RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 CBX8Q9HC52 389 aa26.01■■□□□ 1.75
NKX2-1-201ENST00000354822 ZMYM6O95789 1325 aa26■■□□□ 1.75
NKX2-1-201ENST00000354822 TCRBV5S4A2TA0A5A2 114 aa26■■□□□ 1.75
NKX2-1-201ENST00000354822 AP5Z1O43299 807 aa26■■□□□ 1.75
NKX2-1-201ENST00000354822 SPATA5Q8NB90 893 aa26■■□□□ 1.75
NKX2-1-201ENST00000354822 AIDAQ96BJ3 306 aa26■■□□□ 1.75
NKX2-1-201ENST00000354822 ORC3Q9UBD5 711 aaPredicted RBP26■■□□□ 1.75
NKX2-1-201ENST00000354822 ANGEL1Q9UNK9 670 aaKnown RBP26■■□□□ 1.75
NKX2-1-201ENST00000354822 GUCY1B3Q02153 619 aa26■■□□□ 1.75
NKX2-1-201ENST00000354822 MAP3K12Q12852 859 aa26■■□□□ 1.75
NKX2-1-201ENST00000354822 BRAPQ7Z569 592 aa26■■□□□ 1.75
NKX2-1-201ENST00000354822 ILDR1Q86SU0 546 aaPredicted RBP26■■□□□ 1.75
NKX2-1-201ENST00000354822 SMARCC1Q92922 1105 aaPredicted RBP26■■□□□ 1.75
NKX2-1-201ENST00000354822 CCDC152Q4G0S7 254 aa25.99■■□□□ 1.75
NKX2-1-201ENST00000354822 STRBPQ96SI9 672 aaKnown RBP25.99■■□□□ 1.75
NKX2-1-201ENST00000354822 LUZP1Q86V48 1076 aa25.99■■□□□ 1.75
NKX2-1-201ENST00000354822 TDRD7Q8NHU6 1098 aaKnown RBP25.99■■□□□ 1.75
NKX2-1-201ENST00000354822 TMEM87BQ96K49 555 aa25.99■■□□□ 1.75
NKX2-1-201ENST00000354822 R3HCC1Q9Y3T6 440 aaKnown RBP25.99■■□□□ 1.75
NKX2-1-201ENST00000354822 ME1P48163 572 aa25.98■■□□□ 1.75
NKX2-1-201ENST00000354822 ZNF165P49910 485 aa25.98■■□□□ 1.75
NKX2-1-201ENST00000354822 FAM160A1Q05DH4 1040 aa25.98■■□□□ 1.75
NKX2-1-201ENST00000354822 ITPK1Q13572 414 aa25.98■■□□□ 1.75
NKX2-1-201ENST00000354822 NBPF3Q9H094 633 aa25.98■■□□□ 1.75
NKX2-1-201ENST00000354822 RTL9Q8NET4 1388 aa25.98■■□□□ 1.75
NKX2-1-201ENST00000354822 DDX60Q8IY21 1712 aaKnown RBP25.98■■□□□ 1.75
NKX2-1-201ENST00000354822 ARAP2Q8WZ64 1704 aa25.98■■□□□ 1.75
NKX2-1-201ENST00000354822 PATL2C9JE40 543 aaKnown RBP25.97■■□□□ 1.75
NKX2-1-201ENST00000354822 KINO60870 393 aaKnown RBP25.97■■□□□ 1.75
NKX2-1-201ENST00000354822 CDKL5O76039 1030 aa25.97■■□□□ 1.75
NKX2-1-201ENST00000354822 ADALQ6DHV7 355 aa25.97■■□□□ 1.75
NKX2-1-201ENST00000354822 HELBQ8NG08 1087 aaPredicted RBP25.97■■□□□ 1.75
NKX2-1-201ENST00000354822 WWC3Q9ULE0 1092 aa25.97■■□□□ 1.75
NKX2-1-201ENST00000354822 CAMTA2O94983 1202 aa25.97■■□□□ 1.75
NKX2-1-201ENST00000354822 SNW1Q13573 536 aaKnown RBP25.97■■□□□ 1.75
NKX2-1-201ENST00000354822 FTOQ9C0B1 505 aaKnown RBP eCLIP25.97■■□□□ 1.75
NKX2-1-201ENST00000354822 TTC12Q9H892 705 aaPredicted RBP25.97■■□□□ 1.75
NKX2-1-201ENST00000354822 A0A1W2PQ27 194 aa25.96■■□□□ 1.75
NKX2-1-201ENST00000354822 A0A1W2PQ64 194 aa25.96■■□□□ 1.75
NKX2-1-201ENST00000354822 A0A1W2PQD8 194 aa25.96■■□□□ 1.75
NKX2-1-201ENST00000354822 UBAP1LF5GYI3 381 aa25.96■■□□□ 1.75
NKX2-1-201ENST00000354822 IGHMBP2P38935 993 aaKnown RBP25.96■■□□□ 1.75
NKX2-1-201ENST00000354822 CPLX2Q6PUV4 134 aaKnown RBP25.96■■□□□ 1.75
NKX2-1-201ENST00000354822 ENGASEQ8NFI3 743 aa25.96■■□□□ 1.75
NKX2-1-201ENST00000354822 ZNF830Q96NB3 372 aaPredicted RBP25.96■■□□□ 1.75
NKX2-1-201ENST00000354822 TBC1D10CQ8IV04 446 aa25.96■■□□□ 1.75
NKX2-1-201ENST00000354822 KCNG4Q8TDN1 519 aa25.96■■□□□ 1.75
NKX2-1-201ENST00000354822 POLR3EQ9NVU0 708 aa25.96■■□□□ 1.75
NKX2-1-201ENST00000354822 SH2B2O14492 632 aaPredicted RBP25.95■■□□□ 1.74
NKX2-1-201ENST00000354822 PPFIA3O75145 1194 aa25.95■■□□□ 1.74
NKX2-1-201ENST00000354822 YEATS4O95619 227 aa25.95■■□□□ 1.74
NKX2-1-201ENST00000354822 VPS72Q15906 364 aa25.95■■□□□ 1.74
NKX2-1-201ENST00000354822 MYH14Q7Z406 1995 aaKnown RBP25.95■■□□□ 1.74
NKX2-1-201ENST00000354822 NOLC1Q14978 699 aaKnown RBP eCLIP25.95■■□□□ 1.74
NKX2-1-201ENST00000354822 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.95■■□□□ 1.74
NKX2-1-201ENST00000354822 GOLPH3LQ9H4A5 285 aa25.95■■□□□ 1.74
NKX2-1-201ENST00000354822 METAP2P50579 478 aaKnown RBP eCLIP25.94■■□□□ 1.74
NKX2-1-201ENST00000354822 FSIP1Q8NA03 581 aa25.94■■□□□ 1.74
NKX2-1-201ENST00000354822 LINC00301Q8NCQ3 95 aa25.94■■□□□ 1.74
NKX2-1-201ENST00000354822 PCDHA7Q9UN72 937 aa25.94■■□□□ 1.74
NKX2-1-201ENST00000354822 ZNF831Q5JPB2 1677 aa25.93■■□□□ 1.74
NKX2-1-201ENST00000354822 GNAT2P19087 354 aa25.93■■□□□ 1.74
NKX2-1-201ENST00000354822 RASGRF1Q13972 1273 aa25.93■■□□□ 1.74
NKX2-1-201ENST00000354822 STX1AQ16623 288 aa25.93■■□□□ 1.74
NKX2-1-201ENST00000354822 FAM98CQ17RN3 349 aaKnown RBP25.93■■□□□ 1.74
NKX2-1-201ENST00000354822 CYB5R4Q7L1T6 521 aa25.93■■□□□ 1.74
NKX2-1-201ENST00000354822 MPNDQ8N594 471 aa25.93■■□□□ 1.74
NKX2-1-201ENST00000354822 MRPS27Q92552 414 aaKnown RBP25.93■■□□□ 1.74
NKX2-1-201ENST00000354822 DNAJC25Q9H1X3 360 aa25.93■■□□□ 1.74
NKX2-1-201ENST00000354822 STK38Q15208 465 aa25.93■■□□□ 1.74
NKX2-1-201ENST00000354822 SF3A1Q15459 793 aaKnown RBP25.93■■□□□ 1.74
NKX2-1-201ENST00000354822 SYNE3Q6ZMZ3 975 aa25.93■■□□□ 1.74
NKX2-1-201ENST00000354822 IFNL3Q8IZI9 196 aa25.93■■□□□ 1.74
NKX2-1-201ENST00000354822 MAGEB6Q8N7X4 407 aa25.93■■□□□ 1.74
NKX2-1-201ENST00000354822 NGLY1Q96IV0 654 aa25.93■■□□□ 1.74
NKX2-1-201ENST00000354822 CNNM2Q9H8M5 875 aa25.93■■□□□ 1.74
NKX2-1-201ENST00000354822 BCL9LQ86UU0 1499 aa25.92■■□□□ 1.74
NKX2-1-201ENST00000354822 COL5A3P25940 1745 aaPredicted RBP25.92■■□□□ 1.74
NKX2-1-201ENST00000354822 KCNQ2O43526 872 aa25.92■■□□□ 1.74
NKX2-1-201ENST00000354822 MYSM1Q5VVJ2 828 aa25.92■■□□□ 1.74
NKX2-1-201ENST00000354822 SGMS1Q86VZ5 419 aa25.92■■□□□ 1.74
NKX2-1-201ENST00000354822 NAPBQ9H115 298 aa25.92■■□□□ 1.74
NKX2-1-201ENST00000354822 SEC31BQ9NQW1 1179 aa25.92■■□□□ 1.74
NKX2-1-201ENST00000354822 NIP7Q9Y221 180 aaKnown RBP eCLIP25.92■■□□□ 1.74
NKX2-1-201ENST00000354822 ZNF652Q9Y2D9 606 aa25.92■■□□□ 1.74
NKX2-1-201ENST00000354822 C8orf37Q96NL8 207 aa25.92■■□□□ 1.74
NKX2-1-201ENST00000354822 SPTLC3Q9NUV7 552 aa25.92■■□□□ 1.74
NKX2-1-201ENST00000354822 NTSR2O95665 410 aa25.91■■□□□ 1.74
NKX2-1-201ENST00000354822 IGDCC4Q8TDY8 1250 aa25.91■■□□□ 1.74
NKX2-1-201ENST00000354822 MYO5AQ9Y4I1 1855 aaKnown RBP25.91■■□□□ 1.74
NKX2-1-201ENST00000354822 FAM177BA6PVY3 158 aa25.9■■□□□ 1.74
NKX2-1-201ENST00000354822 B4E1Z4 1266 aa25.9■■□□□ 1.74
NKX2-1-201ENST00000354822 LIFRP42702 1097 aa25.9■■□□□ 1.74
NKX2-1-201ENST00000354822 OTUD7BQ6GQQ9 843 aa25.9■■□□□ 1.74
NKX2-1-201ENST00000354822 APOA5Q6Q788 366 aa25.9■■□□□ 1.74
NKX2-1-201ENST00000354822 PLA2G4DQ86XP0 818 aa25.9■■□□□ 1.74
NKX2-1-201ENST00000354822 NACAP1Q9BZK3 213 aa25.9■■□□□ 1.74
NKX2-1-201ENST00000354822 TRIM5Q9C035 493 aa25.9■■□□□ 1.74
NKX2-1-201ENST00000354822 ANO10Q9NW15 660 aa25.9■■□□□ 1.74
NKX2-1-201ENST00000354822 GOLGA6L19H0YKK7 550 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms