RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 CYP7A1P22680 504 aa20.84■□□□□ 0.93
NPAS3-202ENST00000356141 MAP3K12Q12852 859 aa20.84■□□□□ 0.93
NPAS3-202ENST00000356141 ZFYP08048 801 aaPredicted RBP20.83■□□□□ 0.93
NPAS3-202ENST00000356141 RBM10P98175 930 aaKnown RBP20.83■□□□□ 0.93
NPAS3-202ENST00000356141 RALYLQ86SE5 291 aaKnown RBP20.83■□□□□ 0.93
NPAS3-202ENST00000356141 CNBD1Q8NA66 436 aa20.83■□□□□ 0.93
NPAS3-202ENST00000356141 MINDY4BA8MYZ0 360 aa20.83■□□□□ 0.92
NPAS3-202ENST00000356141 EPB41L4AQ9HCS5 686 aaPredicted RBP20.83■□□□□ 0.92
NPAS3-202ENST00000356141 TCRBV5S4A2TA0A5A2 114 aa20.82■□□□□ 0.92
NPAS3-202ENST00000356141 TTF1Q15361 905 aaPredicted RBP20.82■□□□□ 0.92
NPAS3-202ENST00000356141 KLHL40Q2TBA0 621 aa20.82■□□□□ 0.92
NPAS3-202ENST00000356141 ANKRD1Q15327 319 aa20.82■□□□□ 0.92
NPAS3-202ENST00000356141 LRRFIP1Q32MZ4 808 aaKnown RBP20.82■□□□□ 0.92
NPAS3-202ENST00000356141 ZSCAN23Q3MJ62 389 aa20.82■□□□□ 0.92
NPAS3-202ENST00000356141 OLFM4Q6UX06 510 aa20.82■□□□□ 0.92
NPAS3-202ENST00000356141 GTF3C6Q969F1 213 aa20.82■□□□□ 0.92
NPAS3-202ENST00000356141 FAM84BQ96KN1 310 aaPredicted RBP20.82■□□□□ 0.92
NPAS3-202ENST00000356141 SLC4A4Q9Y6R1 1079 aa20.82■□□□□ 0.92
NPAS3-202ENST00000356141 COL5A3P25940 1745 aaPredicted RBP20.82■□□□□ 0.92
NPAS3-202ENST00000356141 TDO2P48775 406 aa20.82■□□□□ 0.92
NPAS3-202ENST00000356141 FAM184AQ8NB25 1140 aa20.82■□□□□ 0.92
NPAS3-202ENST00000356141 RNF214Q8ND24 703 aa20.82■□□□□ 0.92
NPAS3-202ENST00000356141 SF3B3Q15393 1217 aaKnown RBP20.81■□□□□ 0.92
NPAS3-202ENST00000356141 TSGA10IPQ3SY00 556 aa20.81■□□□□ 0.92
NPAS3-202ENST00000356141 CYB5R4Q7L1T6 521 aa20.81■□□□□ 0.92
NPAS3-202ENST00000356141 CCDC82Q8N4S0 544 aa20.81■□□□□ 0.92
NPAS3-202ENST00000356141 STRBPQ96SI9 672 aaKnown RBP20.81■□□□□ 0.92
NPAS3-202ENST00000356141 FTOQ9C0B1 505 aaKnown RBP eCLIP20.81■□□□□ 0.92
NPAS3-202ENST00000356141 BSDC1Q9NW68 430 aaPredicted RBP20.81■□□□□ 0.92
NPAS3-202ENST00000356141 RFX7Q2KHR2 1363 aa20.81■□□□□ 0.92
NPAS3-202ENST00000356141 KLF18A0A0U1RQI7 1052 aa20.81■□□□□ 0.92
NPAS3-202ENST00000356141 PROM2Q8N271 834 aa20.81■□□□□ 0.92
NPAS3-202ENST00000356141 NAPBQ9H115 298 aa20.81■□□□□ 0.92
NPAS3-202ENST00000356141 TACC3Q9Y6A5 838 aa20.81■□□□□ 0.92
NPAS3-202ENST00000356141 NEDD4P46934 1319 aa20.8■□□□□ 0.92
NPAS3-202ENST00000356141 ANTXR2P58335 489 aa20.8■□□□□ 0.92
NPAS3-202ENST00000356141 CAVIN4Q5BKX8 364 aa20.8■□□□□ 0.92
NPAS3-202ENST00000356141 RC3H1Q5TC82 1133 aaKnown RBP20.8■□□□□ 0.92
NPAS3-202ENST00000356141 H3BQV1 296 aa20.8■□□□□ 0.92
NPAS3-202ENST00000356141 PRDM1O75626 825 aa20.8■□□□□ 0.92
NPAS3-202ENST00000356141 SKOR2Q2VWA4 1001 aaPredicted RBP20.8■□□□□ 0.92
NPAS3-202ENST00000356141 IFFO2Q5TF58 517 aa20.8■□□□□ 0.92
NPAS3-202ENST00000356141 NYXQ9GZU5 481 aa20.8■□□□□ 0.92
NPAS3-202ENST00000356141 CTDNEP1O95476 244 aa20.79■□□□□ 0.92
NPAS3-202ENST00000356141 PRDX5P30044 214 aa20.79■□□□□ 0.92
NPAS3-202ENST00000356141 EXOSC10Q01780 885 aaKnown RBP20.79■□□□□ 0.92
NPAS3-202ENST00000356141 ZSCAN25Q6NSZ9 544 aa20.79■□□□□ 0.92
NPAS3-202ENST00000356141 CLEC17AQ6ZS10 378 aa20.79■□□□□ 0.92
NPAS3-202ENST00000356141 PTPDC1A2A3K4 754 aa20.79■□□□□ 0.92
NPAS3-202ENST00000356141 GOLGA8BA8MQT2 603 aa20.79■□□□□ 0.92
NPAS3-202ENST00000356141 UBE2Q2LH0YL09 131 aa20.79■□□□□ 0.92
NPAS3-202ENST00000356141 GYS1P13807 737 aa20.78■□□□□ 0.92
NPAS3-202ENST00000356141 PDIA3P30101 505 aaKnown RBP20.78■□□□□ 0.92
NPAS3-202ENST00000356141 PRR5LQ6MZQ0 368 aa20.78■□□□□ 0.92
NPAS3-202ENST00000356141 GRPEL1Q9HAV7 217 aa20.78■□□□□ 0.92
NPAS3-202ENST00000356141 ZNF219Q9P2Y4 722 aaPredicted RBP20.78■□□□□ 0.92
NPAS3-202ENST00000356141 CTNNA3Q9UI47 895 aa20.78■□□□□ 0.92
NPAS3-202ENST00000356141 COL1A1P02452 1464 aaPredicted RBP20.78■□□□□ 0.92
NPAS3-202ENST00000356141 APBA3O96018 575 aa20.78■□□□□ 0.92
NPAS3-202ENST00000356141 MICU3Q86XE3 530 aa20.78■□□□□ 0.92
NPAS3-202ENST00000356141 IFNL3Q8IZI9 196 aa20.78■□□□□ 0.92
NPAS3-202ENST00000356141 TM4SF1P30408 202 aa20.77■□□□□ 0.92
NPAS3-202ENST00000356141 TXNRD1Q16881 649 aa20.77■□□□□ 0.92
NPAS3-202ENST00000356141 CMTR1Q8N1G2 835 aaKnown RBP20.77■□□□□ 0.92
NPAS3-202ENST00000356141 CARMIL3Q8ND23 1372 aa20.77■□□□□ 0.92
NPAS3-202ENST00000356141 UBE3CQ15386 1083 aa20.77■□□□□ 0.92
NPAS3-202ENST00000356141 ATRNO75882 1429 aa20.77■□□□□ 0.92
NPAS3-202ENST00000356141 SERPINB2P05120 415 aa20.77■□□□□ 0.91
NPAS3-202ENST00000356141 TRDNQ13061 729 aa20.77■□□□□ 0.91
NPAS3-202ENST00000356141 NCOA7Q8NI08 942 aa20.77■□□□□ 0.91
NPAS3-202ENST00000356141 AATFQ9NY61 560 aaKnown RBP eCLIP20.77■□□□□ 0.91
NPAS3-202ENST00000356141 THSD7AQ9UPZ6 1657 aa20.76■□□□□ 0.91
NPAS3-202ENST00000356141 AIFM3Q96NN9 605 aa20.76■□□□□ 0.91
NPAS3-202ENST00000356141 GSG1L2A8MUP6 293 aa20.76■□□□□ 0.91
NPAS3-202ENST00000356141 ZNF827Q17R98 1081 aa20.76■□□□□ 0.91
NPAS3-202ENST00000356141 NFXL1Q6ZNB6 911 aa20.76■□□□□ 0.91
NPAS3-202ENST00000356141 ZNF384Q8TF68 577 aa20.76■□□□□ 0.91
NPAS3-202ENST00000356141 ONECUT3O60422 494 aaPredicted RBP20.75■□□□□ 0.91
NPAS3-202ENST00000356141 NSUN7Q8NE18 718 aaKnown RBP20.75■□□□□ 0.91
NPAS3-202ENST00000356141 RPGRQ92834 1020 aaKnown RBP20.75■□□□□ 0.91
NPAS3-202ENST00000356141 LAMA4Q16363 1823 aa20.75■□□□□ 0.91
NPAS3-202ENST00000356141 BRD2P25440 801 aaKnown RBP20.75■□□□□ 0.91
NPAS3-202ENST00000356141 MCM5P33992 734 aa20.75■□□□□ 0.91
NPAS3-202ENST00000356141 ADD1P35611 737 aaKnown RBP20.75■□□□□ 0.91
NPAS3-202ENST00000356141 GRIK5Q16478 980 aa20.75■□□□□ 0.91
NPAS3-202ENST00000356141 MB21D2Q8IYB1 491 aaPredicted RBP20.75■□□□□ 0.91
NPAS3-202ENST00000356141 ZNF804BA4D1E1 1349 aa20.75■□□□□ 0.91
NPAS3-202ENST00000356141 FSD2A1L4K1 749 aa20.74■□□□□ 0.91
NPAS3-202ENST00000356141 DDR1Q08345 913 aa20.74■□□□□ 0.91
NPAS3-202ENST00000356141 PHKBQ93100 1093 aa20.74■□□□□ 0.91
NPAS3-202ENST00000356141 FBXW7Q969H0 707 aa20.74■□□□□ 0.91
NPAS3-202ENST00000356141 HIBADHP31937 336 aaKnown RBP20.74■□□□□ 0.91
NPAS3-202ENST00000356141 ZNF512BQ96KM6 892 aaPredicted RBP20.74■□□□□ 0.91
NPAS3-202ENST00000356141 GNL3LQ9NVN8 582 aaKnown RBP20.74■□□□□ 0.91
NPAS3-202ENST00000356141 HMGB1P09429 215 aaKnown RBP20.73■□□□□ 0.91
NPAS3-202ENST00000356141 SLC10A5Q5PT55 438 aa20.73■□□□□ 0.91
NPAS3-202ENST00000356141 RIMBP2O15034 1052 aa20.73■□□□□ 0.91
NPAS3-202ENST00000356141 UBE4AQ14139 1066 aa20.73■□□□□ 0.91
NPAS3-202ENST00000356141 DIXDC1Q155Q3 683 aa20.73■□□□□ 0.91
NPAS3-202ENST00000356141 NAA16Q6N069 864 aaPredicted RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms