RNA–Protein interactions for RNA: ENST00000361603.6

COL4A5-202, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS P3 TSL 2 BASIC

Gene COL4A5, Length 6,469 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-202ENST00000361603 DBNDD2Q9BQY9 259 aa13.02□□□□□ -0.33
COL4A5-202ENST00000361603 INO80Q9ULG1 1556 aaPredicted RBP13.02□□□□□ -0.33
COL4A5-202ENST00000361603 USP31Q70CQ4 1352 aa13.02□□□□□ -0.33
COL4A5-202ENST00000361603 MAP9Q49MG5 647 aa13.02□□□□□ -0.33
COL4A5-202ENST00000361603 KIF18AQ8NI77 898 aa13.02□□□□□ -0.33
COL4A5-202ENST00000361603 NUP88Q99567 741 aaPredicted RBP13.02□□□□□ -0.33
COL4A5-202ENST00000361603 CAMSAP1Q5T5Y3 1602 aa13.02□□□□□ -0.33
COL4A5-202ENST00000361603 IDEP14735 1019 aa13.01□□□□□ -0.33
COL4A5-202ENST00000361603 RAB3GAP1Q15042 981 aa13.01□□□□□ -0.33
COL4A5-202ENST00000361603 ZRSR2Q15696 482 aaKnown RBP13.01□□□□□ -0.33
COL4A5-202ENST00000361603 BEND3Q5T5X7 828 aa13.01□□□□□ -0.33
COL4A5-202ENST00000361603 WDR78Q5VTH9 848 aa13.01□□□□□ -0.33
COL4A5-202ENST00000361603 IQSEC3Q9UPP2 1182 aaPredicted RBP13.01□□□□□ -0.33
COL4A5-202ENST00000361603 TNNQ9UQP3 1299 aa13.01□□□□□ -0.33
COL4A5-202ENST00000361603 FAM196AQ6ZSG2 479 aa13.01□□□□□ -0.33
COL4A5-202ENST00000361603 NLGN1Q8N2Q7 840 aa13.01□□□□□ -0.33
COL4A5-202ENST00000361603 TFIP11Q9UBB9 837 aaKnown RBP13.01□□□□□ -0.33
COL4A5-202ENST00000361603 FAM200AQ8TCP9 573 aa13.01□□□□□ -0.33
COL4A5-202ENST00000361603 UQCRHLA0A096LP55 91 aa13.01□□□□□ -0.33
COL4A5-202ENST00000361603 DKC1O60832 514 aaKnown RBP eCLIP13.01□□□□□ -0.331e-5■■■■□ 25.7
COL4A5-202ENST00000361603 UQCRHP07919 91 aa13.01□□□□□ -0.33
COL4A5-202ENST00000361603 MADDQ8WXG6 1647 aa13.01□□□□□ -0.33
COL4A5-202ENST00000361603 ERVV-1B6SEH8 477 aa13.01□□□□□ -0.33
COL4A5-202ENST00000361603 EIF6P56537 245 aaKnown RBP13.01□□□□□ -0.33
COL4A5-202ENST00000361603 CCDC174Q6PII3 467 aa13.01□□□□□ -0.33
COL4A5-202ENST00000361603 KRI1Q8N9T8 703 aaKnown RBP13.01□□□□□ -0.33
COL4A5-202ENST00000361603 HELBQ8NG08 1087 aaPredicted RBP13.01□□□□□ -0.33
COL4A5-202ENST00000361603 PRR36Q9H6K5 1346 aa13□□□□□ -0.33
COL4A5-202ENST00000361603 SLC27A2O14975 620 aa13□□□□□ -0.33
COL4A5-202ENST00000361603 RPS8P62241 208 aaKnown RBP13□□□□□ -0.33
COL4A5-202ENST00000361603 APBB1IPQ7Z5R6 666 aaPredicted RBP13□□□□□ -0.33
COL4A5-202ENST00000361603 SYCP3Q8IZU3 236 aa13□□□□□ -0.33
COL4A5-202ENST00000361603 NECAB1Q8N987 351 aa13□□□□□ -0.33
COL4A5-202ENST00000361603 ANGEL1Q9UNK9 670 aaKnown RBP13□□□□□ -0.33
COL4A5-202ENST00000361603 COPRSQ9NQ92 184 aa13□□□□□ -0.33
COL4A5-202ENST00000361603 SAMM50Q9Y512 469 aa13□□□□□ -0.33
COL4A5-202ENST00000361603 F8W031 263 aaPredicted RBP13□□□□□ -0.33
COL4A5-202ENST00000361603 PLCD1P51178 756 aa13□□□□□ -0.33
COL4A5-202ENST00000361603 VEZTQ9HBM0 779 aa13□□□□□ -0.33
COL4A5-202ENST00000361603 ZNF853P0CG23 659 aa12.99□□□□□ -0.33
COL4A5-202ENST00000361603 HCLS1P14317 486 aaPredicted RBP12.99□□□□□ -0.33
COL4A5-202ENST00000361603 PAF1Q8N7H5 531 aa12.99□□□□□ -0.33
COL4A5-202ENST00000361603 MIGA1Q8NAN2 632 aa12.99□□□□□ -0.33
COL4A5-202ENST00000361603 TRIM47Q96LD4 638 aa12.99□□□□□ -0.33
COL4A5-202ENST00000361603 USP25Q9UHP3 1055 aa12.99□□□□□ -0.33
COL4A5-202ENST00000361603 SPATA31A3Q5VYP0 1347 aa12.99□□□□□ -0.33
COL4A5-202ENST00000361603 KRT13P13646 458 aa12.99□□□□□ -0.33
COL4A5-202ENST00000361603 CKAP2LQ8IYA6 745 aa12.99□□□□□ -0.33
COL4A5-202ENST00000361603 GPAA1O43292 621 aa12.99□□□□□ -0.33
COL4A5-202ENST00000361603 PAFAH1B1P43034 410 aa12.99□□□□□ -0.33
COL4A5-202ENST00000361603 DHX37Q8IY37 1157 aaKnown RBP12.99□□□□□ -0.33
COL4A5-202ENST00000361603 UBXN4Q92575 508 aa12.99□□□□□ -0.33
COL4A5-202ENST00000361603 CNKSR1Q969H4 720 aa12.99□□□□□ -0.33
COL4A5-202ENST00000361603 NAA15Q9BXJ9 866 aaKnown RBP12.99□□□□□ -0.33
COL4A5-202ENST00000361603 DIP2CQ9Y2E4 1556 aa12.99□□□□□ -0.33
COL4A5-202ENST00000361603 CASQ1P31415 396 aa12.98□□□□□ -0.33
COL4A5-202ENST00000361603 IQUBQ8NA54 791 aa12.98□□□□□ -0.33
COL4A5-202ENST00000361603 RRAGBQ5VZM2 374 aa12.98□□□□□ -0.33
COL4A5-202ENST00000361603 MPNDQ8N594 471 aa12.98□□□□□ -0.33
COL4A5-202ENST00000361603 DDX12PQ92771 950 aa12.98□□□□□ -0.33
COL4A5-202ENST00000361603 APOBRQ0VD83 1088 aa12.98□□□□□ -0.33
COL4A5-202ENST00000361603 UBE4AQ14139 1066 aa12.98□□□□□ -0.33
COL4A5-202ENST00000361603 USP44Q9H0E7 712 aa12.98□□□□□ -0.33
COL4A5-202ENST00000361603 NEBLO76041 1014 aa12.98□□□□□ -0.33
COL4A5-202ENST00000361603 PRPHP41219 470 aa12.98□□□□□ -0.33
COL4A5-202ENST00000361603 TNFAIP1Q13829 316 aa12.98□□□□□ -0.33
COL4A5-202ENST00000361603 GIGYF2Q6Y7W6 1299 aaKnown RBP12.98□□□□□ -0.33
COL4A5-202ENST00000361603 TBC1D5Q92609 795 aa12.98□□□□□ -0.33
COL4A5-202ENST00000361603 TNS3Q68CZ2 1445 aa12.98□□□□□ -0.33
COL4A5-202ENST00000361603 ZSCAN23Q3MJ62 389 aa12.98□□□□□ -0.33
COL4A5-202ENST00000361603 KIF4AO95239 1232 aa12.97□□□□□ -0.33
COL4A5-202ENST00000361603 ZNF521Q96K83 1311 aa12.97□□□□□ -0.33
COL4A5-202ENST00000361603 CFAP65Q6ZU64 1925 aaKnown RBP12.97□□□□□ -0.33
COL4A5-202ENST00000361603 RIMBP2O15034 1052 aa12.97□□□□□ -0.33
COL4A5-202ENST00000361603 APBA3O96018 575 aa12.97□□□□□ -0.33
COL4A5-202ENST00000361603 TIMM10P62072 90 aa12.97□□□□□ -0.33
COL4A5-202ENST00000361603 DTHD1Q6ZMT9 781 aa12.97□□□□□ -0.33
COL4A5-202ENST00000361603 USP48Q86UV5 1035 aa12.97□□□□□ -0.33
COL4A5-202ENST00000361603 ELP1O95163 1332 aa12.97□□□□□ -0.33
COL4A5-202ENST00000361603 LOC102724428A0A0B4J2F2 783 aa12.97□□□□□ -0.33
COL4A5-202ENST00000361603 HSPA4P34932 840 aa12.97□□□□□ -0.33
COL4A5-202ENST00000361603 SIK1P57059 783 aa12.97□□□□□ -0.33
COL4A5-202ENST00000361603 SKAP1Q86WV1 359 aa12.97□□□□□ -0.33
COL4A5-202ENST00000361603 PLVAPQ9BX97 442 aa12.97□□□□□ -0.33
COL4A5-202ENST00000361603 TTC12Q9H892 705 aaPredicted RBP12.97□□□□□ -0.33
COL4A5-202ENST00000361603 KRT25Q7Z3Z0 450 aa12.97□□□□□ -0.33
COL4A5-202ENST00000361603 ANKRD62A6NC57 917 aa12.97□□□□□ -0.33
COL4A5-202ENST00000361603 TUBB4BP68371 445 aa12.97□□□□□ -0.33
COL4A5-202ENST00000361603 SEPT7Q16181 437 aaKnown RBP12.97□□□□□ -0.33
COL4A5-202ENST00000361603 RBM26Q5T8P6 1007 aaKnown RBP12.97□□□□□ -0.33
COL4A5-202ENST00000361603 NIM1KQ8IY84 436 aa12.97□□□□□ -0.33
COL4A5-202ENST00000361603 TMOD4Q9NZQ9 345 aa12.97□□□□□ -0.33
COL4A5-202ENST00000361603 KCNG1Q9UIX4 513 aa12.97□□□□□ -0.33
COL4A5-202ENST00000361603 PICK1Q9NRD5 415 aa12.96□□□□□ -0.33
COL4A5-202ENST00000361603 LEMD3Q9Y2U8 911 aa12.96□□□□□ -0.33
COL4A5-202ENST00000361603 PNMA6EA0A0J9YXQ4 647 aa12.96□□□□□ -0.33
COL4A5-202ENST00000361603 CYLC1P35663 651 aaPredicted RBP12.96□□□□□ -0.33
COL4A5-202ENST00000361603 TDRD12Q587J7 1177 aaKnown RBP12.96□□□□□ -0.33
COL4A5-202ENST00000361603 TAOK3Q9H2K8 898 aa12.96□□□□□ -0.33
COL4A5-202ENST00000361603 STAP2Q9UGK3 403 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms