RNA–Protein interactions for RNA: ENST00000361490.8

HPS1-204, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS1, Length 3,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-204ENST00000361490 TXNRD3Q86VQ6 643 aa13.65□□□□□ -0.22
HPS1-204ENST00000361490 SPATA32Q96LK8 384 aa13.65□□□□□ -0.22
HPS1-204ENST00000361490 DSCC1Q9BVC3 393 aa13.65□□□□□ -0.22
HPS1-204ENST00000361490 DISP2A7MBM2 1401 aa13.65□□□□□ -0.22
HPS1-204ENST00000361490 PTPDC1A2A3K4 754 aa13.65□□□□□ -0.23
HPS1-204ENST00000361490 KRT85P78386 507 aa13.65□□□□□ -0.23
HPS1-204ENST00000361490 ZSCAN29Q8IWY8 852 aaPredicted RBP13.65□□□□□ -0.23
HPS1-204ENST00000361490 IFNL3Q8IZI9 196 aa13.65□□□□□ -0.23
HPS1-204ENST00000361490 IL27Q8NEV9 243 aa13.65□□□□□ -0.23
HPS1-204ENST00000361490 INTS4Q96HW7 963 aaKnown RBP13.65□□□□□ -0.23
HPS1-204ENST00000361490 ANKRD2Q9GZV1 360 aa13.65□□□□□ -0.23
HPS1-204ENST00000361490 MKNK2Q9HBH9 465 aa13.65□□□□□ -0.23
HPS1-204ENST00000361490 BSDC1Q9NW68 430 aaPredicted RBP13.65□□□□□ -0.23
HPS1-204ENST00000361490 EP400Q96L91 3159 aa13.64□□□□□ -0.23
HPS1-204ENST00000361490 KCPQ6ZWJ8 1503 aa13.64□□□□□ -0.23
HPS1-204ENST00000361490 GOLGA8AA7E2F4 631 aa13.64□□□□□ -0.23
HPS1-204ENST00000361490 PHKBQ93100 1093 aa13.64□□□□□ -0.23
HPS1-204ENST00000361490 KDM3BQ7LBC6 1761 aa13.64□□□□□ -0.23
HPS1-204ENST00000361490 F13A1P00488 732 aa13.64□□□□□ -0.23
HPS1-204ENST00000361490 LDHBP07195 334 aaKnown RBP13.64□□□□□ -0.23
HPS1-204ENST00000361490 METAP2P50579 478 aaKnown RBP eCLIP13.64□□□□□ -0.232e-7■■■□□ 14.6
HPS1-204ENST00000361490 GJB4Q9NTQ9 266 aa13.64□□□□□ -0.23
HPS1-204ENST00000361490 CACNA1FO60840 1977 aa13.64□□□□□ -0.23
HPS1-204ENST00000361490 ADD1P35611 737 aaKnown RBP13.63□□□□□ -0.23
HPS1-204ENST00000361490 ME1P48163 572 aa13.63□□□□□ -0.23
HPS1-204ENST00000361490 TM6SF1Q9BZW5 370 aa13.63□□□□□ -0.23
HPS1-204ENST00000361490 ZDHHC9Q9Y397 364 aa13.63□□□□□ -0.23
HPS1-204ENST00000361490 ABCC12Q96J65 1359 aa13.63□□□□□ -0.23
HPS1-204ENST00000361490 SCN11AQ9UI33 1791 aa13.63□□□□□ -0.23
HPS1-204ENST00000361490 USP17L12C9JPN9 530 aa13.63□□□□□ -0.23
HPS1-204ENST00000361490 USP17L21D6R901 530 aa13.63□□□□□ -0.23
HPS1-204ENST00000361490 PRKCSHP14314 528 aaPredicted RBP13.63□□□□□ -0.23
HPS1-204ENST00000361490 GTF2IP78347 998 aa13.63□□□□□ -0.23
HPS1-204ENST00000361490 PRR5LQ6MZQ0 368 aa13.63□□□□□ -0.23
HPS1-204ENST00000361490 C8orf76Q96K31 380 aa13.63□□□□□ -0.23
HPS1-204ENST00000361490 FAM84BQ96KN1 310 aaPredicted RBP13.63□□□□□ -0.23
HPS1-204ENST00000361490 TTC14Q96N46 770 aa13.63□□□□□ -0.23
HPS1-204ENST00000361490 SLC26A6Q9BXS9 759 aa13.63□□□□□ -0.23
HPS1-204ENST00000361490 GGA1Q9UJY5 639 aa13.63□□□□□ -0.23
HPS1-204ENST00000361490 TOB2Q14106 344 aaPredicted RBP13.63□□□□□ -0.23
HPS1-204ENST00000361490 UBE4AQ14139 1066 aa13.63□□□□□ -0.23
HPS1-204ENST00000361490 RBM17Q96I25 401 aaKnown RBP13.63□□□□□ -0.23
HPS1-204ENST00000361490 STX8Q9UNK0 236 aa13.63□□□□□ -0.23
HPS1-204ENST00000361490 TSPY2A6NKD2 308 aa13.62□□□□□ -0.23
HPS1-204ENST00000361490 SCRN1Q12765 414 aa13.62□□□□□ -0.23
HPS1-204ENST00000361490 CSPP1Q1MSJ5 1256 aa13.62□□□□□ -0.23
HPS1-204ENST00000361490 FAM47AQ5JRC9 791 aa13.62□□□□□ -0.23
HPS1-204ENST00000361490 BRD1O95696 1058 aa13.62□□□□□ -0.23
HPS1-204ENST00000361490 ZNF804AQ7Z570 1209 aa13.62□□□□□ -0.23
HPS1-204ENST00000361490 ZBTB43O43298 467 aa13.61□□□□□ -0.23
HPS1-204ENST00000361490 MAPKAPK5Q8IW41 473 aa13.61□□□□□ -0.23
HPS1-204ENST00000361490 C5P01031 1676 aa13.61□□□□□ -0.23
HPS1-204ENST00000361490 CUL4AQ13619 759 aa13.61□□□□□ -0.23
HPS1-204ENST00000361490 WTAPQ15007 396 aa13.61□□□□□ -0.23
HPS1-204ENST00000361490 DEFB132Q7Z7B7 95 aa13.61□□□□□ -0.23
HPS1-204ENST00000361490 CNTNAP4Q9C0A0 1308 aa13.61□□□□□ -0.23
HPS1-204ENST00000361490 PATL2C9JE40 543 aaKnown RBP13.61□□□□□ -0.23
HPS1-204ENST00000361490 GYS1P13807 737 aa13.61□□□□□ -0.23
HPS1-204ENST00000361490 SCNN1DP51172 638 aa13.61□□□□□ -0.23
HPS1-204ENST00000361490 UBE3CQ15386 1083 aa13.61□□□□□ -0.23
HPS1-204ENST00000361490 CKAP2LQ8IYA6 745 aa13.61□□□□□ -0.23
HPS1-204ENST00000361490 STRBPQ96SI9 672 aaKnown RBP13.61□□□□□ -0.23
HPS1-204ENST00000361490 CRNKL1Q9BZJ0 848 aaKnown RBP13.61□□□□□ -0.23
HPS1-204ENST00000361490 STK38Q15208 465 aa13.6□□□□□ -0.23
HPS1-204ENST00000361490 MFSD14BQ5SR56 506 aa13.6□□□□□ -0.23
HPS1-204ENST00000361490 RC3H1Q5TC82 1133 aaKnown RBP13.6□□□□□ -0.23
HPS1-204ENST00000361490 GRPEL1Q9HAV7 217 aa13.6□□□□□ -0.23
HPS1-204ENST00000361490 TBC1D10CQ8IV04 446 aa13.6□□□□□ -0.23
HPS1-204ENST00000361490 TGFBRAP1Q8WUH2 860 aa13.6□□□□□ -0.23
HPS1-204ENST00000361490 PARP4Q9UKK3 1724 aaKnown RBP13.6□□□□□ -0.23
HPS1-204ENST00000361490 SLIT2O94813 1529 aa13.6□□□□□ -0.23
HPS1-204ENST00000361490 AK9Q5TCS8 1911 aa13.6□□□□□ -0.23
HPS1-204ENST00000361490 SMIM22K7EJ46 135 aa13.6□□□□□ -0.23
HPS1-204ENST00000361490 NASPP49321 788 aaPredicted RBP13.6□□□□□ -0.23
HPS1-204ENST00000361490 SF3B3Q15393 1217 aaKnown RBP13.6□□□□□ -0.23
HPS1-204ENST00000361490 DPP8Q6V1X1 898 aaPredicted RBP13.6□□□□□ -0.23
HPS1-204ENST00000361490 IQCA1Q86XH1 822 aa13.6□□□□□ -0.23
HPS1-204ENST00000361490 LMBRD1Q9NUN5 540 aa13.6□□□□□ -0.23
HPS1-204ENST00000361490 COL14A1Q05707 1796 aaKnown RBP13.59□□□□□ -0.23
HPS1-204ENST00000361490 MBD3O95983 291 aa13.59□□□□□ -0.23
HPS1-204ENST00000361490 SLC3A2P08195 630 aaKnown RBP13.59□□□□□ -0.23
HPS1-204ENST00000361490 IARSP41252 1262 aaKnown RBP13.59□□□□□ -0.23
HPS1-204ENST00000361490 MECOMQ03112 1051 aa13.59□□□□□ -0.23
HPS1-204ENST00000361490 MED23Q9ULK4 1368 aa13.59□□□□□ -0.23
HPS1-204ENST00000361490 GRAPQ13588 217 aa13.59□□□□□ -0.23
HPS1-204ENST00000361490 GRAPLQ8TC17 118 aaPredicted RBP13.59□□□□□ -0.23
HPS1-204ENST00000361490 GTF3C6Q969F1 213 aa13.59□□□□□ -0.23
HPS1-204ENST00000361490 DBNDD1Q9H9R9 158 aa13.59□□□□□ -0.23
HPS1-204ENST00000361490 VAT1LQ9HCJ6 419 aa13.59□□□□□ -0.23
HPS1-204ENST00000361490 LTBP4Q8N2S1 1624 aa13.59□□□□□ -0.23
HPS1-204ENST00000361490 SRCAPQ6ZRS2 3230 aa13.59□□□□□ -0.23
HPS1-204ENST00000361490 MPHOSPH10O00566 681 aaKnown RBP13.59□□□□□ -0.23
HPS1-204ENST00000361490 KLHL40Q2TBA0 621 aa13.59□□□□□ -0.23
HPS1-204ENST00000361490 GIMAP6Q6P9H5 292 aa13.59□□□□□ -0.23
HPS1-204ENST00000361490 TRIM22Q8IYM9 498 aa13.59□□□□□ -0.23
HPS1-204ENST00000361490 VGLL2Q8N8G2 317 aa13.59□□□□□ -0.23
HPS1-204ENST00000361490 AIFM3Q96NN9 605 aa13.59□□□□□ -0.23
HPS1-204ENST00000361490 TRIM34Q9BYJ4 488 aa13.59□□□□□ -0.23
HPS1-204ENST00000361490 ANGEL1Q9UNK9 670 aaKnown RBP13.59□□□□□ -0.23
HPS1-204ENST00000361490 MTMR6Q9Y217 621 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms