RNA–Protein interactions for RNA: ENST00000360620.7

EPHB4-202, Transcript of EPH receptor B4, humanhuman

TSL 1 (best) BASIC

Gene EPHB4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-202ENST00000360620 A0A1B0GUL7 405 aa13.71□□□□□ -0.21
EPHB4-202ENST00000360620 PRAMEF22A3QJZ6 481 aa13.71□□□□□ -0.21
EPHB4-202ENST00000360620 CTAGE15A4D2H0 777 aa13.71□□□□□ -0.21
EPHB4-202ENST00000360620 RHOXF2BP0C7M4 288 aa13.71□□□□□ -0.21
EPHB4-202ENST00000360620 CTAGE8P0CG41 777 aa13.71□□□□□ -0.21
EPHB4-202ENST00000360620 EIF5P55010 431 aaKnown RBP13.71□□□□□ -0.21
EPHB4-202ENST00000360620 CTAGE6Q86UF2 777 aa13.71□□□□□ -0.21
EPHB4-202ENST00000360620 CTAGE4Q8IX94 777 aa13.71□□□□□ -0.21
EPHB4-202ENST00000360620 RHOXF2Q9BQY4 288 aa13.71□□□□□ -0.21
EPHB4-202ENST00000360620 CLIC4Q9Y696 253 aa13.71□□□□□ -0.21
EPHB4-202ENST00000360620 GCP02774 474 aa13.71□□□□□ -0.21
EPHB4-202ENST00000360620 PDIA3P30101 505 aaKnown RBP13.71□□□□□ -0.21
EPHB4-202ENST00000360620 CLCN6P51797 869 aa13.71□□□□□ -0.21
EPHB4-202ENST00000360620 MTX1Q13505 466 aa13.71□□□□□ -0.21
EPHB4-202ENST00000360620 MAP9Q49MG5 647 aa13.71□□□□□ -0.21
EPHB4-202ENST00000360620 SPECC1Q5M775 1068 aa13.71□□□□□ -0.21
EPHB4-202ENST00000360620 ZNF569Q5MCW4 686 aa13.71□□□□□ -0.21
EPHB4-202ENST00000360620 KANK3Q6NY19 840 aa13.71□□□□□ -0.21
EPHB4-202ENST00000360620 LDHAL6AQ6ZMR3 332 aa13.71□□□□□ -0.21
EPHB4-202ENST00000360620 DSCC1Q9BVC3 393 aa13.71□□□□□ -0.21
EPHB4-202ENST00000360620 KCNH3Q9ULD8 1083 aa13.71□□□□□ -0.21
EPHB4-202ENST00000360620 NFE2L3Q9Y4A8 694 aa13.71□□□□□ -0.21
EPHB4-202ENST00000360620 MARCH6O60337 910 aa13.71□□□□□ -0.22
EPHB4-202ENST00000360620 SMARCC1Q92922 1105 aaPredicted RBP13.71□□□□□ -0.22
EPHB4-202ENST00000360620 ZNF274Q96GC6 653 aaPredicted RBP13.71□□□□□ -0.22
EPHB4-202ENST00000360620 STIM1Q13586 685 aa13.7□□□□□ -0.22
EPHB4-202ENST00000360620 SMC1AQ14683 1233 aaKnown RBP13.7□□□□□ -0.22
EPHB4-202ENST00000360620 SLC9C2Q5TAH2 1124 aa13.7□□□□□ -0.22
EPHB4-202ENST00000360620 NUTM2AQ8IVF1 878 aaPredicted RBP13.7□□□□□ -0.22
EPHB4-202ENST00000360620 DHX37Q8IY37 1157 aaKnown RBP13.7□□□□□ -0.22
EPHB4-202ENST00000360620 CEP112Q8N8E3 955 aa13.7□□□□□ -0.22
EPHB4-202ENST00000360620 HSPD1P10809 573 aaKnown RBP13.7□□□□□ -0.22
EPHB4-202ENST00000360620 PNOCQ13519 176 aa13.7□□□□□ -0.22
EPHB4-202ENST00000360620 PTPN21Q16825 1174 aa13.7□□□□□ -0.22
EPHB4-202ENST00000360620 TBX22Q9Y458 520 aa13.7□□□□□ -0.22
EPHB4-202ENST00000360620 A0A1W2PQ27 194 aa13.7□□□□□ -0.22
EPHB4-202ENST00000360620 A0A1W2PQ64 194 aa13.7□□□□□ -0.22
EPHB4-202ENST00000360620 A0A1W2PQD8 194 aa13.7□□□□□ -0.22
EPHB4-202ENST00000360620 CTAGE9A4FU28 777 aa13.7□□□□□ -0.22
EPHB4-202ENST00000360620 MINDY4BA8MYZ0 360 aa13.7□□□□□ -0.22
EPHB4-202ENST00000360620 KRT28Q7Z3Y7 464 aa13.7□□□□□ -0.22
EPHB4-202ENST00000360620 KRI1Q8N9T8 703 aaKnown RBP13.7□□□□□ -0.22
EPHB4-202ENST00000360620 HAUS7Q99871 368 aa13.7□□□□□ -0.22
EPHB4-202ENST00000360620 DEF6Q9H4E7 631 aa13.7□□□□□ -0.22
EPHB4-202ENST00000360620 RTEL1Q9NZ71 1219 aa13.7□□□□□ -0.22
EPHB4-202ENST00000360620 RSPH14Q9UHP6 348 aa13.7□□□□□ -0.22
EPHB4-202ENST00000360620 MORC2Q9Y6X9 1032 aaPredicted RBP13.7□□□□□ -0.22
EPHB4-202ENST00000360620 ARHGEF28Q8N1W1 1705 aaKnown RBP13.7□□□□□ -0.22
EPHB4-202ENST00000360620 CLTCQ00610 1675 aaKnown RBP13.69□□□□□ -0.22
EPHB4-202ENST00000360620 RBM6P78332 1123 aaKnown RBP13.69□□□□□ -0.22
EPHB4-202ENST00000360620 TOM1L2Q6ZVM7 507 aa13.69□□□□□ -0.22
EPHB4-202ENST00000360620 DHX58Q96C10 678 aa13.69□□□□□ -0.22
EPHB4-202ENST00000360620 CPS1P31327 1500 aa13.69□□□□□ -0.22
EPHB4-202ENST00000360620 EFCAB8A8MWE9 144 aa13.69□□□□□ -0.22
EPHB4-202ENST00000360620 SEC31AO94979 1220 aaKnown RBP13.69□□□□□ -0.22
EPHB4-202ENST00000360620 ADKP55263 362 aaKnown RBP13.69□□□□□ -0.22
EPHB4-202ENST00000360620 CHMP4BP1P59074 171 aa13.69□□□□□ -0.22
EPHB4-202ENST00000360620 CCDC181Q5TID7 509 aa13.69□□□□□ -0.22
EPHB4-202ENST00000360620 FBXO18Q8NFZ0 1043 aa13.69□□□□□ -0.22
EPHB4-202ENST00000360620 ZNF594Q96JF6 807 aaPredicted RBP13.69□□□□□ -0.22
EPHB4-202ENST00000360620 RASSF4Q9H2L5 321 aa13.69□□□□□ -0.22
EPHB4-202ENST00000360620 GOLPH3LQ9H4A5 285 aa13.69□□□□□ -0.22
EPHB4-202ENST00000360620 LRP2BPQ9P2M1 347 aa13.69□□□□□ -0.22
EPHB4-202ENST00000360620 KAT6BQ8WYB5 2073 aa13.69□□□□□ -0.22
EPHB4-202ENST00000360620 IVLP07476 585 aa13.69□□□□□ -0.22
EPHB4-202ENST00000360620 GOLGA8FQ08AF8 430 aa13.69□□□□□ -0.22
EPHB4-202ENST00000360620 GOLGA8DPQ0D2H9 430 aa13.69□□□□□ -0.22
EPHB4-202ENST00000360620 IQCB1Q15051 598 aa13.69□□□□□ -0.22
EPHB4-202ENST00000360620 TRMT44Q8IYL2 757 aaKnown RBP13.69□□□□□ -0.22
EPHB4-202ENST00000360620 PHKBQ93100 1093 aa13.69□□□□□ -0.22
EPHB4-202ENST00000360620 DESI2Q9BSY9 194 aa13.69□□□□□ -0.22
EPHB4-202ENST00000360620 COPRSQ9NQ92 184 aa13.69□□□□□ -0.22
EPHB4-202ENST00000360620 EYA2O00167 538 aa13.68□□□□□ -0.22
EPHB4-202ENST00000360620 WDHD1O75717 1129 aaPredicted RBP13.68□□□□□ -0.22
EPHB4-202ENST00000360620 KRT40Q6A162 431 aa13.68□□□□□ -0.22
EPHB4-202ENST00000360620 ZNF496Q96IT1 587 aaPredicted RBP13.68□□□□□ -0.22
EPHB4-202ENST00000360620 FANCLQ9NW38 375 aa13.68□□□□□ -0.22
EPHB4-202ENST00000360620 TAF6LQ9Y6J9 622 aa13.68□□□□□ -0.22
EPHB4-202ENST00000360620 MAP2P11137 1827 aaKnown RBP13.68□□□□□ -0.22
EPHB4-202ENST00000360620 CARMIL3Q8ND23 1372 aa13.68□□□□□ -0.22
EPHB4-202ENST00000360620 AKR1B15C9JRZ8 316 aaPredicted RBP13.68□□□□□ -0.22
EPHB4-202ENST00000360620 LINC00301Q8NCQ3 95 aa13.68□□□□□ -0.22
EPHB4-202ENST00000360620 PPP2R2CQ9Y2T4 447 aa13.68□□□□□ -0.22
EPHB4-202ENST00000360620 PNMA6AP0CW24 399 aaPredicted RBP13.68□□□□□ -0.22
EPHB4-202ENST00000360620 ATP1A3P13637 1013 aa13.68□□□□□ -0.22
EPHB4-202ENST00000360620 CMA1P23946 247 aa13.68□□□□□ -0.22
EPHB4-202ENST00000360620 MAP3K12Q12852 859 aa13.68□□□□□ -0.22
EPHB4-202ENST00000360620 ZSCAN26Q16670 478 aa13.68□□□□□ -0.22
EPHB4-202ENST00000360620 GPR161Q8N6U8 529 aaKnown RBP13.68□□□□□ -0.22
EPHB4-202ENST00000360620 ABCF2Q9UG63 623 aa13.68□□□□□ -0.22
EPHB4-202ENST00000360620 ANGEL1Q9UNK9 670 aaKnown RBP13.68□□□□□ -0.22
EPHB4-202ENST00000360620 GPTP24298 496 aa13.67□□□□□ -0.22
EPHB4-202ENST00000360620 POLR2DO15514 142 aaKnown RBP13.67□□□□□ -0.22
EPHB4-202ENST00000360620 IQCEQ6IPM2 695 aa13.67□□□□□ -0.22
EPHB4-202ENST00000360620 MFSD6Q6ZSS7 791 aa13.67□□□□□ -0.22
EPHB4-202ENST00000360620 PLCD3Q8N3E9 789 aa13.67□□□□□ -0.22
EPHB4-202ENST00000360620 B4E1Z4 1266 aa13.67□□□□□ -0.22
EPHB4-202ENST00000360620 RTN1Q16799 776 aa13.67□□□□□ -0.22
EPHB4-202ENST00000360620 SPECC1LQ69YQ0 1117 aa13.67□□□□□ -0.22
EPHB4-202ENST00000360620 CTR9Q6PD62 1173 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms