RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 PLCB3Q01970 1234 aa6.24□□□□□ -1.41
PTPRD-202ENST00000356435 DMTNQ08495 405 aa6.24□□□□□ -1.41
PTPRD-202ENST00000356435 ALG1Q9BT22 464 aa6.24□□□□□ -1.41
PTPRD-202ENST00000356435 PPIP5K1Q6PFW1 1433 aa6.24□□□□□ -1.41
PTPRD-202ENST00000356435 BCORL1Q5H9F3 1711 aa6.24□□□□□ -1.41
PTPRD-202ENST00000356435 NOP56O00567 594 aaKnown RBP6.24□□□□□ -1.41
PTPRD-202ENST00000356435 TACC1O75410 805 aa6.24□□□□□ -1.41
PTPRD-202ENST00000356435 RPL13P26373 211 aaKnown RBP6.24□□□□□ -1.41
PTPRD-202ENST00000356435 SNW1Q13573 536 aaKnown RBP6.24□□□□□ -1.41
PTPRD-202ENST00000356435 SEL1L2Q5TEA6 688 aa6.24□□□□□ -1.41
PTPRD-202ENST00000356435 CEP128Q6ZU80 1094 aa6.24□□□□□ -1.41
PTPRD-202ENST00000356435 FRMD4BQ9Y2L6 1034 aa6.24□□□□□ -1.41
PTPRD-202ENST00000356435 TUBB4AP04350 444 aa6.24□□□□□ -1.41
PTPRD-202ENST00000356435 NACA2Q9H009 215 aa6.24□□□□□ -1.41
PTPRD-202ENST00000356435 MBIPQ9NS73 344 aa6.24□□□□□ -1.41
PTPRD-202ENST00000356435 UHRF1BP1LA0JNW5 1464 aa6.24□□□□□ -1.41
PTPRD-202ENST00000356435 ADGBQ8N7X0 1667 aa6.24□□□□□ -1.41
PTPRD-202ENST00000356435 STRN3Q13033 797 aa6.24□□□□□ -1.41
PTPRD-202ENST00000356435 ANKS4BQ8N8V4 417 aa6.24□□□□□ -1.41
PTPRD-202ENST00000356435 XAGE3Q8WTP9 111 aa6.24□□□□□ -1.41
PTPRD-202ENST00000356435 PAIP2Q9BPZ3 127 aaKnown RBP6.24□□□□□ -1.41
PTPRD-202ENST00000356435 USP25Q9UHP3 1055 aa6.24□□□□□ -1.41
PTPRD-202ENST00000356435 PLCH2O75038 1416 aa6.24□□□□□ -1.41
PTPRD-202ENST00000356435 PI4KAP2A4QPH2 592 aa6.24□□□□□ -1.41
PTPRD-202ENST00000356435 STX10O60499 249 aa6.24□□□□□ -1.41
PTPRD-202ENST00000356435 DKC1O60832 514 aaKnown RBP eCLIP6.24□□□□□ -1.41
PTPRD-202ENST00000356435 TTC22Q5TAA0 569 aa6.24□□□□□ -1.41
PTPRD-202ENST00000356435 PI4KAP1Q8N8J0 262 aa6.24□□□□□ -1.41
PTPRD-202ENST00000356435 KIFC2Q96AC6 838 aa6.24□□□□□ -1.41
PTPRD-202ENST00000356435 NOX5Q96PH1 765 aa6.24□□□□□ -1.41
PTPRD-202ENST00000356435 CHPF2Q9P2E5 772 aa6.24□□□□□ -1.41
PTPRD-202ENST00000356435 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.24□□□□□ -1.41
PTPRD-202ENST00000356435 AFMP43652 599 aa6.24□□□□□ -1.41
PTPRD-202ENST00000356435 GABPAQ06546 454 aa6.24□□□□□ -1.41
PTPRD-202ENST00000356435 GLT8D2Q9H1C3 349 aa6.24□□□□□ -1.41
PTPRD-202ENST00000356435 PFDN4Q9NQP4 134 aa6.24□□□□□ -1.41
PTPRD-202ENST00000356435 FAM184BQ9ULE4 1060 aa6.24□□□□□ -1.41
PTPRD-202ENST00000356435 RIMBP2O15034 1052 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 UFL1O94874 794 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 GTF2F1P35269 517 aaKnown RBP eCLIP6.23□□□□□ -1.41
PTPRD-202ENST00000356435 BIRC3Q13489 604 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 AKAP4Q5JQC9 854 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 LRRC59Q96AG4 307 aaKnown RBP6.23□□□□□ -1.41
PTPRD-202ENST00000356435 IFT74Q96LB3 600 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 ZNF408Q9H9D4 720 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 PAG1Q9NWQ8 432 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 RNF113AO15541 343 aaKnown RBP6.23□□□□□ -1.41
PTPRD-202ENST00000356435 CNGA1P29973 690 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 PROCA1Q8NCQ7 364 aaPredicted RBP6.23□□□□□ -1.41
PTPRD-202ENST00000356435 NEK11Q8NG66 645 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 TRIM6Q9C030 488 aaPredicted RBP6.23□□□□□ -1.41
PTPRD-202ENST00000356435 TRIM75PA6NK02 468 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 SP4Q02446 784 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 RASA3Q14644 834 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 SLC9C2Q5TAH2 1124 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 LIN9Q5TKA1 542 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 FBXO31Q5XUX0 539 aaPredicted RBP6.23□□□□□ -1.41
PTPRD-202ENST00000356435 AFAP1L2Q8N4X5 818 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 DENND2AQ9ULE3 1009 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 IQSEC3Q9UPP2 1182 aaPredicted RBP6.23□□□□□ -1.41
PTPRD-202ENST00000356435 GRIN2AQ12879 1464 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 TRPM2O94759 1503 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 DISP1Q96F81 1524 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 ECM2O94769 699 aaPredicted RBP6.23□□□□□ -1.41
PTPRD-202ENST00000356435 HSPA4P34932 840 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 CCDC6Q16204 474 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 MSL1Q68DK7 614 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 MRPS27Q92552 414 aaKnown RBP6.23□□□□□ -1.41
PTPRD-202ENST00000356435 AZI2Q9H6S1 392 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 KRT83P78385 493 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 TRPC3Q13507 836 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 ZSCAN23Q3MJ62 389 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 MCMDC2Q4G0Z9 681 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 KIF24Q5T7B8 1368 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 CTAGE15A4D2H0 777 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 CTAGE8P0CG41 777 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 INF2Q27J81 1249 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 CTAGE6Q86UF2 777 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 CTAGE4Q8IX94 777 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 GSDMBQ8TAX9 411 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 NSMCE1Q8WV22 266 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 CSRNP2Q9H175 543 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 CCNL1Q9UK58 526 aaPredicted RBP6.23□□□□□ -1.41
PTPRD-202ENST00000356435 E7EVH7 732 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 MAP7Q14244 749 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 PPP1R7Q15435 360 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 SPOUT1Q5T280 376 aaKnown RBP6.23□□□□□ -1.41
PTPRD-202ENST00000356435 CCDC129Q6ZRS4 1044 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 INTS4Q96HW7 963 aaKnown RBP6.23□□□□□ -1.41
PTPRD-202ENST00000356435 FNBP1Q96RU3 617 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 NAP1L3Q99457 506 aaPredicted RBP6.23□□□□□ -1.41
PTPRD-202ENST00000356435 TSGA10Q9BZW7 698 aa6.23□□□□□ -1.41
PTPRD-202ENST00000356435 ARID4AP29374 1257 aaPredicted RBP6.22□□□□□ -1.41
PTPRD-202ENST00000356435 ZBTB16Q05516 673 aa6.22□□□□□ -1.41
PTPRD-202ENST00000356435 HACE1Q8IYU2 909 aa6.22□□□□□ -1.41
PTPRD-202ENST00000356435 TBC1D31Q96DN5 1066 aa6.22□□□□□ -1.41
PTPRD-202ENST00000356435 CCDC114Q96M63 670 aa6.22□□□□□ -1.41
PTPRD-202ENST00000356435 ZNF830Q96NB3 372 aaPredicted RBP6.22□□□□□ -1.41
PTPRD-202ENST00000356435 NSFL1CQ9UNZ2 370 aaKnown RBP6.22□□□□□ -1.41
PTPRD-202ENST00000356435 RIMS2Q9UQ26 1411 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms