -0.71
CALD1-202ENST00000361901 C3orf67Q6ZVT6 689 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms