RNA–Protein interactions for RNA: ENST00000357325.9

HDGF-201, Transcript of heparin binding growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGF, Length 2,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-201ENST00000357325 TCRBV5S4A2TA0A5A2 114 aa29.17■■■□□ 2.26
HDGF-201ENST00000357325 FAM13BQ9NYF5 915 aa29.17■■■□□ 2.26
HDGF-201ENST00000357325 RRP9O43818 475 aaKnown RBP29.16■■■□□ 2.26
HDGF-201ENST00000357325 CCDC144CPQ8IYA2 1237 aa29.16■■■□□ 2.26
HDGF-201ENST00000357325 FBXO18Q8NFZ0 1043 aa29.16■■■□□ 2.26
HDGF-201ENST00000357325 B4E1Z4 1266 aa29.16■■■□□ 2.26
HDGF-201ENST00000357325 CCDC73Q6ZRK6 1079 aa29.16■■■□□ 2.26
HDGF-201ENST00000357325 ACSBG1Q96GR2 724 aa29.16■■■□□ 2.26
HDGF-201ENST00000357325 TACC3Q9Y6A5 838 aa29.16■■■□□ 2.26
HDGF-201ENST00000357325 DDX60Q8IY21 1712 aaKnown RBP29.15■■■□□ 2.26
HDGF-201ENST00000357325 ZNF512BQ96KM6 892 aaPredicted RBP29.15■■■□□ 2.26
HDGF-201ENST00000357325 NEDD4P46934 1319 aa29.15■■■□□ 2.26
HDGF-201ENST00000357325 UBE2Q2LH0YL09 131 aa29.15■■■□□ 2.26
HDGF-201ENST00000357325 CPLX1O14810 134 aa29.15■■■□□ 2.26
HDGF-201ENST00000357325 FGFR2P21802 821 aa29.15■■■□□ 2.26
HDGF-201ENST00000357325 ARID4AP29374 1257 aaPredicted RBP29.15■■■□□ 2.26
HDGF-201ENST00000357325 IL6STP40189 918 aaPredicted RBP29.15■■■□□ 2.26
HDGF-201ENST00000357325 FAM160A1Q05DH4 1040 aa29.15■■■□□ 2.26
HDGF-201ENST00000357325 LINC00301Q8NCQ3 95 aa29.15■■■□□ 2.26
HDGF-201ENST00000357325 RTEL1Q9NZ71 1219 aa29.15■■■□□ 2.26
HDGF-201ENST00000357325 DRC7Q8IY82 874 aa29.14■■■□□ 2.26
HDGF-201ENST00000357325 NDUFA8P51970 172 aa29.13■■■□□ 2.25
HDGF-201ENST00000357325 MYL10Q9BUA6 226 aa29.13■■■□□ 2.25
HDGF-201ENST00000357325 KINO60870 393 aaKnown RBP29.13■■■□□ 2.25
HDGF-201ENST00000357325 CDC27P30260 824 aa29.13■■■□□ 2.25
HDGF-201ENST00000357325 RASGRF1Q13972 1273 aa29.13■■■□□ 2.25
HDGF-201ENST00000357325 UBE3CQ15386 1083 aa29.13■■■□□ 2.25
HDGF-201ENST00000357325 FMR1NBQ8N0W7 255 aaPredicted RBP29.13■■■□□ 2.25
HDGF-201ENST00000357325 ERVV-1B6SEH8 477 aa29.12■■■□□ 2.25
HDGF-201ENST00000357325 PUM3Q15397 648 aaKnown RBP29.12■■■□□ 2.25
HDGF-201ENST00000357325 CCDC144BQ3MJ40 725 aa29.12■■■□□ 2.25
HDGF-201ENST00000357325 INTS5Q6P9B9 1019 aaKnown RBP29.12■■■□□ 2.25
HDGF-201ENST00000357325 PHKBQ93100 1093 aa29.12■■■□□ 2.25
HDGF-201ENST00000357325 STRBPQ96SI9 672 aaKnown RBP29.12■■■□□ 2.25
HDGF-201ENST00000357325 EPB41L4AQ9HCS5 686 aaPredicted RBP29.12■■■□□ 2.25
HDGF-201ENST00000357325 TTF1Q15361 905 aaPredicted RBP29.12■■■□□ 2.25
HDGF-201ENST00000357325 ZSCAN25Q6NSZ9 544 aa29.12■■■□□ 2.25
HDGF-201ENST00000357325 MYSM1Q5VVJ2 828 aa29.11■■■□□ 2.25
HDGF-201ENST00000357325 ATL3Q6DD88 541 aa29.11■■■□□ 2.25
HDGF-201ENST00000357325 LPIN2Q92539 896 aa29.11■■■□□ 2.25
HDGF-201ENST00000357325 ANGEL1Q9UNK9 670 aaKnown RBP29.11■■■□□ 2.25
HDGF-201ENST00000357325 C4AP0C0L4 1744 aa29.11■■■□□ 2.25
HDGF-201ENST00000357325 C4BP0C0L5 1744 aa29.11■■■□□ 2.25
HDGF-201ENST00000357325 ATRNO75882 1429 aa29.11■■■□□ 2.25
HDGF-201ENST00000357325 SH2B2O14492 632 aaPredicted RBP29.11■■■□□ 2.25
HDGF-201ENST00000357325 CTDSPL2Q05D32 466 aa29.11■■■□□ 2.25
HDGF-201ENST00000357325 MAGEB6Q8N7X4 407 aa29.11■■■□□ 2.25
HDGF-201ENST00000357325 GOLGA6L6A8MZA4 724 aa29.1■■■□□ 2.25
HDGF-201ENST00000357325 EIF5P55010 431 aaKnown RBP29.1■■■□□ 2.25
HDGF-201ENST00000357325 TRDNQ13061 729 aa29.1■■■□□ 2.25
HDGF-201ENST00000357325 STK38Q15208 465 aa29.1■■■□□ 2.25
HDGF-201ENST00000357325 SPATA5Q8NB90 893 aa29.1■■■□□ 2.25
HDGF-201ENST00000357325 DHX16O60231 1041 aaKnown RBP29.1■■■□□ 2.25
HDGF-201ENST00000357325 KIF23Q02241 960 aaPredicted RBP29.1■■■□□ 2.25
HDGF-201ENST00000357325 MICU3Q86XE3 530 aa29.1■■■□□ 2.25
HDGF-201ENST00000357325 MRPS27Q92552 414 aaKnown RBP29.1■■■□□ 2.25
HDGF-201ENST00000357325 ARMT1Q9H993 441 aa29.1■■■□□ 2.25
HDGF-201ENST00000357325 PRKAB2O43741 272 aa29.09■■■□□ 2.25
HDGF-201ENST00000357325 STX1AQ16623 288 aa29.09■■■□□ 2.25
HDGF-201ENST00000357325 ADALQ6DHV7 355 aa29.09■■■□□ 2.25
HDGF-201ENST00000357325 DHX40Q8IX18 779 aaKnown RBP29.09■■■□□ 2.25
HDGF-201ENST00000357325 STK11IPQ8N1F8 1099 aa29.09■■■□□ 2.25
HDGF-201ENST00000357325 AIDAQ96BJ3 306 aa29.09■■■□□ 2.25
HDGF-201ENST00000357325 DNAJC5Q9H3Z4 198 aa29.09■■■□□ 2.25
HDGF-201ENST00000357325 ARID5BQ14865 1188 aa29.08■■■□□ 2.25
HDGF-201ENST00000357325 DOT1LQ8TEK3 1739 aa29.08■■■□□ 2.25
HDGF-201ENST00000357325 MBD4O95243 580 aa29.08■■■□□ 2.25
HDGF-201ENST00000357325 METAP2P50579 478 aaKnown RBP eCLIP29.08■■■□□ 2.254e-6■□□□□ 9.6
HDGF-201ENST00000357325 BCAMP50895 628 aa29.08■■■□□ 2.25
HDGF-201ENST00000357325 APOA5Q6Q788 366 aa29.08■■■□□ 2.25
HDGF-201ENST00000357325 CLIP2Q9UDT6 1046 aa29.08■■■□□ 2.25
HDGF-201ENST00000357325 WTIPA6NIX2 430 aaPredicted RBP29.07■■■□□ 2.24
HDGF-201ENST00000357325 CTAGE5O15320 804 aa29.07■■■□□ 2.24
HDGF-201ENST00000357325 CRKLP46109 303 aaKnown RBP29.07■■■□□ 2.24
HDGF-201ENST00000357325 SF3A1Q15459 793 aaKnown RBP29.07■■■□□ 2.24
HDGF-201ENST00000357325 IGDCC4Q8TDY8 1250 aa29.07■■■□□ 2.24
HDGF-201ENST00000357325 MROH5Q6ZUA9 1318 aa29.07■■■□□ 2.24
HDGF-201ENST00000357325 ATP6V1AP38606 617 aa29.06■■■□□ 2.24
HDGF-201ENST00000357325 MYRIPQ8NFW9 859 aa29.06■■■□□ 2.24
HDGF-201ENST00000357325 COL16A1Q07092 1604 aaPredicted RBP29.06■■■□□ 2.24
HDGF-201ENST00000357325 ZMYM6O95789 1325 aa29.06■■■□□ 2.24
HDGF-201ENST00000357325 COL4A1P02462 1669 aa29.06■■■□□ 2.24
HDGF-201ENST00000357325 COL14A1Q05707 1796 aaKnown RBP29.06■■■□□ 2.24
HDGF-201ENST00000357325 SPTLC2O15270 562 aa29.06■■■□□ 2.24
HDGF-201ENST00000357325 ADAMTS2O95450 1211 aa29.06■■■□□ 2.24
HDGF-201ENST00000357325 UQCRFS1P1P0C7P4 283 aa29.06■■■□□ 2.24
HDGF-201ENST00000357325 MARCKSP29966 332 aaPredicted RBP29.06■■■□□ 2.24
HDGF-201ENST00000357325 ITPK1Q13572 414 aa29.06■■■□□ 2.24
HDGF-201ENST00000357325 IFNL3Q8IZI9 196 aa29.06■■■□□ 2.24
HDGF-201ENST00000357325 CACTINQ8WUQ7 758 aaKnown RBP29.06■■■□□ 2.24
HDGF-201ENST00000357325 ALG1Q9BT22 464 aa29.06■■■□□ 2.24
HDGF-201ENST00000357325 POLR3EQ9NVU0 708 aa29.06■■■□□ 2.24
HDGF-201ENST00000357325 WDR19Q8NEZ3 1342 aa29.06■■■□□ 2.24
HDGF-201ENST00000357325 WDHD1O75717 1129 aaPredicted RBP29.05■■■□□ 2.24
HDGF-201ENST00000357325 TPM3P06753 285 aa29.05■■■□□ 2.24
HDGF-201ENST00000357325 SDF4Q9BRK5 362 aa29.05■■■□□ 2.24
HDGF-201ENST00000357325 FAM217BQ9NTX9 383 aaPredicted RBP29.05■■■□□ 2.24
HDGF-201ENST00000357325 IQSEC3Q9UPP2 1182 aaPredicted RBP29.05■■■□□ 2.24
HDGF-201ENST00000357325 LRP5O75197 1615 aa29.05■■■□□ 2.24
HDGF-201ENST00000357325 GOLGA6L19H0YKK7 550 aa29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms