RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 C8orf37Q96NL8 207 aa18.07■□□□□ 0.48
RXRA-201ENST00000356384 IGSF3O75054 1194 aa18.07■□□□□ 0.48
RXRA-201ENST00000356384 IL15P40933 162 aaPredicted RBP18.07■□□□□ 0.48
RXRA-201ENST00000356384 LACTBP83111 547 aaPredicted RBP18.07■□□□□ 0.48
RXRA-201ENST00000356384 GEN1Q17RS7 908 aa18.07■□□□□ 0.48
RXRA-201ENST00000356384 MIGA1Q8NAN2 632 aa18.07■□□□□ 0.48
RXRA-201ENST00000356384 STMN2Q93045 179 aa18.07■□□□□ 0.48
RXRA-201ENST00000356384 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.07■□□□□ 0.48
RXRA-201ENST00000356384 NKIRAS1Q9NYS0 192 aa18.07■□□□□ 0.48
RXRA-201ENST00000356384 UBAP1LF5GYI3 381 aa18.07■□□□□ 0.48
RXRA-201ENST00000356384 IDI1Q13907 227 aa18.07■□□□□ 0.48
RXRA-201ENST00000356384 CCDC122Q5T0U0 273 aa18.07■□□□□ 0.48
RXRA-201ENST00000356384 DTHD1Q6ZMT9 781 aa18.07■□□□□ 0.48
RXRA-201ENST00000356384 PFDN4Q9NQP4 134 aa18.07■□□□□ 0.48
RXRA-201ENST00000356384 PPP1R21Q6ZMI0 780 aa18.07■□□□□ 0.48
RXRA-201ENST00000356384 C16orf71Q8IYS4 520 aaPredicted RBP18.07■□□□□ 0.48
RXRA-201ENST00000356384 MCM9Q9NXL9 1143 aa18.07■□□□□ 0.48
RXRA-201ENST00000356384 VIMP08670 466 aaKnown RBP18.06■□□□□ 0.48
RXRA-201ENST00000356384 RXRAP19793 462 aa18.06■□□□□ 0.48
RXRA-201ENST00000356384 IRX5P78411 483 aaPredicted RBP18.06■□□□□ 0.48
RXRA-201ENST00000356384 ZNF804AQ7Z570 1209 aa18.06■□□□□ 0.48
RXRA-201ENST00000356384 NLRP3Q96P20 1036 aa18.06■□□□□ 0.48
RXRA-201ENST00000356384 PA2G4Q9UQ80 394 aaKnown RBP18.06■□□□□ 0.48
RXRA-201ENST00000356384 GRM8O00222 908 aa18.06■□□□□ 0.48
RXRA-201ENST00000356384 CIB2O75838 187 aa18.06■□□□□ 0.48
RXRA-201ENST00000356384 TUBB4BP68371 445 aa18.06■□□□□ 0.48
RXRA-201ENST00000356384 C10orf67Q8IYJ2 551 aa18.06■□□□□ 0.48
RXRA-201ENST00000356384 PTPRKQ15262 1439 aa18.06■□□□□ 0.48
RXRA-201ENST00000356384 ABCA5Q8WWZ7 1642 aa18.06■□□□□ 0.48
RXRA-201ENST00000356384 KRT5P13647 590 aa18.06■□□□□ 0.48
RXRA-201ENST00000356384 CCT6BQ92526 530 aa18.06■□□□□ 0.48
RXRA-201ENST00000356384 MRRFQ96E11 262 aaKnown RBP18.06■□□□□ 0.48
RXRA-201ENST00000356384 CRCPO75575 148 aa18.05■□□□□ 0.48
RXRA-201ENST00000356384 ATP6V1AP38606 617 aa18.05■□□□□ 0.48
RXRA-201ENST00000356384 SLC39A6Q13433 755 aa18.05■□□□□ 0.48
RXRA-201ENST00000356384 RSRC1Q96IZ7 334 aaKnown RBP18.05■□□□□ 0.48
RXRA-201ENST00000356384 PTPDC1A2A3K4 754 aa18.05■□□□□ 0.48
RXRA-201ENST00000356384 AK2P54819 239 aa18.05■□□□□ 0.48
RXRA-201ENST00000356384 TSGA10Q9BZW7 698 aa18.05■□□□□ 0.48
RXRA-201ENST00000356384 BACH1O14867 736 aa18.05■□□□□ 0.48
RXRA-201ENST00000356384 HPDP32754 393 aaPredicted RBP18.05■□□□□ 0.48
RXRA-201ENST00000356384 IL16Q14005 1332 aa18.05■□□□□ 0.48
RXRA-201ENST00000356384 HSPA1LP34931 641 aa18.05■□□□□ 0.48
RXRA-201ENST00000356384 RBM26Q5T8P6 1007 aaKnown RBP18.05■□□□□ 0.48
RXRA-201ENST00000356384 HDXQ7Z353 690 aa18.05■□□□□ 0.48
RXRA-201ENST00000356384 B4DLN1 442 aa18.04■□□□□ 0.48
RXRA-201ENST00000356384 MRPL12P52815 198 aaKnown RBP18.04■□□□□ 0.48
RXRA-201ENST00000356384 ATP8B2P98198 1209 aa18.04■□□□□ 0.48
RXRA-201ENST00000356384 NAA25Q14CX7 972 aa18.04■□□□□ 0.48
RXRA-201ENST00000356384 CCDC65Q8IXS2 484 aa18.04■□□□□ 0.48
RXRA-201ENST00000356384 GTF3C6Q969F1 213 aa18.04■□□□□ 0.48
RXRA-201ENST00000356384 CCT6AP40227 531 aaKnown RBP18.04■□□□□ 0.48
RXRA-201ENST00000356384 MAGEB6Q8N7X4 407 aa18.04■□□□□ 0.48
RXRA-201ENST00000356384 AGTPBP1Q9UPW5 1226 aa18.04■□□□□ 0.48
RXRA-201ENST00000356384 NIP7Q9Y221 180 aaKnown RBP eCLIP18.04■□□□□ 0.48
RXRA-201ENST00000356384 RNF113AO15541 343 aaKnown RBP18.04■□□□□ 0.48
RXRA-201ENST00000356384 ANKRD44Q8N8A2 993 aa18.04■□□□□ 0.48
RXRA-201ENST00000356384 GAS8O95995 478 aa18.04■□□□□ 0.48
RXRA-201ENST00000356384 HARSP12081 509 aaKnown RBP18.04■□□□□ 0.48
RXRA-201ENST00000356384 GNA11P29992 359 aa18.04■□□□□ 0.48
RXRA-201ENST00000356384 PPP2R3AQ06190 1150 aa18.04■□□□□ 0.48
RXRA-201ENST00000356384 CNGA4Q8IV77 575 aa18.04■□□□□ 0.48
RXRA-201ENST00000356384 IQUBQ8NA54 791 aa18.04■□□□□ 0.48
RXRA-201ENST00000356384 CCDC26Q8TAB7 109 aa18.04■□□□□ 0.48
RXRA-201ENST00000356384 ARHGAP45Q92619 1136 aa18.04■□□□□ 0.48
RXRA-201ENST00000356384 CLUL1Q15846 466 aa18.03■□□□□ 0.48
RXRA-201ENST00000356384 PKD2L1Q9P0L9 805 aa18.03■□□□□ 0.48
RXRA-201ENST00000356384 GNAT2P19087 354 aa18.03■□□□□ 0.48
RXRA-201ENST00000356384 BIRC3Q13489 604 aa18.03■□□□□ 0.48
RXRA-201ENST00000356384 KIFC2Q96AC6 838 aa18.03■□□□□ 0.48
RXRA-201ENST00000356384 BAG1Q99933 345 aaPredicted RBP18.03■□□□□ 0.48
RXRA-201ENST00000356384 PCDHB15Q9Y5E8 787 aa18.03■□□□□ 0.48
RXRA-201ENST00000356384 AKR1B15C9JRZ8 316 aaPredicted RBP18.03■□□□□ 0.48
RXRA-201ENST00000356384 E7EVH7 732 aa18.03■□□□□ 0.48
RXRA-201ENST00000356384 SPOPO43791 374 aa18.03■□□□□ 0.48
RXRA-201ENST00000356384 RPL13P26373 211 aaKnown RBP18.03■□□□□ 0.48
RXRA-201ENST00000356384 ERCC5P28715 1186 aaPredicted RBP18.03■□□□□ 0.48
RXRA-201ENST00000356384 CEP85LQ5SZL2 805 aa18.03■□□□□ 0.48
RXRA-201ENST00000356384 GBP6Q6ZN66 633 aa18.03■□□□□ 0.48
RXRA-201ENST00000356384 GPR161Q8N6U8 529 aaKnown RBP18.03■□□□□ 0.48
RXRA-201ENST00000356384 KRT9P35527 623 aa18.02■□□□□ 0.48
RXRA-201ENST00000356384 CCDC117Q8IWD4 279 aaPredicted RBP18.02■□□□□ 0.48
RXRA-201ENST00000356384 VPS52Q8N1B4 723 aa18.02■□□□□ 0.48
RXRA-201ENST00000356384 GTPBP4Q9BZE4 634 aaKnown RBP18.02■□□□□ 0.48
RXRA-201ENST00000356384 FAM204AQ9H8W3 233 aa18.02■□□□□ 0.48
RXRA-201ENST00000356384 FRMD4BQ9Y2L6 1034 aa18.02■□□□□ 0.48
RXRA-201ENST00000356384 ASXL2Q76L83 1435 aa18.02■□□□□ 0.48
RXRA-201ENST00000356384 CLGNO14967 610 aa18.02■□□□□ 0.48
RXRA-201ENST00000356384 HAUS7Q99871 368 aa18.02■□□□□ 0.48
RXRA-201ENST00000356384 CCDC94Q9BW85 323 aaPredicted RBP18.02■□□□□ 0.48
RXRA-201ENST00000356384 CTNND2Q9UQB3 1225 aa18.02■□□□□ 0.48
RXRA-201ENST00000356384 CFAP43Q8NDM7 1665 aa18.02■□□□□ 0.48
RXRA-201ENST00000356384 TRAF5O00463 557 aa18.02■□□□□ 0.48
RXRA-201ENST00000356384 ALDH1L1O75891 902 aa18.02■□□□□ 0.48
RXRA-201ENST00000356384 CREB3L3Q68CJ9 461 aa18.02■□□□□ 0.48
RXRA-201ENST00000356384 VWA3AA6NCI4 1184 aa18.02■□□□□ 0.47
RXRA-201ENST00000356384 PROCA1Q8NCQ7 364 aaPredicted RBP18.02■□□□□ 0.47
RXRA-201ENST00000356384 RNASE9P60153 205 aaKnown RBP18.02■□□□□ 0.47
RXRA-201ENST00000356384 SEPT14Q6ZU15 432 aa18.02■□□□□ 0.47
RXRA-201ENST00000356384 HELBQ8NG08 1087 aaPredicted RBP18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms