RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 A0A0G2JLW4 131 aa20.51■□□□□ 0.87
RTN4-204ENST00000357732 FAM237AA0A1B0GTK4 181 aa20.51■□□□□ 0.87
RTN4-204ENST00000357732 PPP6R2O75170 966 aa20.51■□□□□ 0.87
RTN4-204ENST00000357732 CDKL5O76039 1030 aa20.51■□□□□ 0.87
RTN4-204ENST00000357732 KIF23Q02241 960 aaPredicted RBP20.51■□□□□ 0.87
RTN4-204ENST00000357732 LRRC24Q50LG9 513 aa20.51■□□□□ 0.87
RTN4-204ENST00000357732 TTC39AQ5SRH9 613 aa20.51■□□□□ 0.87
RTN4-204ENST00000357732 AXDND1Q5T1B0 1012 aaPredicted RBP20.51■□□□□ 0.87
RTN4-204ENST00000357732 TAF3Q5VWG9 929 aa20.51■□□□□ 0.87
RTN4-204ENST00000357732 E4F1Q66K89 784 aaPredicted RBP20.51■□□□□ 0.87
RTN4-204ENST00000357732 ZNF594Q96JF6 807 aaPredicted RBP20.51■□□□□ 0.87
RTN4-204ENST00000357732 CBFA2T2O43439 604 aa20.51■□□□□ 0.87
RTN4-204ENST00000357732 SMC2O95347 1197 aa20.51■□□□□ 0.87
RTN4-204ENST00000357732 A1BGP04217 495 aa20.51■□□□□ 0.87
RTN4-204ENST00000357732 SLC39A14Q15043 492 aa20.51■□□□□ 0.87
RTN4-204ENST00000357732 TTLL5Q6EMB2 1281 aa20.51■□□□□ 0.87
RTN4-204ENST00000357732 CHST3Q7LGC8 479 aa20.51■□□□□ 0.87
RTN4-204ENST00000357732 PPP1R13BQ96KQ4 1090 aa20.51■□□□□ 0.87
RTN4-204ENST00000357732 IFNKQ9P0W0 207 aa20.51■□□□□ 0.87
RTN4-204ENST00000357732 TUBE1Q9UJT0 475 aa20.51■□□□□ 0.87
RTN4-204ENST00000357732 DCCP43146 1447 aa20.51■□□□□ 0.87
RTN4-204ENST00000357732 FGAP02671 866 aa20.5■□□□□ 0.87
RTN4-204ENST00000357732 NCAPHQ15003 741 aa20.5■□□□□ 0.87
RTN4-204ENST00000357732 ZBTB3Q9H5J0 574 aa20.5■□□□□ 0.87
RTN4-204ENST00000357732 TRMT1Q9NXH9 659 aaKnown RBP20.5■□□□□ 0.87
RTN4-204ENST00000357732 ZHX1Q9UKY1 873 aaPredicted RBP20.5■□□□□ 0.87
RTN4-204ENST00000357732 MYH7P12883 1935 aa20.5■□□□□ 0.87
RTN4-204ENST00000357732 ERVV-2B6SEH9 535 aa20.5■□□□□ 0.87
RTN4-204ENST00000357732 FOXP2O15409 715 aa20.5■□□□□ 0.87
RTN4-204ENST00000357732 KMT5BQ4FZB7 885 aa20.5■□□□□ 0.87
RTN4-204ENST00000357732 ARMCX5Q6P1M9 558 aa20.5■□□□□ 0.87
RTN4-204ENST00000357732 TMC6Q7Z403 805 aa20.5■□□□□ 0.87
RTN4-204ENST00000357732 PFKFB1P16118 471 aa20.49■□□□□ 0.87
RTN4-204ENST00000357732 CCDC57Q2TAC2 916 aa20.49■□□□□ 0.87
RTN4-204ENST00000357732 ELOA2Q8IYF1 753 aaPredicted RBP20.49■□□□□ 0.87
RTN4-204ENST00000357732 ATRNO75882 1429 aa20.49■□□□□ 0.87
RTN4-204ENST00000357732 KCPQ6ZWJ8 1503 aa20.49■□□□□ 0.87
RTN4-204ENST00000357732 ZNF213O14771 459 aa20.49■□□□□ 0.87
RTN4-204ENST00000357732 POLR3DP05423 398 aaPredicted RBP20.49■□□□□ 0.87
RTN4-204ENST00000357732 NAA30Q147X3 362 aaPredicted RBP20.49■□□□□ 0.87
RTN4-204ENST00000357732 CCDC93Q567U6 631 aa20.49■□□□□ 0.87
RTN4-204ENST00000357732 FCHSD1Q86WN1 690 aa20.49■□□□□ 0.87
RTN4-204ENST00000357732 ZMYM6O95789 1325 aa20.48■□□□□ 0.87
RTN4-204ENST00000357732 SPATA31A3Q5VYP0 1347 aa20.48■□□□□ 0.87
RTN4-204ENST00000357732 PHLPP2Q6ZVD8 1323 aa20.48■□□□□ 0.87
RTN4-204ENST00000357732 FKBP4Q02790 459 aaKnown RBP eCLIP20.48■□□□□ 0.87
RTN4-204ENST00000357732 WASHC4Q2M389 1173 aa20.48■□□□□ 0.87
RTN4-204ENST00000357732 GORABQ5T7V8 394 aa20.48■□□□□ 0.87
RTN4-204ENST00000357732 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.48■□□□□ 0.87
RTN4-204ENST00000357732 HPSEQ9Y251 543 aa20.48■□□□□ 0.87
RTN4-204ENST00000357732 PCDH11XQ9BZA7 1347 aa20.48■□□□□ 0.87
RTN4-204ENST00000357732 PCDH11YQ9BZA8 1340 aa20.48■□□□□ 0.87
RTN4-204ENST00000357732 TRIM28Q13263 835 aaKnown RBP20.48■□□□□ 0.87
RTN4-204ENST00000357732 CPLX2Q6PUV4 134 aaKnown RBP20.48■□□□□ 0.87
RTN4-204ENST00000357732 ISCA1Q9BUE6 129 aa20.48■□□□□ 0.87
RTN4-204ENST00000357732 PLA2G12BQ9BX93 195 aa20.48■□□□□ 0.87
RTN4-204ENST00000357732 SRRTQ9BXP5 876 aaKnown RBP20.48■□□□□ 0.87
RTN4-204ENST00000357732 MAP3K15Q6ZN16 1313 aa20.47■□□□□ 0.87
RTN4-204ENST00000357732 ANTXR2P58335 489 aa20.47■□□□□ 0.87
RTN4-204ENST00000357732 TRDNQ13061 729 aa20.47■□□□□ 0.87
RTN4-204ENST00000357732 XAGE2Q96GT9 111 aa20.47■□□□□ 0.87
RTN4-204ENST00000357732 PUS3Q9BZE2 481 aaKnown RBP20.47■□□□□ 0.87
RTN4-204ENST00000357732 A0A087WWV3 80 aa20.46■□□□□ 0.87
RTN4-204ENST00000357732 FANCCQ00597 558 aa20.46■□□□□ 0.87
RTN4-204ENST00000357732 ERCC4Q92889 916 aaPredicted RBP20.46■□□□□ 0.87
RTN4-204ENST00000357732 ZNF512BQ96KM6 892 aaPredicted RBP20.46■□□□□ 0.87
RTN4-204ENST00000357732 PPFIA3O75145 1194 aa20.46■□□□□ 0.87
RTN4-204ENST00000357732 SYKP43405 635 aa20.46■□□□□ 0.87
RTN4-204ENST00000357732 ELF2Q15723 593 aa20.46■□□□□ 0.87
RTN4-204ENST00000357732 FBXO38Q6PIJ6 1188 aa20.46■□□□□ 0.87
RTN4-204ENST00000357732 ZCRB1Q8TBF4 217 aaKnown RBP20.46■□□□□ 0.87
RTN4-204ENST00000357732 ANGEL1Q9UNK9 670 aaKnown RBP20.46■□□□□ 0.87
RTN4-204ENST00000357732 MYL5Q02045 173 aa20.45■□□□□ 0.86
RTN4-204ENST00000357732 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.45■□□□□ 0.86
RTN4-204ENST00000357732 TNS2Q63HR2 1409 aa20.45■□□□□ 0.86
RTN4-204ENST00000357732 H2AFXP16104 143 aaPredicted RBP20.45■□□□□ 0.86
RTN4-204ENST00000357732 ETF1P62495 437 aaKnown RBP20.45■□□□□ 0.86
RTN4-204ENST00000357732 OTUD7BQ6GQQ9 843 aa20.45■□□□□ 0.86
RTN4-204ENST00000357732 KIF28PB7ZC32 967 aa20.44■□□□□ 0.86
RTN4-204ENST00000357732 TMX1Q9H3N1 280 aa20.44■□□□□ 0.86
RTN4-204ENST00000357732 GPHNQ9NQX3 736 aaPredicted RBP20.44■□□□□ 0.86
RTN4-204ENST00000357732 GPAA1O43292 621 aa20.44■□□□□ 0.86
RTN4-204ENST00000357732 HAND2P61296 217 aa20.44■□□□□ 0.86
RTN4-204ENST00000357732 NKX1-1Q15270 411 aaPredicted RBP20.44■□□□□ 0.86
RTN4-204ENST00000357732 TTF1Q15361 905 aaPredicted RBP20.44■□□□□ 0.86
RTN4-204ENST00000357732 CADPS2Q86UW7 1296 aa20.44■□□□□ 0.86
RTN4-204ENST00000357732 TMEM87BQ96K49 555 aa20.44■□□□□ 0.86
RTN4-204ENST00000357732 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.43■□□□□ 0.86
RTN4-204ENST00000357732 BMS1Q14692 1282 aaKnown RBP20.43■□□□□ 0.86
RTN4-204ENST00000357732 TOM1L2Q6ZVM7 507 aa20.43■□□□□ 0.86
RTN4-204ENST00000357732 NOL10Q9BSC4 688 aaKnown RBP20.43■□□□□ 0.86
RTN4-204ENST00000357732 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.43■□□□□ 0.868e-8■□□□□ 10.6
RTN4-204ENST00000357732 STRCP1A6NGW2 1772 aa20.43■□□□□ 0.86
RTN4-204ENST00000357732 TCIRG1Q13488 830 aa20.43■□□□□ 0.86
RTN4-204ENST00000357732 FBXW7Q969H0 707 aa20.43■□□□□ 0.86
RTN4-204ENST00000357732 ALG1Q9BT22 464 aa20.43■□□□□ 0.86
RTN4-204ENST00000357732 PUS7LQ9H0K6 701 aaKnown RBP20.43■□□□□ 0.86
RTN4-204ENST00000357732 MROH7-TTC4A0A0A0MT08 1334 aa20.43■□□□□ 0.86
RTN4-204ENST00000357732 CUTAO60888 179 aa20.42■□□□□ 0.86
RTN4-204ENST00000357732 WDHD1O75717 1129 aaPredicted RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms