RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 A0A1W2PQD8 194 aa10.01□□□□□ -0.81
RFX3-202ENST00000358730 TRDNQ13061 729 aa10.01□□□□□ -0.81
RFX3-202ENST00000358730 MYSM1Q5VVJ2 828 aa10.01□□□□□ -0.81
RFX3-202ENST00000358730 BRAPQ7Z569 592 aa10.01□□□□□ -0.81
RFX3-202ENST00000358730 TEX13AQ9BXU3 409 aaPredicted RBP10.01□□□□□ -0.81
RFX3-202ENST00000358730 NAT10Q9H0A0 1025 aaKnown RBP10.01□□□□□ -0.81
RFX3-202ENST00000358730 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.01□□□□□ -0.81
RFX3-202ENST00000358730 YEATS4O95619 227 aa10□□□□□ -0.81
RFX3-202ENST00000358730 ADD2P35612 726 aa10□□□□□ -0.81
RFX3-202ENST00000358730 CTSWP56202 376 aa10□□□□□ -0.81
RFX3-202ENST00000358730 ZRSR1Q15695 479 aaKnown RBP10□□□□□ -0.81
RFX3-202ENST00000358730 HLFQ16534 295 aa10□□□□□ -0.81
RFX3-202ENST00000358730 GIGYF2Q6Y7W6 1299 aaKnown RBP10□□□□□ -0.81
RFX3-202ENST00000358730 PIGBQ92521 554 aa10□□□□□ -0.81
RFX3-202ENST00000358730 POLR3EQ9NVU0 708 aa10□□□□□ -0.81
RFX3-202ENST00000358730 RIPOR2Q9Y4F9 1068 aa10□□□□□ -0.81
RFX3-202ENST00000358730 ANKRD36CQ5JPF3 1778 aa10□□□□□ -0.81
RFX3-202ENST00000358730 CDHR2Q9BYE9 1310 aa10□□□□□ -0.81
RFX3-202ENST00000358730 ANKRD18BA2A2Z9 1011 aa10□□□□□ -0.81
RFX3-202ENST00000358730 SPTLC2O15270 562 aa10□□□□□ -0.81
RFX3-202ENST00000358730 IDH1O75874 414 aaKnown RBP10□□□□□ -0.81
RFX3-202ENST00000358730 SLC9C2Q5TAH2 1124 aa10□□□□□ -0.81
RFX3-202ENST00000358730 NLRP10Q86W26 655 aa10□□□□□ -0.81
RFX3-202ENST00000358730 TAOK2Q9UL54 1235 aa10□□□□□ -0.81
RFX3-202ENST00000358730 ITGB4P16144 1822 aa10□□□□□ -0.81
RFX3-202ENST00000358730 ATRNO75882 1429 aa10□□□□□ -0.81
RFX3-202ENST00000358730 WDR19Q8NEZ3 1342 aa10□□□□□ -0.81
RFX3-202ENST00000358730 KIF28PB7ZC32 967 aa9.99□□□□□ -0.81
RFX3-202ENST00000358730 APPP05067 770 aa9.99□□□□□ -0.81
RFX3-202ENST00000358730 TNNT1P13805 278 aa9.99□□□□□ -0.81
RFX3-202ENST00000358730 ARID5BQ14865 1188 aa9.99□□□□□ -0.81
RFX3-202ENST00000358730 TPD52L1Q16890 204 aaPredicted RBP9.99□□□□□ -0.81
RFX3-202ENST00000358730 SYNE3Q6ZMZ3 975 aa9.99□□□□□ -0.81
RFX3-202ENST00000358730 FILIP1Q7Z7B0 1213 aa9.99□□□□□ -0.81
RFX3-202ENST00000358730 TBC1D10CQ8IV04 446 aa9.99□□□□□ -0.81
RFX3-202ENST00000358730 LRRC8AQ8IWT6 810 aa9.99□□□□□ -0.81
RFX3-202ENST00000358730 TTLL11Q8NHH1 800 aa9.99□□□□□ -0.81
RFX3-202ENST00000358730 NBPF3Q9H094 633 aa9.99□□□□□ -0.81
RFX3-202ENST00000358730 DENND2AQ9ULE3 1009 aa9.99□□□□□ -0.81
RFX3-202ENST00000358730 ANGEL1Q9UNK9 670 aaKnown RBP9.99□□□□□ -0.81
RFX3-202ENST00000358730 KIF23Q02241 960 aaPredicted RBP9.99□□□□□ -0.81
RFX3-202ENST00000358730 CCDC94Q9BW85 323 aaPredicted RBP9.99□□□□□ -0.81
RFX3-202ENST00000358730 ZMYM6O95789 1325 aa9.99□□□□□ -0.81
RFX3-202ENST00000358730 RXRAP19793 462 aa9.99□□□□□ -0.81
RFX3-202ENST00000358730 METAP2P50579 478 aaKnown RBP eCLIP9.99□□□□□ -0.81
RFX3-202ENST00000358730 TTF1Q15361 905 aaPredicted RBP9.99□□□□□ -0.81
RFX3-202ENST00000358730 DPCR1Q3MIW9 517 aa9.99□□□□□ -0.81
RFX3-202ENST00000358730 LRP6O75581 1613 aa9.98□□□□□ -0.81
RFX3-202ENST00000358730 ECM29Q5VYK3 1845 aa9.98□□□□□ -0.81
RFX3-202ENST00000358730 IRS4O14654 1257 aaPredicted RBP9.98□□□□□ -0.81
RFX3-202ENST00000358730 NEMFO60524 1076 aa9.98□□□□□ -0.81
RFX3-202ENST00000358730 ANO1Q5XXA6 986 aa9.98□□□□□ -0.81
RFX3-202ENST00000358730 VGLL2Q8N8G2 317 aa9.98□□□□□ -0.81
RFX3-202ENST00000358730 PIH1D3Q9NQM4 214 aaKnown RBP9.98□□□□□ -0.81
RFX3-202ENST00000358730 KIAA1468Q9P260 1216 aa9.98□□□□□ -0.81
RFX3-202ENST00000358730 SLAIN2Q9P270 581 aa9.98□□□□□ -0.81
RFX3-202ENST00000358730 TRMT112Q9UI30 125 aaKnown RBP9.98□□□□□ -0.81
RFX3-202ENST00000358730 ZNF532Q9HCE3 1301 aa9.98□□□□□ -0.81
RFX3-202ENST00000358730 SMTNL1A8MU46 457 aa9.98□□□□□ -0.81
RFX3-202ENST00000358730 CYB5R4Q7L1T6 521 aa9.98□□□□□ -0.81
RFX3-202ENST00000358730 MICU3Q86XE3 530 aa9.98□□□□□ -0.81
RFX3-202ENST00000358730 AIFM3Q96NN9 605 aa9.98□□□□□ -0.81
RFX3-202ENST00000358730 ALG1Q9BT22 464 aa9.98□□□□□ -0.81
RFX3-202ENST00000358730 TBC1D2BQ9UPU7 963 aa9.98□□□□□ -0.81
RFX3-202ENST00000358730 MROH7-TTC4A0A0A0MT08 1334 aa9.98□□□□□ -0.81
RFX3-202ENST00000358730 NEDD4P46934 1319 aa9.98□□□□□ -0.81
RFX3-202ENST00000358730 NUP98P52948 1817 aa9.97□□□□□ -0.81
RFX3-202ENST00000358730 CCDC69A6NI79 296 aa9.97□□□□□ -0.81
RFX3-202ENST00000358730 BIN1O00499 593 aa9.97□□□□□ -0.81
RFX3-202ENST00000358730 SH2B2O14492 632 aaPredicted RBP9.97□□□□□ -0.81
RFX3-202ENST00000358730 CTIFO43310 598 aaKnown RBP9.97□□□□□ -0.81
RFX3-202ENST00000358730 SLC3A2P08195 630 aaKnown RBP9.97□□□□□ -0.81
RFX3-202ENST00000358730 SKILP12757 684 aa9.97□□□□□ -0.81
RFX3-202ENST00000358730 PHKA1P46020 1223 aa9.97□□□□□ -0.81
RFX3-202ENST00000358730 GNL2Q13823 731 aaKnown RBP9.97□□□□□ -0.81
RFX3-202ENST00000358730 NKX2-3Q8TAU0 364 aa9.97□□□□□ -0.81
RFX3-202ENST00000358730 ZNF512BQ96KM6 892 aaPredicted RBP9.97□□□□□ -0.81
RFX3-202ENST00000358730 ZMYND15Q9H091 742 aa9.97□□□□□ -0.81
RFX3-202ENST00000358730 CHD4Q14839 1912 aa9.97□□□□□ -0.81
RFX3-202ENST00000358730 B4E1Z4 1266 aa9.97□□□□□ -0.81
RFX3-202ENST00000358730 CDKL5O76039 1030 aa9.97□□□□□ -0.81
RFX3-202ENST00000358730 ZNF202O95125 648 aa9.97□□□□□ -0.81
RFX3-202ENST00000358730 PDE8BO95263 885 aa9.97□□□□□ -0.81
RFX3-202ENST00000358730 PFKFB1P16118 471 aa9.97□□□□□ -0.81
RFX3-202ENST00000358730 PDE6AP16499 860 aa9.97□□□□□ -0.81
RFX3-202ENST00000358730 CCDC102BQ68D86 513 aa9.97□□□□□ -0.81
RFX3-202ENST00000358730 APOA5Q6Q788 366 aa9.97□□□□□ -0.81
RFX3-202ENST00000358730 VPS37DQ86XT2 251 aa9.97□□□□□ -0.81
RFX3-202ENST00000358730 WWC3Q9ULE0 1092 aa9.97□□□□□ -0.81
RFX3-202ENST00000358730 ZBTB1Q9Y2K1 713 aa9.97□□□□□ -0.81
RFX3-202ENST00000358730 MARCKSP29966 332 aaPredicted RBP9.96□□□□□ -0.81
RFX3-202ENST00000358730 UBE3CQ15386 1083 aa9.96□□□□□ -0.81
RFX3-202ENST00000358730 CPLX2Q6PUV4 134 aaKnown RBP9.96□□□□□ -0.81
RFX3-202ENST00000358730 PDCL2Q8N4E4 241 aa9.96□□□□□ -0.81
RFX3-202ENST00000358730 ZNF592Q92610 1267 aa9.96□□□□□ -0.81
RFX3-202ENST00000358730 PHKBQ93100 1093 aa9.96□□□□□ -0.81
RFX3-202ENST00000358730 AIDAQ96BJ3 306 aa9.96□□□□□ -0.81
RFX3-202ENST00000358730 USP27XA6NNY8 438 aa9.96□□□□□ -0.82
RFX3-202ENST00000358730 SMC2O95347 1197 aa9.96□□□□□ -0.82
RFX3-202ENST00000358730 RBM6P78332 1123 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms